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List of works by Anke van den Berg

5′-UTRFASmutation pattern and frequency in nodal diffuse large B-cell lymphoma similar to normal germinal center B cells

scientific article published on 01 May 2007

A Novel Risk Locus at 6p21.3 for Epstein-Barr Virus-Positive Hodgkin Lymphoma

scientific article published on 24 September 2015

A chronic obstructive pulmonary disease related signature in squamous cell lung cancer

scientific article

A genome-wide association study of Hodgkin's lymphoma identifies new susceptibility loci at 2p16.1 (REL), 8q24.21 and 10p14 (GATA3)

scientific journal article

A high throughput experimental approach to identify miRNA targets in human cells.

scientific article

A super-SILAC based proteomics analysis of diffuse large B-cell lymphoma-NOS patient samples to identify new proteins that discriminate GCB and non-GCB lymphomas

scientific article published on 11 October 2019

AGO2 RNA Immunoprecipitation Reveals Distinct miRNA Targetomes of Primary Burkitt Lymphoma Tumors and Normal B Cells.

scientific article published on 16 February 2018

Age-Associated Differences in MiRNA Signatures Are Restricted to CD45RO Negative T Cells and Are Associated with Changes in the Cellular Composition, Activation and Cellular Ageing

scientific article published on 11 September 2015

Age-related gene and miRNA expression changes in airways of healthy individuals

article

An All-In-One Transcriptome-Based Assay to Identify Therapy-Guiding Genomic Aberrations in Nonsmall Cell Lung Cancer Patients

scientific article published on 01 October 2020

Analysis of Released Circulating Tumor Cells During Surgery for Non-Small Cell Lung Cancer

scientific article published on 26 November 2019

Analysis of serum immune markers in seropositive and seronegative rheumatoid arthritis and in high-risk seropositive arthralgia patients

scientific article published on 18 May 2016

Argonaute 2 immunoprecipitation revealed large tumor suppressor kinase 1 as a novel proapoptotic target of miR-21 in T cells

scientific article published on 11 January 2017

Autoimmune lymphoproliferative syndrome in a patient with a new minimal deletion in the death domain of the FAS gene

scientific article

Biomarkers for evaluation of treatment response in classical Hodgkin lymphoma: comparison of sGalectin-1, sCD163 and sCD30 with TARC.

scientific article published on 9 September 2016

Brain death induces inflammation in the donor intestine.

scientific article

CD57+ T-cells are a subpopulation of T-follicular helper cells in nodular lymphocyte predominant Hodgkin lymphoma

scientific article published on 15 September 2015

CD58 mutations are common in Hodgkin lymphoma cell lines and loss of CD58 expression in tumor cells occurs in Hodgkin lymphoma patients who relapse

scientific article published on 28 July 2016

CX Chemokine Receptor 7 Contributes to Survival of KRAS-Mutant Non-Small Cell Lung Cancer upon Loss of Epidermal Growth Factor Receptor

scientific article published on 30 March 2019

Cellular localization and processing of primary transcripts of exonic microRNAs.

scientific article

Characterization of the Microenvironment of Nodular Lymphocyte Predominant Hodgkin Lymphoma

scientific article published on 16 December 2016

Chromosomal aberrations in follicular thyroid carcinoma

scientific article published on 01 July 1991

Chronic Obstructive Pulmonary Disease Is Not Associated with KRAS Mutations in Non-Small Cell Lung Cancer

scientific article

Cigarette smoke-induced emphysema: A role for the B cell?

scientific article

Circulating miRNAs in patients with Barrett's esophagus, high-grade dysplasia and esophageal adenocarcinoma

scientific article published on 01 December 2018

Combined PD-1 and JAK1/2 inhibition in refractory primary mediastinal B-cell lymphoma.

scientific article

Combined loss of HLA I and HLA II expression is more common in the non-GCB type of diffuse large B cell lymphoma

scientific article

Comprehensive analysis of miRNA expression in T-cell subsets of rheumatoid arthritis patients reveals defined signatures of naive and memory Tregs

scientific article published on 09 January 2014

Copy number alterations assessed at the single-cell level revealed mono- and polyclonal seeding patterns of distant metastasis in a small cell lung cancer patient.

scientific article

Correlation of microRNA-16, microRNA-21 and microRNA-101 expression with cyclooxygenase-2 expression and angiogenic factors in cirrhotic and noncirrhotic human hepatocellular carcinoma

scientific article

Corrigendum to “Hodgkin Lymphoma Cell Lines Are Characterized by a Specific miRNA Expression Profile.” Neoplasia 2009, Feb;11(2):167-176.

scientific article published on 28 January 2018

Current Smoking is Associated with Decreased Expression of miR-335-5p in Parenchymal Lung Fibroblasts

scientific article published on 18 October 2019

Current smoking-specific gene expression signature in normal bronchial epithelium is enhanced in squamous cell lung cancer

scientific article

Cytokine gene expression profile distinguishes CD4+/CD57+ T cells of the nodular lymphocyte predominance type of Hodgkin's lymphoma from their tonsillar counterparts

article

Cytoplasmic p21 expression levels determine cisplatin resistance in human testicular cancer.

scientific article published on September 2010

Development of lymphoma in Autoimmune Lymphoproliferative Syndrome (ALPS) and its relationship to Fas gene mutations

scientific article

Dichotomous ALK-IHC Is a Better Predictor for ALK Inhibition Outcome than Traditional ALK-FISH in Advanced Non-Small Cell Lung Cancer

scientific article

Differential expression and distribution of epithelial adhesion molecules in non-small cell lung cancer and normal bronchus.

scientific article

Differential miRNA Expression Profiles in Cumulus and Mural Granulosa Cells from Human Pre-ovulatory Follicles

scientific article published on 01 January 2019

Dual role of miR-21 in CD4+ T-cells: activation-induced miR-21 supports survival of memory T-cells and regulates CCR7 expression in naive T-cells

scientific article published on October 2013

Embryological signaling pathways in Barrett's metaplasia development and malignant transformation; mechanisms and therapeutic opportunities.

scientific article

Emerging roles for long noncoding RNAs in B-cell development and malignancy

scientific article

Epidemiology of classical Hodgkin lymphoma and its association with Epstein Barr virus in Northern China.

scientific article

Erratum: Lydia Visser et al. Characterization of the Microenvironment of Nodular Lymphocyte Predominant Hodgkin Lymphoma, Int. J. Mol. Sci. 2016, 17, 2127.

scientific article

Expression of CD1d and presence of invariant NKT cells in classical Hodgkin lymphoma

scientific article published on 01 July 2010

Expression of HLA class I and HLA class II by tumor cells in Chinese classical Hodgkin lymphoma patients

scientific article

Expression of miR-21 and its targets (PTEN, PDCD4, TM1) in flat epithelial atypia of the breast in relation to ductal carcinoma in situ and invasive carcinoma

scientific article

Frequent mutated B2M, EZH2, IRF8, and TNFRSF14 in primary bone diffuse large B-cell lymphoma reflect a GCB phenotype

scientific article published on 01 October 2021

Functional Studies on Primary Tubular Epithelial Cells Indicate a Tumor Suppressor Role of SETD2 in Clear Cell Renal Cell Carcinoma

scientific article published on 26 May 2016

GATA6 expression in Barrett's oesophagus and oesophageal adenocarcinoma.

scientific article published on 16 October 2014

Gene expression analysis of dendritic/Langerhans cells and Langerhans cell histiocytosis.

scientific article published in August 2006

Gene expression profiling of microdissected Hodgkin Reed-Sternberg cells correlates with treatment outcome in classical Hodgkin lymphoma

scientific article

Generation of miRNA sponge constructs.

scientific article published on 23 July 2012

Genetic associations in classical hodgkin lymphoma: a systematic review and insights into susceptibility mechanisms

scientific article published on 09 September 2014

Genome-wide association study of classical Hodgkin lymphoma and Epstein-Barr virus status-defined subgroups

scientific journal article

Genomic Aberrations in Crizotinib Resistant Lung Adenocarcinoma Samples Identified by Transcriptome Sequencing

scientific article

Genomic aberrations in squamous cell lung carcinoma related to lymph node or distant metastasis

Global correlation of genome and transcriptome changes in classical Hodgkin lymphoma

scientific article published in March 2007

HLA associations in classical Hodgkin lymphoma: EBV status matters.

scientific article

HLA class II expression by Hodgkin Reed-Sternberg cells is an independent prognostic factor in classical Hodgkin's lymphoma.

scientific article published on 29 May 2007

HLA dependent immune escape mechanisms in B-cell lymphomas: Implications for immune checkpoint inhibitor therapy?

scientific article

HLA expression and HLA type associations in relation to EBV status in Hispanic Hodgkin lymphoma patients

scientific article

HLA-A*02:07 is a protective allele for EBV negative and a susceptibility allele for EBV positive classical Hodgkin lymphoma in China

scientific article

HLA-G protein expression as a potential immune escape mechanism in classical Hodgkin’s lymphoma

scientific article published on 01 March 2008

Heterogeneous Pattern of Dependence on Anti-Apoptotic BCL-2 Family Proteins upon CHOP Treatment in Diffuse Large B-Cell Lymphoma

scientific article published on 30 November 2019

Hodgkin lymphoma cell lines are characterized by a specific miRNA expression profile

scientific article

Hodgkin's lymphoma associated T-cells exhibit a transcription factor profile consistent with distinct lymphoid compartments

scientific article

Identification of Two Protein-Signaling States Delineating Transcriptionally Heterogeneous Human Medulloblastoma

scientific article published in March 2018

Identification of relevant drugable targets in diffuse large B-cell lymphoma using a genome-wide unbiased CD20 guilt-by association approach.

scientific article published on 28 February 2018

Immuno-miRs: critical regulators of T-cell development, function and ageing

scientific article published on January 2015

Increased miR-142-3p Expression Might Explain Reduced Regulatory T Cell Function in Granulomatosis With Polyangiitis

scientific article published on 12 September 2019

Induction of glomerular alkaline phosphatase after challenge with lipopolysaccharide

scientific article published on 01 June 2003

Inhibition of the miR-155 target NIAM phenocopies the growth promoting effect of miR-155 in B-cell lymphoma

scientific article published on 19 October 2015

Insulin-like growth factor 1 receptor is a prognostic factor in classical Hodgkin lymphoma

scientific article

Interaction between host T cells and Reed-Sternberg cells in Hodgkin lymphomas.

scientific article

Intricate crosstalk between MYC and non-coding RNAs regulates hallmarks of cancer

scientific article published on 05 December 2018

Involvement of MicroRNAs in the Aging-Related Decline of CD28 Expression by Human T Cells.

scientific article published on 18 June 2018

Involvement of multiple loci on chromosome 3 in renal cell cancer development

scientific article published on June 1997

KRAS Mutation as a Resistance Mechanism to BRAF/MEK Inhibition in NSCLC

scientific article published on 01 December 2018

Lack of BIC and microRNA miR-155 expression in primary cases of Burkitt lymphoma.

scientific article

Latent Epstein-Barr virus infection of tumor cells in classical Hodgkin's lymphoma predicts adverse outcome in older adult patients

scientific article published on 26 May 2009

Long Noncoding RNA Expression Profiling in Normal B-Cell Subsets and Hodgkin Lymphoma Reveals Hodgkin and Reed-Sternberg Cell-Specific Long Noncoding RNAs

scientific article published on 13 July 2016

Long noncoding RNAs as a novel component of the Myc transcriptional network

scientific article published on 17 February 2015

Lymphadenopathy driven by TCR-V8V1 T-cell expansion in FAS-related autoimmune lymphoproliferative syndrome

scientific article published on 27 June 2017

MHC class II transactivator CIITA is a recurrent gene fusion partner in lymphoid cancers

scientific article

Marked TGF-β-regulated miRNA expression changes in both COPD and control lung fibroblasts

scientific article published on 03 December 2019

Maternal smoking during pregnancy decreases Wnt signalling in neonatal mice

scientific article published on 01 June 2010

MiR-378a-3p Is Critical for Burkitt Lymphoma Cell Growth

scientific article published on 27 November 2020

MiRNA profiling in B non-Hodgkin lymphoma: a MYC-related miRNA profile characterizes Burkitt lymphoma

scientific article published on 15 March 2010

MiR‐17/106b seed family regulates p21 in Hodgkin's lymphoma ⬇️

scientific article published on September 26, 2011

MicroRNA High Throughput Loss-of-Function Screening Reveals an Oncogenic Role for miR-21-5p in Hodgkin Lymphoma

scientific article published on 05 September 2018

MicroRNA profiling of human primary macrophages exposed to dengue virus identifies miRNA-3614-5p as antiviral and regulator of ADAR1 expression

scientific article published on 18 October 2017

MicroRNAs, macrocontrol: regulation of miRNA processing

scientific article published on 27 April 2010

Microarray amplification bias: loss of 30% differentially expressed genes due to long probe - poly(A)-tail distances

scientific article

Multiple HLA class I and II associations in classical Hodgkin lymphoma and EBV status defined subgroups

scientific article published on 14 September 2011

Mutation patterns in small cell and non-small cell lung cancer patients suggest a different level of heterogeneity between primary and metastatic tumors.

scientific article published on 17 December 2016

Mutational Evolution in Relapsed Diffuse Large B-Cell Lymphoma

scientific article published on 20 November 2018

Mutations in EMT-Related Genes in ALK Positive Crizotinib Resistant Non-Small Cell Lung Cancers.

scientific article

NGS-Based High-Throughput Screen to Identify MicroRNAs Regulating Growth of B-Cell Lymphoma

scientific article published on 01 January 2019

Non-Coding RNAs in Cancer Radiosensitivity: MicroRNAs and lncRNAs as Regulators of Radiation-Induced Signaling Pathways

scientific article published on 23 June 2020

NormalFHIT transcripts in renal cell cancer- and lung cancer-derived cell lines, including a cell line with a homozygous deletion in the FRA3B region ⬇️

scientific article published on August 1, 1997

Overall survival in EGFR mutated non-small-cell lung cancer patients treated with afatinib after EGFR TKI and resistant mechanisms upon disease progression

scientific article published on 30 August 2017

PML nuclear bodies and SATB1 are associated with HLA class I expression in EBV+ Hodgkin lymphoma

scientific article

Plasma thymus and activation-regulated chemokine as an early response marker in classical Hodgkin's lymphoma ⬇️

scientific article published on November 4, 2011

Prolonged survival of rat islet xenografts in mice after CD45RB monotherapy

scientific article published in February 2004

Protease activity of plasma hemopexin

scientific article published on August 2005

Proteomics Based Identification of Proteins with Deregulated Expression in B Cell Lymphomas.

scientific article published on 11 January 2016

Proteomics analysis of Hodgkin lymphoma: identification of new players involved in the cross-talk between HRS cells and infiltrating lymphocytes

scientific article published on 10 December 2007

RT-PCR and immunohistochemical evaluation of sentinel lymph nodes after in vivo mapping with Patent Blue V in colon cancer patients.

scientific article published on September 2006

Randomized, placebo-controlled phase III study of docetaxel plus carboplatin with celecoxib and cyclooxygenase-2 expression as a biomarker for patients with advanced non-small-cell lung cancer: the NVALT-4 study

scientific article

Rapid BRAF mutation tests in patients with advanced melanoma: comparison of immunohistochemistry, Droplet Digital PCR, and the Idylla Mutation Platform.

scientific article

Rapid generation of microRNA sponges for microRNA inhibition

scientific article published in 2012

Recommendations for the clinical interpretation and reporting of copy number gains using gene panel NGS analysis in routine diagnostics

scientific article published on 19 March 2019

Recurrent astrocytoma in a child: a report of cytogenetics and TP53 gene mutation screening

scientific article published on July 2000

Regulation of pri-microRNA BIC transcription and processing in Burkitt lymphoma.

scientific article published on 18 December 2006

Resistance mechanisms after tyrosine kinase inhibitors afatinib and crizotinib in non-small cell lung cancer, a review of the literature

scientific article

Rheumatoid Arthritis, Immunosenescence and the Hallmarks of Aging

scientific article

SETD2: an epigenetic modifier with tumor suppressor functionality

scientific article

SF Treg cells transcribing high levels of Bcl-2 and microRNA-21 demonstrate limited apoptosis in RA.

scientific article published on 21 October 2014

Serum chemokine levels in Hodgkin lymphoma patients: highly increased levels of CCL17 and CCL22

scientific article published on 01 March 2008

Single-cell sequencing reveals karyotype heterogeneity in murine and human malignancies

scientific article (publication date: 2016)

Small RNA sequencing reveals a comprehensive miRNA signature of BRCA1-associated high-grade serous ovarian cancer

scientific article published on 5 April 2016

Specific expression of miR-17-5p and miR-127 in testicular and central nervous system diffuse large B-cell lymphoma

scientific article (publication date: April 2009)

Strongly enhanced IL-10 production using stable galectin-1 homodimers

article

Studying microRNAs in lymphoma

scientific article published on 01 January 2013

TP53 gene mutations in Hodgkin lymphoma are infrequent and not associated with absence of Epstein-Barr virus ⬇️

scientific article published on October 1, 2001

Targeted sequencing of circulating cell-free DNA in stage II-III resectable oesophageal squamous cell carcinoma patients

scientific article published on 20 August 2019

The CD4+CD26- T-cell population in classical Hodgkin's lymphoma displays a distinctive regulatory T-cell profile

scientific article

The Microenvironment in Epstein-Barr Virus-Associated Malignancies.

scientific article published on 13 April 2018

The human leukocyte antigen class I region is associated with EBV-positive Hodgkin's lymphoma: HLA-A and HLA complex group 9 are putative candidate genes.

scientific article published in November 2006

The miR-26b-5p/KPNA2 Axis Is an Important Regulator of Burkitt Lymphoma Cell Growth

scientific article published on 04 June 2020

The microenvironment in classical Hodgkin lymphoma: an actively shaped and essential tumor component.

scientific article published on 15 July 2013

The microenvironment of classical Hodgkin lymphoma: heterogeneity by Epstein-Barr virus presence and location within the tumor

scientific article

The mutational landscape of Hodgkin lymphoma cell lines determined by whole-exome sequencing

scientific article published on 20 June 2014

Toll-like receptors in the pathogenesis of human B cell malignancies

scientific article

Tuberous sclerosis complex is required for tumor maintenance in MYC-driven Burkitt's lymphoma

scientific article published on 20 September 2018

Tumour necrosis as assessed with 18F-FDG PET is a potential prognostic marker in diffuse large B cell lymphoma independent of MYC rearrangements

scientific article published on 26 April 2019

WEE1 Inhibition Enhances Anti-Apoptotic Dependency as a Result of Premature Mitotic Entry and DNA Damage

scientific article published on 07 November 2019

ZDHHC11 and ZDHHC11B are critical novel components of the oncogenic MYC-miR-150-MYB network in Burkitt lymphoma.

scientific article published on 23 March 2017

miR-24-3p Is Overexpressed in Hodgkin Lymphoma and Protects Hodgkin and Reed-Sternberg Cells from Apoptosis.

scientific article

miRNA profiling of B-cell subsets: specific miRNA profile for germinal center B cells with variation between centroblasts and centrocytes

scientific article published on 6 April 2009

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