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List of works by Daniel Vaulot

A novel species of the marine cyanobacterium Acaryochloris with a unique pigment content and lifestyle.

scientific article

A simple method to preserve oceanic phytoplankton for flow cytometric analyses

scientific article published in September 1989

A simple model of the growth of phytoplankton populations in light/dark cycles

article

A single species, Micromonas pusilla (Prasinophyceae), dominates the eukaryotic picoplankton in the Western English Channel

scientific article

Ability of a “minimum” microbial food web model to reproduce response patterns observed in mesocosms manipulated with N and P, glucose, and Si

article

Abundance and cellular characteristics of marine Synechococcus spp. in the dilution zone of the Changjiang (Yangtze River, China)

article

An 18S V4 rRNA metabarcoding dataset of protist diversity in the Atlantic inflow to the Arctic Ocean, through the year and down to 1000 m depth

scientific article published on 26 October 2021

An annotated checklist of Marine Phytoplankton taxa at the SOMLIT-Astan time series off Roscoff (Western English Channel, France): data collected from 2000 to 2010 ⬇️

scientific article published in 2013

An improved protocol for flow cytometry analysis of phytoplankton cultures and natural samples

scientific article

Analysis of the hli gene family in marine and freshwater cyanobacteria

scientific article published on October 2002

Annual variability of phytoplankton and bacteria in the subtropical North Pacific Ocean at Station ALOHA during the 1991–1994 ENSO event

scholarly article by Lisa Campbell et al published February 1997 in Deep-Sea Research. Part 1: Oceanographic Research Papers

Are autotrophs less diverse than heterotrophs in marine picoplankton?

scientific article published on 01 June 2002

Author Correction: Chloropicophyceae, a new class of picophytoplanktonic prasinophytes ⬇️

scientific article published on 17 April 2020

BOLIDOMONAS: A NEW GENUS WITH TWO SPECIES BELONGING TO A NEW ALGAL CLASS, THE BOLIDOPHYCEAE (HETEROKONTA)

article published in 1999

Benthic protists: the under-charted majority

scientific article

Bolidophyceae, a Sister Picoplanktonic Group of Diatoms – A Review

scholarly article

CELL SIZE DIFFERENTIATION IN THE BLOOM-FORMING DINOFLAGELLATE GYMNODINIUM CF. NAGASAKIENSE1

CHARACTERIZATION OF OCEANIC PHOTOSYNTHETIC PICOEUKARYOTES BY FLOW CYTOMETRY1

scholarly article by Nathalie Simon et al published December 1994 in Journal of Phycology

Cell cycle distributions of prochlorophytes in the north western Mediterranean Sea

Cell cycle regulation by light in Prochlorococcus strains.

scientific article

Cell-cycle response to nutrient starvation in two phytoplankton species, Thalassiosira weissflogii and Hymenomonas carterae

article

Characterization of the single psbA gene of Prochlorococcus marinus CCMP 1375 (Prochlorophyta).

scientific article published in March 1995

Chimeric viruses blur the borders between the major groups of eukaryotic single-stranded DNA viruses

scientific article

Chloropicophyceae, a new class of picophytoplanktonic prasinophytes.

scientific article published on 25 October 2017

Clade-specific 16S ribosomal DNA oligonucleotides reveal the predominance of a single marine Synechococcus clade throughout a stratified water column in the Red Sea.

scientific article

Comparison of coastal phytoplankton composition estimated from the V4 and V9 regions of the 18S rRNA gene with a focus on photosynthetic groups and especially Chlorophyta

scientific article

Composition and temporal variability of picoeukaryote communities at a coastal site of the English Channel from 18S rDNA sequences

scientific article

Composition of the summer photosynthetic pico and nanoplankton communities in the Beaufort Sea assessed by T-RFLP and sequences of the 18S rRNA gene from flow cytometry sorted samples

scientific article

Contrasting pelagic ecosystem functioning in eastern and western Baffin Bay revealed by trophic network modeling

scientific article published in 2020

DIEL PATTERNS OF GROWTH AND DIVISION IN MARINE PICOPLANKTON IN CULTURE

article

Diel expression of cell cycle-related genes in synchronized cultures of Prochlorococcus sp. strain PCC 9511. ⬇️

scientific article

Distribution of eukaryotic plankton in the English Channel and the North Sea in summer

article

Distribution of micro-organisms along a transect in the South-East Pacific Ocean (BIOSOPE cruise) using epifluorescence microscopy

scientific article published in 2008

Diversity and Ecology of Eukaryotic Marine Phytoplankton

scholarly article by Fabrice Not et al published 2012 in Advances in Botanical Research

Diversity and biogeography of planktonic diatoms in Svalbard fjords: The role of dispersal and Arctic endemism in phytoplankton community structuring

scientific article published in 2022

Diversity and distribution of haptophytes revealed by environmental sequencing and metabarcoding – a review

scientific article published on 28 April 2016

Diversity and ecology of green microalgae in marine systems: an overview based on 18S rRNA gene sequences

scientific article published in 2016

Diversity and oceanic distribution of prasinophytes clade VII, the dominant group of green algae in oceanic waters.

scientific article published on 25 October 2016

Diversity and oceanic distribution of the Parmales (Bolidophyceae), a picoplanktonic group closely related to diatoms

scientific article

Diversity of active marine picoeukaryotes in the Eastern Mediterranean Sea unveiled using photosystem-II psbA transcripts

scientific article published on 18 March 2010

Diversity of cultured photosynthetic flagellates in the northeast Pacific and Arctic Oceans in summer

article

Diversity of picoplanktonic prasinophytes assessed by direct nuclear SSU rDNA sequencing of environmental samples and novel isolates retrieved from oceanic and coastal marine ecosystems

scientific article

Ecotype diversity in the marine picoeukaryote Ostreococcus (Chlorophyta, Prasinophyceae)

scientific article

Effects of high light on transcripts of stress-associated genes for the cyanobacteria Synechocystis sp. PCC 6803 and Prochlorococcus MED4 and MIT9313.

scientific article published on May 2004

Estimating microbial populations by flow cytometry: Comparison between instruments

article

Eukaryotic picoplankton communities of the Mediterranean Sea in summer assessed by molecular approaches (DGGE, TTGE, QPCR).

scientific article published in March 2006

Evaluating the ribosomal internal transcribed spacer (ITS) as a candidate dinoflagellate barcode marker

scientific article published in 2012

FLOW CYTOMETRIC ANALYSIS OF SPERMATOGENESIS IN THE DIATOM THALASSIOSIRA WEISSFLOGII (BACILLARIOPHYCEAE)1

FLOW CYTOMETRIC ANALYSIS OF SPERMATOGENESIS IN THE DIATOM THALASSIOSIRA WEISSFLOGII (BACILLARIOPHYCEAE)1

article

Flow cytometry in oceanography: Recent developments

scholarly article by Daniel Vaulot published in January 1992

GROWTH AND CELL CYCLE OF TWO CLOSELY RELATED RED TIDE-FORMING DINOFLAGELLATES: GYMNODINIUM NAGASAKIENSE AND G. CF. NAGASAKIENSE1

Genetic characterisation of Emiliania huxleyi (Haptophyta)

Global patterns and rates of habitat transitions across the eukaryotic tree of life

scientific article published in 2022

Global phylogeography of marine Synechococcus and Prochlorococcus reveals a distinct partitioning of lineages among oceanic biomes.

scientific article published on 27 September 2007

Green Edge ice camp campaigns: understanding the processes controlling the under-ice Arctic phytoplankton spring bloom

scientific article published in 2020

Green microalgae in marine coastal waters: The Ocean Sampling Day (OSD) dataset

scientific article published in Scientific Reports

Groups without cultured representatives dominate eukaryotic picophytoplankton in the oligotrophic South East Pacific Ocean

scientific article

Hemiselmis aquamarina sp. nov. (Cryptomonadales, Cryptophyceae), A Cryptophyte with A Novel Phycobiliprotein Type (Cr-PC 564)

scholarly article published in 2021

High contribution of Rhizaria (Radiolaria) to vertical export in the California Current Ecosystem revealed by DNA metabarcoding

scientific article published on 11 December 2018

IDENTIFICATION OF BACTERIA ASSOCIATED WITH DINOFLAGELLATES (DINOPHYCEAE) ALEXANDRIUM SPP. USING TYRAMIDE SIGNAL AMPLIFICATION-FLUORESCENT IN SITU HYBRIDIZATION AND CONFOCAL MICROSCOPY1

article by Isabelle C. Biegala et al published April 2002 in Journal of Phycology

IDENTIFICATION OF THE CLASS PRYMNESIOPHYCEAE AND THE GENUS PHAEOCYSTIS WITH RIBOSOMAL RNA-TARGETED NUCLEIC ACID PROBES DETECTED BY FLOW CYTOMETRY1

scientific article published on 18 October 2004

Improvement of phytoplankton culture isolation using single cell sorting by flow cytometry

scientific article

Introduction to the special section bio-optical and biogeochemical conditions in the South East Pacific in late 2004: the BIOSOPE program

scientific article published in 2008

Light and dark control of the cell cycle in two marine phytoplankton species

article

Lotharella reticulosa sp. nov.: A Highly Reticulated Network Forming Chlorarachniophyte from the Mediterranean Sea ⬇️

scientific article published on April 15, 2011

MORPHOLOGICAL AND NUCLEAR ANALYSIS OF THE BLOOM-FORMING DINOFLAGELLATES GYRODINIUM CF. AUREOLUM AND GYMNODINIUM NAGASAKIENSE

MORPHOLOGY, PLOIDY, PIGMENT COMPOSITION, AND GENOME SIZE OF CULTURED STRAINS OF PHAEOCYSTIS (PRYMNESIOPHYCEAE)1

article

Mantoniella beaufortii and Mantoniella baffinensis sp. nov. (Mamiellales, Mamiellophyceae), two new green algal species from the high arctic1

scientific article published on 17 November 2019

Mapping of picoeucaryotes in marine ecosystems with quantitative PCR of the 18S rRNA gene

scientific article published on 22 December 2004

Marine phytoplankton distributions measured using shipboard flow cytometry

scholarly article by R.J. Olson et al published October 1985 in Deep-sea research. Part A, Oceanographic research papers

Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing

scientific article published on 28 June 2015

Metagenome sequencing of the microbial community of a solar saltern crystallizer pond at cáhuil lagoon, chile.

scientific article published on 13 November 2014

Metagenomes of the picoalga Bathycoccus from the Chile coastal upwelling

scientific article

Molecular analyses of protists in long-term observation programmes—current status and future perspectives

scholarly article

Morphological and genetic diversity of Beaufort Sea diatoms with high contributions from the Chaetoceros neogracilis species complex

scientific article published on 3 November 2016

No evidence of phago-mixotropy in Micromonas polaris (Mamiellophyceae), the dominant picophytoplankton species in the Arctic

scientific article published on 04 January 2021

Novel diversity within marine Mamiellophyceae (Chlorophyta) unveiled by metabarcoding

Novel diversity within marine Mamiellophyceae (Chlorophyta) unveiled by metabarcoding

scientific article published on 26 March 2019

PLOIDY ANALYSIS OF THE TWO MOTILE FORMS OF CHRYSOCHROMULINA POLYLEPIS (PRYMNESIOPHYCEAE)1

scientific article published on 18 October 2004

Partenskyella glossopodia gen. et sp. nov., the first report of a Chlorarachniophyte that lacks a pyrenoid.

scientific article

Photoacclimation of Prochlorococcus sp. (Prochlorophyta) Strains Isolated from the North Atlantic and the Mediterranean Sea.

scientific article

Photosymbiosis in Marine Pelagic Environments

article published in 2016

Photosynthetic picoeukaryote community structure in the South East Pacific Ocean encompassing the most oligotrophic waters on Earth

scientific article published on 5 August 2009

Photosynthetic picoplankton community structure in the subtropical North Pacific Ocean near Hawaii (station ALOHA)

scholarly article by Lisa Campbell & Daniel Vaulot published October 1993 in Deep-Sea Research. Part 1: Oceanographic Research Papers

Photosynthetic pigments of oceanic Chlorophyta belonging to prasinophytes clade VII.

scientific article published on 19 January 2016

PhytoREF: a reference database of the plastidial 16S rRNA gene of photosynthetic eukaryotes with curated taxonomy.

scientific article published on 5 March 2015

Phytoplankton distribution and grazing near coral reefs

scientific article published in 1998

Pico and nanoplankton abundance and carbon stocks along the Brazilian Bight.

scientific article published on 10 November 2016

Picobiliphytes: a marine picoplanktonic algal group with unknown affinities to other eukaryotes

scientific article

Picophytoplankton biomass distribution in the global ocean

scientific article published in 2012

Picoplankton diversity in the South-East Pacific Ocean from cultures

scientific article published in 2008

Plankton taxonomy in the computer age ⬇️

Plastid 16S rRNA gene diversity among eukaryotic picophytoplankton sorted by flow cytometry from the South Pacific Ocean

scientific article

Prasinoderma singularis sp. nov. (Prasinophyceae, Chlorophyta), a solitary coccoid Prasinophyte from the South-East Pacific Ocean

scientific article

Protistan assemblages across the Indian Ocean, with a specific emphasis on the picoeukaryotes

Pseudo-nitzschia arctica sp. nov., a new cold-water cryptic Pseudo-nitzschia species within the P. pseudodelicatissima complex

scientific article

Quantitative assessment of picoeukaryotes in the natural environment by using taxon-specific oligonucleotide probes in association with tyramide signal amplification-fluorescence in situ hybridization and flow cytometry.

scientific article

Revision of the Genus Micromonas Manton et Parke (Chlorophyta, Mamiellophyceae), of the Type Species M. pusilla (Butcher) Manton & Parke and of the Species M. commoda van Baren, Bachy and Worden and Description of Two New Species Based on the Geneti

scientific article published on 14 September 2017

Rhythmicity of coastal marine picoeukaryotes, bacteria and archaea despite irregular environmental perturbations

scientific article published on 25 September 2018

Short timescale dynamics of phytoplankton in Fildes Bay, Antarctica

scholarly article by Claudia Egas et al published 31 January 2017 in Antarctic Science

Simultaneous estimates ofsynechococcus spp. Growth and grazing mortality rates in the English Channel

article

Small eukaryotic phytoplankton communities in tropical waters off Brazil are dominated by symbioses between Haptophyta and nitrogen-fixing cyanobacteria.

scientific article published on 9 February 2018

Structure and seasonal dynamics of the eukaryotic picophytoplankton community in a wind-driven coastal upwelling ecosystem

article

Survey of the green picoalga Bathycoccus genomes in the global ocean

scientific article

THE CHITINOUS NATURE OF FILAMENTS EJECTED BY PHAEOCYSTIS (PRYMNESIOPHYCEAE)1

scientific article published on 15 October 2004

Taxonomic reassignment of <i>Pseudohaptolina birgeri comb. nov</i>. (Haptophyta)

scientific article published on 30 October 2020

Telonemia, a new protist phylum with affinity to chromist lineages

scientific article

Temporal and spatial dynamics of Bacteria, Archaea and protists in equatorial coastal waters

scientific article published on 08 November 2019

The MALINA oceanographic expedition: how do changes in ice cover, permafrost and UV radiation impact biodiversity and biogeochemical fluxes in the Arctic Ocean?

scientific article

The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing

scientific article

The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote small sub-unit rRNA sequences with curated taxonomy

scientific article

The Roscoff Culture Collection (RCC): a collection dedicated to marine picoplankton

article

The distribution and diversity of eukaryotic phytoplankton in the Icelandic marine environment

scientific article published in 2023

The diversity of small eukaryotic phytoplankton (< or =3 microm) in marine ecosystems.

scientific article published on 28 June 2008

The importance ofProchlorococcusto community structure in the central North Pacific Ocean

scientific article (publication date: June 1994)

The initiation of Phaeocystis colonies

The life cycle of Phaeocystis (Prymnesiophycaea): evidence and hypotheses

article

The ocean sampling day consortium

scientific article published in 2015

Two-component systems in Prochlorococcus MED4: genomic analysis and differential expression under stress

scientific article published in September 2003

Unicellular cyanobacterium symbiotic with a single-celled eukaryotic alga

scientific article

Use of flow cytometric sorting to better assess the diversity of small photosynthetic eukaryotes in the English Channel

scientific article

Variability in particle attenuation and chlorophyll fluorescence in the tropical Pacific: Scales, patterns, and biogeochemical implications

scientific article published in 1999

Whole-genome amplification (WGA) of marine photosynthetic eukaryote populations.

scientific article

Wide genetic diversity of picoplanktonic green algae (Chloroplastida) in the Mediterranean Sea uncovered by a phylum-biased PCR approach

scientific article

Winter presence of prochlorophytes in surface waters of the northwestern Mediterranean Sea

article

dinoref : A curated dinoflagellate (Dinophyceae) reference database for the 18S rRNA gene

article

pr2‐primers: An 18S rRNA primer database for protists

scientific article published in 2021

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