Search filters

List of works by Garret Suen

A Cohort Study of the Milk Microbiota of Healthy and Inflamed Bovine Mammary Glands From Dryoff Through 150 Days in Milk

scientific article published on 09 October 2018

A Sarcina bacterium linked to lethal disease in sanctuary chimpanzees in Sierra Leone

scientific article published in 2021

A cascade of coregulating enhancer binding proteins initiates and propagates a multicellular developmental program

scientific article

A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity

scientific article published on 15 December 2020

A global analysis of gene expression in S85 grown on cellulose and soluble sugars at different growth rates

article

A phylogenetic analysis of the phylum Fibrobacteres

scientific article published on 05 June 2013

Addressing Global Ruminant Agricultural Challenges Through Understanding the Rumen Microbiome: Past, Present, and Future

scientific article published on 25 September 2018

An analysis of the ruminal bacterial microbiota in West African Dwarf sheep fed grass- and tree-based diets.

scientific article published on 13 February 2014

An insect herbivore microbiome with high plant biomass-degrading capacity

scientific article

Assessing bacterial community dynamics across the gastrointestinal tract of dairy calves during pre-weaning development.

scientific article published on 23 February 2018

Assessing the Beneficial Effects of the Immunomodulatory Glycan LNFPIII on Gut Microbiota and Health in a Mouse Model of Gulf War Illness

scientific article published on 27 September 2020

Assessing the impact of rumen microbial communities on methane emissions and production traits in Holstein cows in a tropical climate.

scientific article

Bacterial Communities in the Alpaca Gastrointestinal Tract Vary With Diet and Body Site

scientific article published on 01 January 2018

Bacterial communities in the rumen of Holstein heifers differ when fed orchardgrass as pasture vs. hay

scientific article

Bacterial postgenomics: the promise and peril of systems biology

scientific article

Bears Arouse Interest in Microbiota's Role in Health

scientific article published on 9 February 2016

Camelina Seed Supplementation at Two Dietary Fat Levels Change Ruminal Bacterial Community Composition in a Dual-Flow Continuous Culture System

scientific article

Cellulose-degrading bacteria associated with the invasive woodwasp Sirex noctilio

scientific article

Characterization of captive and wild 13-lined ground squirrel cecal microbiotas using Illumina-based sequencing

scientific article published on 03 January 2022

Characterizing the microbiota across the gastrointestinal tract of a Brazilian Nelore steer ⬇️

scientific article published on February 24, 2013

Comparison of 26 sphingomonad genomes reveals diverse environmental adaptations and biodegradative capabilities

scientific article (publication date: June 2013)

Complete genome of the cellulolytic ruminal bacterium Ruminococcus albus 7.

scientific article

Complete genome sequence of the cellulose-degrading bacterium Cellulosilyticum lentocellum

scientific article

Complete genome sequence of the myxobacterium Sorangium cellulosum

scientific article

Compositional and structural dynamics of the ruminal microbiota in dairy heifers and its relationship to methane production

article

Convergent bacterial microbiotas in the fungal agricultural systems of insects

scientific article

Diet influences early microbiota development in dairy calves without long-term impacts on milk production

article

Diet specialization selects for an unusual and simplified gut microbiota in two- and three-toed sloths.

scientific article

Dietary Shifts May Trigger Dysbiosis and Mucous Stools in Giant Pandas (Ailuropoda melanoleuca).

scientific article published on 6 May 2016

Dietary changes during weaning shape the gut microbiota of red pandas (Ailurus fulgens).

scientific article published on 6 January 2018

Differences in major bacterial populations in the intestines of mature broilers after feeding virginiamycin or bacitracin methylene disalicylate.

scientific article published on October 2015

Draft genome of the globally widespread and invasive Argentine ant (Linepithema humile) ⬇️

scientific article

Draft genome of the red harvester ant Pogonomyrmex barbatus

scientific article

Effect of Pre-weaning Diet on the Ruminal Archaeal, Bacterial, and Fungal Communities of Dairy Calves

scientific article published on 15 August 2017

Effect of stevia on the gut microbiota and glucose tolerance in a murine model of diet-induced obesity

scientific article published on 01 May 2020

Effects of corn silage inclusion in preweaning calf diets

scientific article published on 14 March 2019

Evaluating Models of Cellulose Degradation by Fibrobacter succinogenes S85.

scientific article published on 2 December 2015

Feeding modes shape the acquisition and structure of the initial gut microbiota in newborn lambs

scientific article published on 11 April 2019

Fibrobacter communities in the gastrointestinal tracts of diverse hindgut-fermenting herbivores are distinct from those of the rumen

scientific article published on 28 July 2017

Functional genome annotation through phylogenomic mapping

scientific article published on June 2005

Genome sequences of three agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria

scientific article

Hibernation alters the diversity and composition of mucosa-associated bacteria while enhancing antimicrobial defence in the gut of 13-lined ground squirrels

scientific article

Influence of sampling technique and bedding type on the milk microbiota: Results of a pilot study

scientific article published on 19 April 2018

Insect symbioses: a case study of past, present, and future fungus-growing ant research

scientific article published on February 2009

Isolation and characterization of Xenorhabdus nematophila transposon insertion mutants defective in lipase activity against Tween

scientific article published on 19 June 2009

Laryngotracheal Microbiota in Adult Laryngotracheal Stenosis

scientific article published on 01 May 2019

Leucoagaricus gongylophorus produces diverse enzymes for the degradation of recalcitrant plant polymers in leaf-cutter ant fungus gardens

scientific article (publication date: June 2013)

Metagenomic and metaproteomic insights into bacterial communities in leaf-cutter ant fungus gardens

scientific article

Microbial community structure of leaf-cutter ant fungus gardens and refuse dumps

scientific article

Microbial succession in the gastrointestinal tract of dairy cows from 2 weeks to first lactation.

scientific article published on 18 January 2017

Mountain pine beetles colonizing historical and naive host trees are associated with a bacterial community highly enriched in genes contributing to terpene metabolism

scientific article

Multiplexed Competition in a Synthetic Squid Light Organ Microbiome Using Barcode-Tagged Gene Deletions

scientific article published on 14 December 2020

Oral probiotic combination of Lactobacillus and Bifidobacterium alters the gastrointestinal microbiota during antibiotic treatment for Clostridium difficile infection

scientific article published in PLoS ONE

Phylogenetic and amino acid conservation analyses of bacterial L-aspartate-α-decarboxylase and of its zymogen-maturation protein reveal a putative interaction domain.

scientific article published on 15 August 2015

Practical applications of bacterial functional genomics.

scientific article published on January 2007

Predicting prokaryotic ecological niches using genome sequence analysis

scientific article

Response of Beef Cattle Fecal Microbiota to Grazing on Toxic Tall Fescue

scientific article published on 18 July 2019

Ruminal Bacterial Community Composition in Dairy Cows Is Dynamic over the Course of Two Lactations and Correlates with Feed Efficiency

scientific article published on May 2015

SREB, a GATA transcription factor that directs disparate fates in Blastomyces dermatitidis including morphogenesis and siderophore biosynthesis

scientific article

Sequence-based analysis of the genus Ruminococcus resolves its phylogeny and reveals strong host association.

scientific article published on 12 December 2016

Small genome of the fungus Escovopsis weberi, a specialized disease agent of ant agriculture

scientific article published on 14 March 2016

Social insect genomes exhibit dramatic evolution in gene composition and regulation while preserving regulatory features linked to sociality

scientific article published on May 2013

Symbiosis research, technology, and education: Proceedings of the 6th International Symbiosis Society Congress held in Madison Wisconsin, USA, August 2009

scientific article published on 30 June 2010

The Evolutionary Innovation of Nutritional Symbioses in Leaf-Cutter Ants

scientific article

The Phylogenomic Diversity of Herbivore-Associated spp. Is Correlated to Lignocellulose-Degrading Potential

scientific article published in 2018

The Ruminococci: key symbionts of the gut ecosystem

scientific article published on 28 February 2018

The bovine epimural microbiota displays compositional and structural heterogeneity across different ruminal locations

scientific article published on 11 February 2020

The complete genome sequence of Fibrobacter succinogenes S85 reveals a cellulolytic and metabolic specialist

scientific article (publication date: 19 April 2011)

The entomopathogenic bacterial endosymbionts Xenorhabdus and Photorhabdus: convergent lifestyles from divergent genomes

scientific article published in 2011

The genome sequence of the leaf-cutter ant Atta cephalotes reveals insights into its obligate symbiotic lifestyle

scientific article

The genome sequences of Cellulomonas fimi and "Cellvibrio gilvus" reveal the cellulolytic strategies of two facultative anaerobes, transfer of "Cellvibrio gilvus" to the genus Cellulomonas, and proposal of Cellulomonas gilvus sp. nov

scientific article

The genomic impact of 100 million years of social evolution in seven ant species

scientific article

The human laryngeal microbiome: effects of cigarette smoke and reflux

scientific article

The ruminal bacterial community in lactating dairy cows has limited variation on a day-to-day basis

scientific article published on 19 August 2019

Transcriptomics analysis of host liver and meta-transcriptome analysis of rumen epimural microbial community in young calves treated with artificial dosing of rumen content from adult donor cow

scientific article published in Scientific Reports

Transient changes in milk production efficiency and bacterial community composition resulting from near-total exchange of ruminal contents between high- and low-efficiency Holstein cows.

scientific article published on 6 July 2017

Understanding the Milk Microbiota

scientific article published on 01 November 2018

Use of a systems engineering framework to assess perceptions and practices about antimicrobial resistance of workers on large dairy farms in Wisconsin

scientific article published on 03 November 2020

Validating the use of bovine buccal sampling as a proxy for the rumen microbiota using a time course and random forest classification approach

scientific article published on 26 June 2020

Wisconsin microbiome study, a cross-sectional investigation of dietary fibre, microbiome composition and antibiotic-resistant organisms: rationale and methods.

scientific article

Paulina is supported by:

About Paulina

Help