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List of works by Daniel S. Himmelstein

A Model Free Method to Generate Human Genetics Datasets with Complex Gene-Disease Relationships

article

An Open-Publishing Response to the COVID-19 Infodemic ⬇️

Association of HLA Genetic Risk Burden With Disease Phenotypes in Multiple Sclerosis

scientific article published on 31 May 2016

Compressing gene expression data using multiple latent space dimensionalities learns complementary biological representations

scientific article published on 11 May 2020

Enabling personal genomics with an explicit test of epistasis

scientific article published on January 2010

Erratum to: Evolving hard problems: generating human genetics datasets with a complex etiology

scientific article published on 3 February 2016

Evolving hard problems: Generating human genetics datasets with a complex etiology ⬇️

scientific article (publication date: 7 July 2011)

Genetic Association-Guided Analysis of Gene Networks for the Study of Complex Traits

scientific article published on April 2016

Heterogeneous Network Edge Prediction: A Data Integration Approach to Prioritize Disease-Associated Genes

scientific article

Is authorship sufficient for today's collaborative research? A call for contributor roles

scientific article published on 30 June 2020

Lung cancer incidence decreases with elevation: evidence for oxygen as an inhaled carcinogen

scientific article (publication date: 2015)

Meta-analysis of genome-wide association studies reveals genetic overlap between Hodgkin lymphoma and multiple sclerosis

scientific article published on 12 March 2016

Mondo: Unifying diseases for the world, by the world

Multifactor dimensionality reduction for graphics processing units enables genome-wide testing of epistasis in sporadic ALS.

scientific article

Open collaborative writing with Manubot

scientific article published in June 2019

Opportunities And Obstacles For Deep Learning In Biology And Medicine

scholarly article published 28 May 2017

Opportunities and obstacles for deep learning in biology and medicine.

scientific article published in April 2018

PMLB v1.0: an open-source dataset collection for benchmarking machine learning methods

scientific article published in 2021

Precision annotation of digital samples in NCBI's gene expression omnibus

scientific article published on 19 September 2017

Rephetio: Repurposing drugs on a hetnet [report]

article published in 2016

Sci-Hub provides access to nearly all scholarly literature

article

Sci-Hub provides access to nearly all scholarly literature

Sci-Hub provides access to nearly all scholarly literature

Sci-Hub provides access to nearly all scholarly literature

Sci-Hub provides access to nearly all scholarly literature.

scientific article published on 9 February 2018

Sequential compression across latent space dimensions enhances gene expression signatures

article

Systematic integration of biomedical knowledge prioritizes drugs for repurposing

scientific article published on 22 September 2017

Systematic integration of biomedical knowledge prioritizes drugs for repurposing

peer reviewed article

The Informative Extremes: Using Both Nearest and Farthest Individuals Can Improve Relief Algorithms in the Domain of Human Genetics

article

Understanding multicellular function and disease with human tissue-specific networks

scientific article published on 27 April 2015

Unifying the Identification of Biomedical Entities with the Bioregistry ⬇️

preprint published on 10 July 2022

Unifying the identification of biomedical entities with the Bioregistry ⬇️

scientific article published on 19 November 2022

iCTNet2: integrating heterogeneous biological interactions to understand complex traits

scientific article

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