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List of works by Stéphane Le Crom

A Network of Paralogous Stress Response Transcription Factors in the Human Pathogen Candida glabrata

scientific article published on 9 May 2016

A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis

scientific article

Acclimation of a low iron adapted Ostreococcus strain to iron limitation through cell biomass lowering.

scientific article

Ammonia pulses and metabolic oscillations guide yeast colony development.

scientific article

An evaluation of custom microarray applications: the oligonucleotide design challenge.

scientific article published on 10 February 2009

Aozan: an automated post-sequencing data-processing pipeline

scientific article

Autocrine activation of adenosine A1 receptors blocks D1A but not D1B dopamine receptor desensitization

scientific article published on September 2002

Comparative genome sequence analysis underscores mycoparasitism as the ancestral life style of Trichoderma

scientific article (publication date: 2011)

Comparative transcriptomics reveals different strategies of Trichoderma mycoparasitism.

scientific article

Connexin 43 Controls the Astrocyte Immunoregulatory Phenotype.

scientific article

Cyclin G and the Polycomb Repressive complexes PRC1 and PR-DUB cooperate for developmental stability

scientific article published on 11 July 2018

Delineation of the conserved functional properties of D1A, D1B and D1C dopamine receptor subtypes in vertebrates

scientific article published on June 2004

Differential regulation of the cellulase transcription factors XYR1, ACE2, and ACE1 in Trichoderma reesei strains producing high and low levels of cellulase

scientific article published on 17 December 2010

Doelan: a solution for quality control monitoring of microarray production

scientific article published on 22 September 2005

Dok4 is involved in Schwann cell myelination and axonal interaction in vitro.

scientific article

Eoulsan: a cloud computing-based framework facilitating high throughput sequencing analyses.

scientific article

Erratum to: Genome sequencing of the Trichoderma reesei QM9136 mutant identifies a truncation of the transcriptional regulator XYR1 as the cause for its cellulase-negative phenotype.

scientific article published on 22 September 2015

Evolution and cell biology of dopamine receptors in vertebrates

scientific article published on October 1, 2003

Genome sequencing of the Trichoderma reesei QM9136 mutant identifies a truncation of the transcriptional regulator XYR1 as the cause for its cellulase-negative phenotype

scientific article

Genome-wide transcriptome analyses of silicon metabolism in Phaeodactylum tricornutum reveal the multilevel regulation of silicic acid transporters

scientific article

Goulphar: rapid access and expertise for standard two-color microarray normalization methods

scientific article

Identification of Phox2b-regulated genes by expression profiling of cranial motoneuron precursors.

scientific article published on 19 June 2008

Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum

scientific article published in January 2013

Kinetic transcriptome analysis reveals an essentially intact induction system in a cellulase hyper-producer Trichoderma reesei strain

scientific article published on 12 December 2014

Meet-U: Educating through research immersion.

scientific article published on 15 March 2018

New insights into the pleiotropic drug resistance network from genome-wide characterization of the YRR1 transcription factor regulation system.

scientific article

New partners in regulation of gene expression: the enhancer of Trithorax and Polycomb Corto interacts with methylated ribosomal protein l12 via its chromodomain

scientific article

Novel features of boundary cap cells revealed by the analysis of newly identified molecular markers

scientific article published in October 2009

RNA sequencing revealed novel actors of the acquisition of drug resistance in Candida albicans

scientific article published on August 16, 2012

Role of heat-shock factor 2 in cerebral cortex formation and as a regulator of p35 expression

scientific article

Selection of oligonucleotides for whole-genome microarrays with semi-automatic update.

scientific article

Teolenn: an efficient and customizable workflow to design high-quality probes for microarray experiments.

scientific article

The CRE1 carbon catabolite repressor of the fungus Trichoderma reesei: a master regulator of carbon assimilation

scientific article published on May 27, 2011

The central role of PDR1 in the foundation of yeast drug resistance

scientific article

Tracking the roots of cellulase hyperproduction by the fungus Trichoderma reesei using massively parallel DNA sequencing

scientific article published on 02 September 2009

Translation in astrocyte distal processes sets molecular heterogeneity at the gliovascular interface.

scientific article published on 28 March 2017

bPeaks: a bioinformatics tool to detect transcription factor binding sites from ChIPseq data in yeasts and other organisms with small genomes.

scientific article

yMGV: a cross-species expression data mining tool.

scientific article

yMGV: helping biologists with yeast microarray data mining.

scientific article