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List of works by José Lourenço

A multi-country study of dengue vaccination strategies with Dengvaxia and a future vaccine candidate in three dengue-endemic countries: Vietnam, Thailand, and Colombia

scientific article published on 21 March 2018

A naturally protective epitope of limited variability as an influenza vaccine target

scientific article published in Nature Communications

Author Correction: Malaria elimination on Hainan Island despite climate change

correction of a scholarly article

Challenges in dengue research: A computational perspective.

scientific article

Chikungunya virus outbreak in the Amazon region: replacement of the Asian genotype by an ECSA lineage

article

Competing species leave many potential niches unfilled.

scientific article

Dengue serotype immune-interactions and their consequences for vaccine impact predictions

scientific article published on 02 June 2016

Distinct rates and patterns of spread of the major HIV-1 subtypes in Central and East Africa

scientific article published on 06 December 2019

Effects of neutralizing antibodies on escape from CD8+ T-cell responses in HIV-1 infection

scientific article published on August 2015

Epidemiological and ecological determinants of Zika virus transmission in an urban setting.

scientific article published on 9 September 2017

Epidemiology of Chikungunya Virus in Bahia, Brazil, 2014-2015

scientific article

Epidemiology of the Zika Virus Outbreak in the Cabo Verde Islands, West Africa.

scientific article published on 15 March 2018

Estimating the false-negative test probability of SARS-CoV-2 by RT-PCR

scientific article published on 01 December 2020

Field and classroom initiatives for portable sequence-based monitoring of dengue virus in Brazil

scientific article published on 16 April 2021

Genomic and epidemiological characterisation of a dengue virus outbreak among blood donors in Brazil

scientific article published on 9 November 2017

Genomic and epidemiological monitoring of yellow fever virus transmission potential

scientific article published in Science

Genomic, epidemiological and digital surveillance of Chikungunya virus in the Brazilian Amazon

article

High residual carriage of vaccine-serotype Streptococcus pneumoniae after introduction of pneumococcal conjugate vaccine in Malawi

scientific article published on 06 May 2020

Identifying genes associated with invasive disease in S. pneumoniae by applying a machine learning approach to whole genome sequence typing data

article

Indian Ocean temperature anomalies predict long-term global dengue trends

scientific article published on 09 May 2024

Letter to the editor: Atypical weather is associated with the 2022 early start of West Nile virus transmission in Italy

scientific article published in 2022

Lineage structure of Streptococcus pneumoniae is driven by immune selection on the groEL heat-shock protein

article published in 2016

Lineage structure of Streptococcus pneumoniae may be driven by immune selection on the groEL heat-shock protein

scientific article published on 22 August 2017

MANTIS: an R package that simulates multilocus models of pathogen evolution

scientific article published on 28 May 2015

MVSE: An R-package that estimates a climate-driven mosquito-borne viral suitability index

scientific article published on 19 June 2019

Malaria elimination on Hainan Island despite climate change

scientific article published in 2022

Modeling Combinations of Pre-erythrocytic Plasmodium falciparum Malaria Vaccines

scientific article

Natural, persistent oscillations in a spatial multi-strain disease system with application to dengue

scientific article

Reducing HIV infection in people who inject drugs is impossible without targeting recently-infected subjects.

scientific article

Reverse immunodynamics: a new method for identifying targets of protective immunity

scientific article published in Scientific Reports

SARS-CoV-2 shifting transmission dynamics and hidden reservoirs potentially limit efficacy of public health interventions in Italy

scientific article published on 21 April 2021

Spread of Chikungunya Virus East/Central/South African Genotype in Northeast Brazil

scientific article published on October 2017

The 2012 Madeira dengue outbreak: epidemiological determinants and future epidemic potential

scientific article

The Long-Term Safety, Public Health Impact, and Cost-Effectiveness of Routine Vaccination with a Recombinant, Live-Attenuated Dengue Vaccine (Dengvaxia): A Model Comparison Study

scientific article

The generation of a simian adenoviral vectored HCV vaccine encoding genetically conserved gene segments to target multiple HCV genotypes

scientific article

The global impact of the COVID-19 pandemic on the prevention, diagnosis and treatment of hepatitis B virus (HBV) infection

scientific article published on 01 January 2021

The impact of IPTi and IPTc interventions on malaria clinical burden - in silico perspectives

scientific article

The ongoing COVID-19 epidemic in Minas Gerais, Brazil: insights from epidemiological data and SARS-CoV-2 whole genome sequencing.

scientific article published on 11 May 2020

Vaccination Drives Changes in Metabolic and Virulence Profiles of Streptococcus pneumoniae

scientific article published on 16 July 2015

Vaccination can drive an increase in frequencies of antibiotic resistance among nonvaccine serotypes of Streptococcus pneumoniae

scientific article published on 6 March 2018

Viral and Epidemiological Determinants of the Invasion Dynamics of Novel Dengue Genotypes ⬇️

scientific article published on November 23, 2010

Zika virus complete genome from Salvador, Bahia, Brazil

scientific article (publication date: July 2016)

Zika virus in the Americas: Early epidemiological and genetic findings

scientific article

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