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List of works by Jay C. D. Hinton

A BTP1 prophage gene present in invasive non-typhoidal Salmonella determines composition and length of the O-antigen of the lipopolysaccharide

scientific article published on 11 February 2015

A combination of cytochrome c nitrite reductase (NrfA) and flavorubredoxin (NorV) protects Salmonella enterica serovar Typhimurium against killing by NO in anoxic environments.

scientific article published in April 2008

A global role for Fis in the transcriptional control of metabolism and type III secretion in Salmonella enterica serovar Typhimurium.

scientific article

A model system for studying the transcriptomic and physiological changes associated with mammalian host-adaptation by Leptospira interrogans serovar Copenhageni

scientific article

A novel strategy for the identification of genomic islands by comparative analysis of the contents and contexts of tRNA sites in closely related bacteria

scientific article

A pleiotropic reduced virulence (Rvi-) mutant of Erwinia carotovora subspecies atroseptica is defective in flagella assembly proteins that are conserved in plant and animal bacterial pathogens

article

A pleiotropic reduced virulence (Rvi-) mutant of Erwinia carotovora subspecies atroseptica is defective in flagella assembly proteins that are conserved in plant and animal bacterial pathogens.

scientific article published on July 1993

A short-oligonucleotide microarray that allows improved detection of gastrointestinal tract microbial communities.

scientific article

A simple and rapid method of direct sequencing using Dynabeads

scientific article published on 01 September 1991

A third mode of surface-associated growth: immobilization of Salmonella enterica serovar Typhimurium modulates the RpoS-directed transcriptional programme.

scientific article published on 22 February 2012

A widespread family of WYL-domain transcriptional regulators co-localizes with diverse phage defence systems and islands

scientific article published on 01 May 2022

A window into lysogeny: revealing temperate phage biology with transcriptomics

scientific article published on 05 February 2020

Adding function to the genome of African Salmonella Typhimurium ST313 strain D23580

scientific article published on 15 January 2019

All stressed out. Salmonella pathogenesis and reactive nitrogen species.

scientific article

An accessible, efficient and global approach for the large-scale sequencing of bacterial genomes

scientific article published on 21 December 2021

An incomplete TCA cycle increases survival of Salmonella Typhimurium during infection of resting and activated murine macrophages

scientific article

An infection-relevant transcriptomic compendium for Salmonella enterica Serovar Typhimurium

scientific article published on December 2013

ArrayOme: a program for estimating the sizes of microarray-visualized bacterial genomes

scientific article

BABAR: an R package to simplify the normalisation of common reference design microarray-based transcriptomic datasets.

scientific article

Benefits and pitfalls of using microarrays to monitor bacterial gene expression during infection

scientific article published on June 2004

Butyrate specifically down-regulates salmonella pathogenicity island 1 gene expression.

scientific article

Case-control investigation of invasive Salmonella disease in Malawi reveals no evidence of environmental or animal transmission of invasive strains, and supports human to human transmission

scientific article published in 2022

Cellulose mediates attachment of Salmonella enterica Serovar Typhimurium to tomatoes

scientific article published on 30 May 2011

ChIP-seq and transcriptome analysis of the OmpR regulon of Salmonella enterica serovars Typhi and Typhimurium reveals accessory genes implicated in host colonization.

scientific article published on 19 December 2012

Characterization of the Prophage Repertoire of African Salmonella Typhimurium ST313 Reveals High Levels of Spontaneous Induction of Novel Phage BTP1.

scientific article

Coding sequence targeting by MicC RNA reveals bacterial mRNA silencing downstream of translational initiation

scientific article

Comparative analysis of Salmonella susceptibility and tolerance to the biocide chlorhexidine identifies a complex cellular defense network.

scientific article

Comparative genomic indexing reveals the phylogenomics of Escherichia coli pathogens.

scientific article published on August 2003

DNA adenine methylation regulates virulence gene expression in Salmonella enterica serovar Typhimurium.

scientific article

DNA binding is not sufficient for H-NS-mediated repression of proU expression

scientific article published in May 1997

Decoding the stoichiometric composition and organisation of bacterial metabolosomes

scientific article published on 24 April 2020

Deep sequencing analysis of small noncoding RNA and mRNA targets of the global post-transcriptional regulator, Hfq

scientific article

Detoxification of nitric oxide by the flavorubredoxin of Salmonella enterica serovar Typhimurium.

scientific article published in February 2005

Domain organization and oligomerization among H-NS-like nucleoid-associated proteins in bacteria.

scientific article

Down-regulation of key virulence factors makes the Salmonella enterica serovar Typhimurium rfaH mutant a promising live-attenuated vaccine candidate

scientific article

Editorial overview: Genomics: The era of genomically-enabled microbiology

scholarly article by Neil Hall & Jay C. D. Hinton published February 2015 in Current Opinion in Microbiology

Escherichia coli cytochrome c nitrite reductase NrfA.

scientific article

Evasion of MAIT cell recognition by the African Salmonella Typhimurium ST313 pathovar that causes invasive disease

scientific article published on 11 August 2020

Exposure of Salmonella enterica Serovar Typhimurium to Three Humectants Used in the Food Industry Induces Different Osmoadaptation Systems.

scientific article published on 24 July 2015

Expression and mutational analysis of the nucleoid-associated protein H-NS of Salmonella typhimurium

scientific article

Functional Transcriptomics for Bacterial Gene Detectives

scientific article published on 01 September 2018

Genetic variation in the MacAB-TolC efflux pump influences pathogenesis of invasive Salmonella isolates from Africa

scientific article published on 24 August 2020

Genome-wide analysis of the H-NS and Sfh regulatory networks in Salmonella Typhimurium identifies a plasmid-encoded transcription silencing mechanism

scientific article

Glucose and glycolysis are required for the successful infection of macrophages and mice by Salmonella enterica serovar typhimurium.

scientific article published on 20 April 2009

Green fluorescent protein as a marker for conditional gene expression in bacterial cells

scientific article published in January 2002

H-NS is a part of a thermally controlled mechanism for bacterial gene regulation.

scientific article

H-NS mediates the silencing of laterally acquired genes in bacteria

scientific journal article

H-NS oligomerization domain structure reveals the mechanism for high order self-association of the intact protein

scientific article

Histone-like protein H1 (H-NS), DNA supercoiling, and gene expression in bacteria

scientific article (publication date: 2 November 1990)

Identification of a new member of the phage shock protein response in Escherichia coli, the phage shock protein G (PspG).

scientific article published on 13 October 2004

Intracellular niche-specific profiling reveals transcriptional adaptations required for the cytosolic lifestyle of Salmonella enterica

scientific article published on 30 August 2021

InvS Coordinates Expression of PrgH and FimZ and Is Required for Invasion of Epithelial Cells by Salmonella enterica serovar Typhimurium. ⬇️

scientific article published on 24 April 2017

Invasive non-typhoidal Salmonella typhimurium ST313 are not host-restricted and have an invasive phenotype in experimentally infected chickens

scientific article

It's easy to build your own microarrayer!

scientific article published in April 2001

Lag phase is a distinct growth phase that prepares bacteria for exponential growth and involves transient metal accumulation.

scientific article

Lower Density and Shorter Duration of Nasopharyngeal Carriage by Pneumococcal Serotype 1 (ST217) May Explain Its Increased Invasiveness over Other Serotypes

scientific article published on 08 December 2020

Methionine biosynthesis and transport are functionally redundant for the growth and virulence of Salmonella Typhimurium.

scientific article

Microarray Analysis of Response of Salmonella during Infection of HLA-B27- Transfected Human Macrophage-Like U937 Cells ⬇️

scientific article published on July 30, 2010

MobilomeFINDER: web-based tools for in silico and experimental discovery of bacterial genomic islands

scientific article published on 30 May 2007

Multiple redundant stress resistance mechanisms are induced in Salmonella enterica serovar Typhimurium in response to alteration of the intracellular environment via TLR4 signalling.

scientific article published on 18 June 2009

Network analysis of the transcriptional pattern of young and old cells of Escherichia coli during lag phase

scientific article

Novel phenotypes of Escherichia coli tat mutants revealed by global gene expression and phenotypic analysis

scientific article

Nucleoid-associated protein HU controls three regulons that coordinate virulence, response to stress and general physiology in Salmonella enterica serovar Typhimurium

scientific article published on 6 January 2011

Oligomerization of the chromatin-structuring protein H-NS.

scientific article

Pervasive post-transcriptional control of genes involved in amino acid metabolism by the Hfq-dependent GcvB small RNA.

scientific article published on 27 July 2011

Phenotypic characterization of Salmonella isolated from food production environments associated with low-water activity foods

scientific article published in September 2013

Pneumococcal Colonization and Virulence Factors Identified Via Experimental Evolution in Infection Models

scientific article published on 01 May 2021

Polynucleotide phosphorylase is a global regulator of virulence and persistency in Salmonella enterica.

scientific article

Polynucleotide phosphorylase negatively controls spv virulence gene expression in Salmonella enterica.

scientific article

ProP is required for the survival of desiccated Salmonella enterica serovar typhimurium cells on a stainless steel surface

scientific article published on 10 May 2013

Prophage-encoded phage defense proteins with cognate self-immunity

scientific article published on 13 July 2020

Public health surveillance in the UK revolutionises our understanding of the invasive Salmonella Typhimurium epidemic in Africa

scientific article published on 31 October 2017

RNA-seq Brings New Insights to the Intra-Macrophage Transcriptome of Salmonella Typhimurium

scientific article published on 12 November 2015

Role of a single noncoding nucleotide in the evolution of an epidemic African clade of Salmonella.

scientific article

Salicylidene acylhydrazide-mediated inhibition of type III secretion system-1 in Salmonella enterica serovar Typhimurium is associated with iron restriction and can be reversed by free iron

scientific article published on 6 November 2009

Salmonella enterica Serovar Panama, an Understudied Serovar Responsible for Extraintestinal Salmonellosis Worldwide

scientific article published on 21 August 2019

Salmonella identified in pigs in Kenya and Malawi reveals the potential for zoonotic transmission in emerging pork markets

scientific article published on 24 November 2020

Salmonella induces flagellin- and MyD88-dependent migration of bacteria-capturing dendritic cells into the gut lumen

scientific article published on 16 April 2009

Salmonella transcriptomics: relating regulons, stimulons and regulatory networks to the process of infection.

scientific article

SigmaE-dependent small RNAs of Salmonella respond to membrane stress by accelerating global omp mRNA decay

scientific article

Single-copy green fluorescent protein gene fusions allow accurate measurement of Salmonella gene expression in vitro and during infection of mammalian cells

scientific article published on December 2003

Specific and pleiotropic patterns of mRNA regulation by ArcZ, a conserved, Hfq-dependent small RNA

scientific article

SseL, a Salmonella deubiquitinase required for macrophage killing and virulence.

scholarly article

Stepwise evolution of Salmonella Typhimurium ST313 causing bloodstream infection in Africa

scientific article published on 21 December 2020

Structural characterization of the N-terminal oligomerization domain of the bacterial chromatin-structuring protein, H-NS.

scientific article

Superfolder GFP reporters validate diverse new mRNA targets of the classic porin regulator, MicF RNA.

scientific article published on 28 March 2012

Systematic deletion of Salmonella small RNA genes identifies CyaR, a conserved CRP-dependent riboregulator of OmpX synthesis

scientific article

The Escherichia coli genome sequence: the end of an era or the start of the FUN? ⬇️

scientific article published on November 1, 1997

The FUN of identifying gene function in bacterial pathogens; insights from Salmonella functional genomics.

scientific article published on 07 September 2013

The H-NS-like protein StpA represses the RpoS (sigma 38) regulon during exponential growth of Salmonella Typhimurium.

scientific article published on 19 October 2009

The Impact of 18 Ancestral and Horizontally-Acquired Regulatory Proteins upon the Transcriptome and sRNA Landscape of Salmonella enterica serovar Typhimurium.

scientific article

The ancestral SgrS RNA discriminates horizontally acquired Salmonella mRNAs through a single G-U wobble pair

scientific article published in March 2012

The bacterial signal molecule, ppGpp, mediates the environmental regulation of both the invasion and intracellular virulence gene programs of Salmonella

scientific article published on 11 August 2006

The challenge of relating gene expression to the virulence of Salmonella enterica serovar Typhimurium.

scientific article published on 22 March 2011

The chromatin-associated protein H-NS interacts with curved DNA to influence DNA topology and gene expression

scientific article (publication date: 16 October 1992)

The diversity, evolution and ecology of Salmonella in venomous snakes

scientific article published on 04 June 2019

The fitness landscape of the African Salmonella Typhimurium ST313 strain D23580 reveals unique properties of the pBT1 plasmid

scientific article published on 27 September 2019

The global consequence of disruption of the AcrAB-TolC efflux pump in Salmonella enterica includes reduced expression of SPI-1 and other attributes required to infect the host.

scientific article published on May 2009

The integration host factor (IHF) integrates stationary-phase and virulence gene expression in Salmonella enterica serovar Typhimurium.

scientific article published on March 2006

The leucine-responsive regulatory protein, Lrp, activates transcription of the fim operon in Salmonella enterica serovar typhimurium via the fimZ regulatory gene.

scientific article

The phage defence island of a multidrug resistant plasmid uses both BREX and type IV restriction for complementary protection from viruses

scientific article published on 01 November 2021

The primary transcriptome, small RNAs and regulation of antimicrobial resistance in Acinetobacter baumannii ATCC 17978

The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium.

scientific article

The transcriptional programme of Salmonella enterica serovar Typhimurium reveals a key role for tryptophan metabolism in biofilms.

scientific article

The use of chicken and insect infection models to assess the virulence of African Salmonella Typhimurium ST313

scientific article published on 26 July 2019

Transcriptional adaptation of Shigella flexneri during infection of macrophages and epithelial cells: insights into the strategies of a cytosolic bacterial pathogen

scientific article

Transcriptional profiling of colicin-induced cell death of Escherichia coli MG1655 identifies potential mechanisms by which bacteriocins promote bacterial diversity

scientific article published on February 2004

Transcriptomic analysis of Escherichia coli O157:H7 and K-12 cultures exposed to inorganic and organic acids in stationary phase reveals acidulant- and strain-specific acid tolerance responses

scientific article

Unphosphorylated CsgD controls biofilm formation in Salmonella enterica serovar Typhimurium.

scientific article published on 9 June 2010

Unravelling the biology of macrophage infection by gene expression profiling of intracellular Salmonella enterica

scientific article published in January 2003

Use of TnphoA to enrich for extracellular enzyme mutants of Erwinia carotovora subspecies carotovora

scientific article

sRNAs and the virulence of Salmonella enterica serovar Typhimurium

scientific article

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