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List of works by Yuji Isagi

A Markov approach for describing post-fire succession of vegetation

article by Yuji Isagi & Nobukazu Nakagoshi published August 1990 in Ecological Research

A Narrow Endemic or a Species Showing Disjunct Distribution? Studies on Meehania montis-koyae Ohwi (Lamiaceae)

scientific article published on 08 September 2020

A quantitative analysis of phenotypic variations of Metrosideros polymorpha within and across populations along environmental gradients on Mauna Loa, Hawaii

scientific article published on 11 August 2015

An exotic herbivorous insect drives the evolution of resistance in the exotic perennial herb<i>Solidago altissima</i>

scientific article published in 2014

Application of a simplified method of chloroplast enrichment to small amounts of tissue for chloroplast genome sequencing

scientific article published on 8 May 2017

Asymmetric gene flow and the distribution of genetic diversity in morphologically distinct Abies mariesii populations in contrasting eco-habitats

article

Availability of short microsatellite markers from butterfly museums and private specimens

article by Naoyuki Nakahama & Yuji Isagi published January 2017 in Entomological Science

Biogeography of the Australian monsoon tropics

article

Chloroplast DNA sequencing and detailed microsatellite genotyping of all remnant populations suggests that only a single genet survives of the critically endangered plant Rehmannia japonica.

scientific article

Climate oscillation during the Quaternary associated with landscape heterogeneity promoted allopatric lineage divergence of a temperate tree Kalopanax septemlobus (Araliaceae) in East Asia.

scientific article published on 31 May 2012

Climate, not Aboriginal landscape burning, controlled the historical demography and distribution of fire-sensitive conifer populations across Australia

scientific article (publication date: 22 December 2013)

Clonal structure and flowering traits of a bamboo [Phyllostachys pubescens (Mazel) Ohwi] stand grown from a simultaneous flowering as revealed by AFLP analysis

scientific article published on 01 July 2004

Comparison of pollination characteristics between the insular shrubClerodendrum izuinsulareand its widespread congenerC. trichotomum

Complete genotyping in conservation genetics, a case study of a critically endangered shrub, Stachyurus macrocarpus var. prunifolius (Stachyuraceae) in the Ogasawara Islands, Japan.

scientific article

Complex pollination of a tropical Asian rainforest canopy tree by flower-feeding thrips and thrips-feeding predators.

scientific article published on 20 October 2016

Conflict in outcomes for conservation based on population genetic diversity and genetic divergence approaches: a case study in the Japanese relictual conifer Sciadopitys verticillata (Sciadopityaceae)

Conservation value of non-native banteng in northern Australia

scientific article published in August 2006

Corrigendum: Development of microsatellite markers for the annual andromonoecious herb Commelina communis f. ciliata (Commelinaceae) [Genes Genet. Syst. (2019) 94, p. 133-138]

scientific article published on 01 January 2020

Corrigendum: New microsatellite markers recognize differences in tandem repeats among four related Gastrodia species (Orchidaceae) [Genes Genet. Syst. (2019) 94, p. 225-229]

scientific article published on 01 January 2020

DNA barcoding reveals seasonal shifts in diet and consumption of deep-sea fishes in wedge-tailed shearwaters

scientific article

Demography and selection analysis of the incipient adaptive radiation of a Hawaiian woody species

scientific article published on 21 January 2022

Determination of temperate bird-flower interactions as entangled mutualistic and antagonistic sub-networks: characterization at the network and species levels

scientific article published on 23 December 2013

Determining the location of a deceased mother tree and estimating forest regeneration variables by use of microsatellites and spatial genetic models

article

Development and characterization of EST-SSR markers for (Cyperaceae), an extremophyte in solfatara fields

scientific article published on 19 October 2018

Development and characterization of EST-SSR markers in an East Asian temperate plant genus Diabelia (Caprifoliaceae)

Development and characterization of microsatellite markers for Prunus verecunda and Prunus grayana (Rosaceae)

article

Development of 17 microsatellite markers forCeratosolen constrictus,the pollinating fig wasp ofFicus fistulosa

article

Development of SSR markers for the tropical alpine tree species Leptospermum recurvum (Myrtaceae) on Mount Kinabalu in Borneo

scientific article published on 2 September 2013

Development of eight microsatellite markers for Corydalis hirtipes (Fumariaceae), a narrow endemic species of Korea

article

Development of microsatellite markers for Adenophora palustris (Campanulaceae), a critically endangered wetland plant species in Japan

Development of microsatellite markers for Bambusa arnhemica (Poaceae: Bambuseae), a bamboo endemic to northern Australia

article

Development of microsatellite markers for Echinops setifer (Asteraceae), an endangered grassland plant species in Japan

Development of microsatellite markers for Euryale ferox (Nymphaeaceae), an endangered aquatic plant species in Japan.

scientific article

Development of microsatellite markers for Metrosideros boninensis (Myrtaceae), an endangered endemic plant species from the Bonin Islands, Japan

Development of microsatellite markers for Pasania edulis (Makino) Makino, one of the dominant species of lucidphyllous forests in southern Kyushu, Japan

article

Development of microsatellite markers for Polemonium kiushianum (Polemoniaceae), a critically endangered grassland plant species in Japan

Development of microsatellite markers for Quercus miyagii Koidz. (Fagaceae), an endemic species in the Ryukyu Islands, Japan

article

Development of microsatellite markers for Stachyurus macrocarpus and Stachyurus macrocarpus var. prunifolius (Stachyuraceae), critically endangered shrub species endemic to the Bonin Islands

scientific article published on 30 January 2009

Development of microsatellite markers for an endangered fern in the Ryukyus, Plagiogyria koidzumii (Plagiogyriaceae)

scientific article published on 10 April 2019

Development of microsatellite markers for partially and putative fully mycoheterotrophic varieties of Pyrola japonica sensu lato (Ericaceae)

scientific article published on 20 February 2017

Development of microsatellite markers for the Asian Stubtail Urosphena squameiceps by using next-generation sequencing technology

article

Development of microsatellite markers for the annual andromonoecious herb Commelina communis f. ciliata (Commelinaceae)

scientific article published on 29 June 2019

Development of microsatellite markers for the coastal shrub Scaevola taccada (Goodeniaceae).

scientific article published on 18 April 2014

Development of microsatellite markers for the completely cleistogamous species Gastrodia takeshimensis (Orchidaceae) that are transferable to its chasmogamous sister G. nipponica

scientific article published on 05 April 2019

Development of microsatellite markers for the endangered grassland species Vincetoxicum pycnostelma (Apocynaceae) by using next-generation sequencing technology

Development of microsatellite markers for the endangered orchid Calanthe izu-insularis (Orchidaceae).

scientific article published on 17 January 2018

Development of microsatellite markers for the endangered sleeper Eleotris oxycephala (Perciformes: Eleotridae)

scientific article published on 16 November 2019

Development of microsatellite markers for the northern Australian endemic fan palm Livistona rigida (Arecaceae), with cross-amplification in the five related species

article

Development of microsatellite markers for the semi-natural grassland herb Veronicastrum japonicum (Plantaginaceae)

scientific article published on 11 February 2016

Development of microsatellite markers for two endangered grassland butterflies, Melitaea ambigua and M. protomedia (Nymphalidae), using Ion Torrent next-generation sequencing

article

Development of nuclear SSRs for the insular shrub Clerodendrum izuinsulare (Verbenaceae) and the widespread C. trichotomum

article

Development of nuclear and chloroplast microsatellite markers for the endangered conifer Callitris sulcata (Cupressaceae).

scientific article published on 10 August 2015

Development of nuclear microsatellite markers for the critically endangered freshwater macrophyte, Nuphar submersa (Nymphaeaceae), and cross-species amplification in six additional Nuphar taxa

Diet analysis by next-generation sequencing indicates the frequent consumption of introduced plants by the critically endangered red-headed wood pigeon (Columba janthina nitens) in oceanic island habitats ⬇️

scientific article published on 19 September 2013

Dietary niche partitioning between sympatric wood mouse species (Muridae: Apodemus) revealed by DNA meta-barcoding analysis

scholarly article published on 14 June 2018

Directional seed and pollen dispersal and their separate effects on anisotropy of fine‐scale spatial genetic structure among seedlings in a dioecious, wind‐pollinated, and wind‐dispersed tree species, <i>Cercidiphyllum japonicum</i>

scientific article published in 2021

Distribution and conservation status of the Critically Endangered Scrophularia takesimensis, a plant endemic to Ulleung Island, Republic of Korea

article

Ecological barriers to gene flow between riparian and forest species of Ainsliaea (Asteraceae).

scientific article published on 7 October 2010

Effect of gene flow on spatial genetic structure in the riparian canopy tree Cercidiphyllum japonicum revealed by microsatellite analysis

scientific article published in January 2006

Environmental DNA reveals cryptic diversity within the subterranean amphipod genus Pseudocrangonyx Akatsuka & Komai, 1922 (Amphipoda: Crangonyctoidea: Pseudocrangonyctidae) from central Japan

scientific article published in 2020

Factors affecting the genetic diversity of a perennial herb Viola grypoceras A. Gray var. grypoceras in urban fragmented forests

article by Yuichi Toma et al published 21 April 2015 in Landscape Ecology

Genecology and ecophysiology of the maintenance of foliar phenotypic polymorphisms of <i>Leptospermum recurvum</i> (Myrtaceae) under oscillating atmospheric desiccation in the tropical‐subalpine zone of Mount Kinabalu, Borneo

scientific article published in 2020

Genetic and Morphological Differences among Populations of the Japanese Bush-Warbler (Aves: Sylviidae) on the Ogasawara Islands, Northern Pacific

Genetic and reproductive consequences of forest fragmentation for populations of Magnolia obovata

Genetic and reproductive consequences of forest fragmentation for populations of Magnolia obovata

scientific article published in 2007

Genetic consequences of plant edaphic specialization to solfatara fields: Phylogenetic and population genetic analysis of Carex angustisquama (Cyperaceae)

scientific article published on 04 December 2019

Genetic consequences of rapid population decline and restoration of the critically endangered herb Polemonium kiushianum

Genetic differentiation among populations of an oceanic island: The case ofMetrosideros boninensis, an endangered endemic tree species in the Bonin Islands

article

Genetic diversity and population structure of Nuphar submersa (Nymphaeaceae), a critically endangered aquatic plant endemic to Japan, and implications for its conservation

scientific article

Genetic diversity of the Japanese wood pigeon, Columba janthina, endemic to islands of East Asia, estimated by newly developed microsatellite markers

scientific article published in December 2011

Genetic evidence for paternal inheritance of the chloroplast in four Australian Callitris species (Cupressaceae)

article

Genetic structure of introduced swamp buffalo subpopulations in tropical Australia

article

Genetic structure of the critically endangered Red-headed Wood PigeonColumba janthina nitensand its implications for the management of threatened island populations

scientific article published in 2013

Genetic variation and structure of the endangered Lady Fern Athyrium viridescentipes based on ubiquitous genotyping.

scientific article

Genome sequencing of Metrosideros polymorpha (Myrtaceae), a dominant species in various habitats in the Hawaiian Islands with remarkable phenotypic variations.

scientific article

Genomic insights on the contribution of balancing selection and local adaptation to the long-term survival of a widespread living fossil tree, Cercidiphyllum japonicum

scientific article published on 09 July 2020

Geographic variations in phenotypic traits of the exotic herbSolidago altissimaand abundance of recent established exotic herbivorous insects

Has long‐distance flight ability been maintained by pigeons in highly insular habitats?

scientific article published in 2022

High-throughput linkage mapping of Australian white cypress pine (Callitris glaucophylla) and map transferability to related species

article

Historical changes in grassland area determined the demography of semi-natural grassland butterflies in Japan

scientific article published on 26 February 2018

How did the exposed seafloor function in postglacial northward range expansion of Kalopanax septemlobus? Evidence from ecological niche modelling

article

Identification of two mutations that cause defects in the ligninolytic system through an efficient forward genetics in the white-rot agaricomycete Pleurotus ostreatus

scientific article published on 21 November 2016

Inferring historical survivals of climate relicts: the effects of climate changes, geography, and population-specific factors on herbaceous hydrangeas

scientific article published on 28 January 2021

Interspecific and annual variation in pre-dispersal seed predation by a granivorous bird in two East Asian hackberries, Celtis biondii and Celtis sinensis

scientific article published on 2 December 2011

Isolation and characterization of 10 microsatellite loci in Callicarpa subpubescens (Verbenaceae), an endemic species of the Bonin Islands

scientific article published on 20 August 2008

Isolation and characterization of 11 microsatellite loci in Swida controversa (Cornaceae)

Isolation and characterization of 52 polymorphic EST-SSR markers for Callitris columellaris (Cupressaceae).

scientific article

Isolation and characterization of microsatellite loci for the endangered wetland plant Adenophora palustris (Campanulaceae).

scientific article published on 19 September 2016

Isolation and characterization of microsatellite loci fromCorydalis ambigua(Papaveraceae)

Isolation and characterization of microsatellite loci in Melicope quadrilocularis (Rutaceae), an endemic plant species of the Bonin Islands, Japan, and cross-species amplification in closely related taxa

article

Isolation and characterization of microsatellite loci in a clonal herb, Cardamine leucantha (Brassicaceae).

scientific article published on 23 November 2011

Isolation and characterization of microsatellite loci in the invasive herb Solidago altissima (Asteraceae). ⬇️

scientific article

Isolation and characterization of microsatellite loci inAinsliaea faurieana(Asteraceae), an endemic plant species on Yakushima Island, Japan, and cross-species amplification in closely related taxa

article

Isolation and characterization of novel microsatellite loci for the endangered orchid Cypripedium japonicum (Orchidaceae).

scientific article published on 11 February 2016

Isolation and characterization of polymorphic microsatellite loci for Imperata cylindrica, an invasive perennial grass

Isolation and characterization of ten microsatellite loci of endangered Anderson’s crocodile newt, Echinotriton andersoni

Lineage admixture during postglacial range expansion is responsible for the increased gene diversity of Kalopanax septemlobus in a recently colonised territory ⬇️

scientific article (publication date: October 2011)

Livistona palms in Australia: ancient relics or opportunistic immigrants?

scientific article published on 17 September 2009

Low genetic diversity in the bottlenecked population of endangered non-native banteng in northern Australia

scientific article

Mating pattern of a distylous primrose in a natural population: unilateral outcrossing and asymmetric selfing between sexual morphs

Microsatellite analysis of pollen flow in Rhododendron metternichii var. hondoense

scientific article published in 2000

Microsatellite analysis of the regeneration process of Magnolia obovata Thunb

scientific article published on 01 February 2000

Microsatellite loci in an endangered fern species, Athyrium viridescentipes (Woodsiaceae), and cross-species amplification.

scientific article

Microsatellite markers for Nuphar japonica (Nymphaeaceae), an aquatic plant in the agricultural ecosystem of Japan

scientific article (publication date: December 2016)

Multiple and mass introductions from limited origins: genetic diversity and structure of Solidago altissima in the native and invaded range

scientific article published on 30 September 2015

Multiple introgression events and range shifts inSchizocodon(Diapensiaceae) during the Pleistocene

scientific article published in 2013

Multiple spatial scale patterns of genetic diversity in riparian populations ofAinsliaea faurieana(Asteraceae) on Yakushima Island, Japan ⬇️

scientific article published on December 10, 2009

Natural hybridization patterns between widespread Calanthe discolor (Orchidaceae) and insular Calanthe izu-insularis on the oceanic Izu Islands

scholarly article

Negligible impact of deer-induced habitat degradation on the genetic diversity of extant Bombus diversus populations in comparison with museum specimens

New microsatellite markers recognize differences in tandem repeats among four related Gastrodia species (Orchidaceae)

scientific article published on 06 December 2019

Northern richness and southern poverty: contrasting genetic footprints of glacial refugia in the relictual treeSciadopitys verticillata(Coniferales: Sciadopityaceae)

Not an ancient relic: the endemic Livistona palms of arid central Australia could have been introduced by humans

scientific article (publication date: 7 July 2012)

Novel Nuclear Microsatellite Markers Reveal Genetic Diversity and Structure of Veronicastrum sibiricum var. zuccarinii (Plantaginaceae) in the Aso Region, Kyushu, Japan ⬇️

Outcrossing rates and organelle inheritance estimated from two natural populations of the Japanese endemic conifer Sciadopitys verticillata.

scientific article

Patterns and levels of gene flow in Rhododendron metternichii var. hondoense revealed by microsatellite analysis

article

Phylogeographic testing of alternative histories of single-origin versus parallel evolution of early flowering serpentine populations of Picris hieracioides L. (Asteraceae) in Japan

scientific article published in 2017

Phylogeography of an Australian termite, Amitermes laurensis (Isoptera, Termitidae), with special reference to the variety of mound shapes

scientific article published on 14 July 2006

Pollination efficiencies of flower-visiting insects as determined by direct genetic analysis of pollen origin.

scientific article published in August 2008

Polymorphic microsatellite DNA markers in the asiatic black bear Ursus thibetanus

scientific article published in October 2000

Population and genetic status of a critically endangered species in Korea, Euchresta japonica (Leguminosae), and their implications for conservation

Population and genetic status of a critically endangered species in Korea: Hydrangea luteovenosa (Hydrangeaceae)

Predominance of Unbalanced Gene Flow from Western to Central North Pacific Colonies of the Black-Footed Albatross (Phoebastria nigripes)

article

Predominance of a single clone of the most widely distributed bamboo species Phyllostachys edulis in East Asia.

scientific article published on 18 November 2015

Quaternary range-shift history of Japanese wingnut (<i>Pterocarya rhoifolia</i>) in the Japanese Archipelago evidenced from chloroplast DNA and ecological niche modeling

scientific article published in 2017

Recovery of genetic diversity in threatened plants through use of germinated seeds from herbarium specimens

article

Relatedness structure in Rhododendron metternichii var. hondoense revealed by microsatellite analysis.

scientific article published in March 2002

Relationships between bird-dispersed plants and avian fruit consumers with different feeding strategies in Japan

article

Relative importance of landscape features, stand structural attributes, and fruit availability on fruit-eating birds in Japanese forests fragmented by coniferous plantations

Seasonal and inter-island variation in the foraging strategy of the critically endangered Red-headed Wood PigeonColumba janthina nitensin disturbed island habitats derived from high-throughput sequencing

scientific article published in 2016

Seasonal changes in pollinator activity influence pollen dispersal and seed production of the alpine shrub Rhododendron aureum (Ericaceae).

scientific article published in April 2006

Shaping of genetic structure along Pleistocene and modern river systems in the hydrochorous riparian azalea, Rhododendron ripense (Ericaceae).

scientific article published on 6 July 2009

Short Communication. Some wild bamboo clumps contain more than one genet

scientific article published in 2008

Stable persistence of relict populations involved evolutionary shifts of reproductive characters in the genus Tanakaea (Saxifragaceae) ⬇️

scientific article published on 21 March 2022

Structure of phyllosphere fungal communities in a tropical dipterocarp plantation: A massively parallel next-generation sequencing analysis

scientific article published in 2016

Temporal variations in seed dispersal patterns of a bird-dispersed tree, Swida controversa (Cornaceae), in a temperate forest

scientific article published in 2015

The Sweat BeeLasioglossum occidensis a Potential Pollinator ofCalanthe aristuliferain the Oceanic Izu Islands

The population genomic signature of environmental association and gene flow in an ecologically divergent tree species Metrosideros polymorpha (Myrtaceae).

scientific article published on 18 January 2017

Time-lapse photography reveals the occurrence of unexpected bee-pollination in Calanthe izuinsularis, an endangered orchid endemic to the Izu archipelago

scientific article published in 2017

Timing of mowing influences genetic diversity and reproductive success in endangered semi-natural grassland plants

article

Turnover of southern cypresses in the post-Gondwanan world: extinction, transoceanic dispersal, adaptation and rediversification

scientific article published on 23 November 2018

Twenty novel polymorphic microsatellite primers in the critically endangered Melastoma tetramerum var. tetramerum (Melastomataceae).

scientific article published on 15 September 2016

Variation in pollen dispersal between years with different pollination conditions in a tropical emergent tree.

scientific article published on November 2004

Vertical Structure of Phyllosphere Fungal Communities in a Tropical Forest in Thailand Uncovered by High-Throughput Sequencing

scientific article

Wide-ranging Movement and Foraging Strategy of the Critically Endangered Red-headed Wood Pigeon (Columba janthina nitens): Findings from a Remote Uninhabited Island

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