List of works - Koki Horikoshi

A high-molecular-weight, alkaline, and thermostable β-1,4-xylanase of a subseafloor Microcella alkaliphila

scientific article published on 30 May 2016

A new high-alkaline alginate lyase from a deep-sea bacterium Agarivorans sp.

scientific article published on 13 November 2008

A novel beta-glucanase gene from Bacillus halodurans C-125.

scientific article published on July 2005

A pectate lyase from a deep subseafloor Georgenia muralis with unusual molecular characteristics

scientific article published on 11 September 2014

Aeropyrum camini sp. nov., a strictly aerobic, hyperthermophilic archaeon from a deep-sea hydrothermal vent chimney

scientific article

Alkalimonas collagenimarina sp. nov., a psychrotolerant, obligate alkaliphile isolated from deep-sea sediment

scientific article

Amphritea japonica sp. nov. and Amphritea balenae sp. nov., isolated from the sediment adjacent to sperm whale carcasses off Kagoshima, Japan

scientific article

An Alkali-Inducible Flotillin-like Protein fromBacillus haloduransC-125

scientific article published on 01 February 2005

Antibacterial activity of cyclodextrins against Bacillus strains.

scientific article published on 30 July 2008

Bacterial community shift along a subsurface geothermal water stream in a Japanese gold mine

scientific article published on 18 March 2005

Balnearium lithotrophicum gen. nov., sp. nov., a novel thermophilic, strictly anaerobic, hydrogen-oxidizing chemolithoautotroph isolated from a black smoker chimney in the Suiyo Seamount hydrothermal system

scientific article

Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin

scientific article (publication date: 21 February 2006)

Cell proliferation at 122 degrees C and isotopically heavy CH4 production by a hyperthermophilic methanogen under high-pressure cultivation

scientific article

Characterization of C1-metabolizing prokaryotic communities in methane seep habitats at the Kuroshima Knoll, southern Ryukyu Arc, by analyzing pmoA, mmoX, mxaF, mcrA, and 16S rRNA genes

scientific article

Characterization of alkaliphilic Bacillus strains used in industry: proposal of five novel species.

scientific article

Characterization of cold- and high-pressure-active polygalacturonases from a deep-sea yeast, Cryptococcus liquefaciens strain N6

scientific article published on 01 January 2006

Cloning and characterization of the rpoE gene encoding an RNA polymerase sigmaE factor from the deep-sea piezophilic Shewanella violacea strain DSS12.

scientific article

Cloning and overproduction of the rpoZ gene encoding an RNA polymerase omega subunit from a deep-sea piezophilic Shewanella violacea strain DSS12.

scientific article

Cloning and sequencing of alginate lyase genes from deep-sea strains of Vibrio and Agarivorans and characterization of a new Vibrio enzyme

article

Cloning and sequencing of inulinase and β-fructofuranosidase genes of a deep-sea Microbulbifer species and properties of recombinant enzymes

scientific article published on 27 January 2012

Cloning, expression, and characterization of a glycoside hydrolase family 86 beta-agarase from a deep-sea Microbulbifer-like isolate

scientific article

Collagenolytic subtilisin-like protease from the deep-sea bacterium Alkalimonas collagenimarina AC40T.

scientific article published on 4 November 2009

Colwellia piezophila sp. nov., a novel piezophilic species from deep-sea sediments of the Japan Trench.

scientific article

Cryptococcus surugaensis sp. nov., a novel yeast species from sediment collected on the deep-sea floor of Suruga Bay.

scientific article

Crystallization and preliminary X-ray study of alkaline mannanase from an alkaliphilic Bacillus isolate

scientific article published on 21 July 2004

Crystallization and preliminary X-ray study of alpha-glucosidase from Geobacillus sp strain HTA-462, one of the deepest sea bacteria

scientific article published on 27 June 2003

Crystallization and preliminary X-ray study of gamma-type cyclodextrin glycosyltransferase from Bacillus clarkii

scientific article published on 25 February 2004

Crystallization and preliminary X-ray study of isomaltodextranase from Arthrobacter globiformis

scientific article published on 25 February 2004

Culture-dependent and -independent characterization of microbial communities associated with a shallow submarine hydrothermal system occurring within a coral reef off Taketomi Island, Japan

scientific article

Deep-sea vent epsilon-proteobacterial genomes provide insights into emergence of pathogens

scholarly article

Deferribacter desulfuricans sp. nov., a novel sulfur-, nitrate- and arsenate-reducing thermophile isolated from a deep-sea hydrothermal vent

scientific article

Dermacoccus abyssi sp. nov., a piezotolerant actinomycete isolated from the Mariana Trench

scientific article

Dermacoccus barathri sp. nov. and Dermacoccus profundi sp. nov., novel actinomycetes isolated from deep-sea mud of the Mariana Trench

scientific article published in January 2007

Dermacoccus barathri sp. nov. and Dermacoccus profundi sp. nov., novel actinomycetes isolated from deep-sea mud of the Mariana Trench.

scientific article

Dermacozines, a new phenazine family from deep-sea dermacocci isolated from a Mariana Trench sediment.

scientific article

Desulfothermus okinawensis sp. nov., a thermophilic and heterotrophic sulfate-reducing bacterium isolated from a deep-sea hydrothermal field

scientific article

Development of 16S rRNA gene-targeted primers for detection of archaeal anaerobic methanotrophs (ANMEs).

scientific article published on 9 May 2009

Dipodascus tetrasporeus sp. nov., an ascosporogenous yeast isolated from deep-sea sediments in the Japan Trench

scientific article

Distribution and phylogenetic diversity of the subsurface microbial community in a Japanese epithermal gold mine ⬇️

scientific article published on May 13, 2003

Distribution, phylogenetic diversity and physiological characteristics of epsilon-Proteobacteria in a deep-sea hydrothermal field

scientific article published in October 2005

Diversity of actinomycetes isolated from Challenger Deep sediment (10,898 m) from the Mariana Trench.

scientific article

Enzymatic and genetic characterization of carbon and energy metabolisms by deep-sea hydrothermal chemolithoautotrophic isolates of Epsilonproteobacteria

scientific article

Enzymatic properties and nucleotide and amino acid sequences of a thermostable beta-agarase from the novel marine isolate, JAMB-A94.

scientific article

Exilispira thermophila gen. nov., sp. nov., an anaerobic, thermophilic spirochaete isolated from a deep-sea hydrothermal vent chimney.

scientific article

Extremely high alkaline protease from a deep-subsurface bacterium, Alkaliphilus transvaalensis

scientific article

Gene cluster of nitrous oxide reduction in the deep sea of mariana trench

scientific article published in June 2002

Genetic and biochemical characterization of the Pseudoalteromonas tetraodonis alkaline κ-carrageenase

scientific article published in January 2012

Genetic and functional properties of uncultivated thermophilic crenarchaeotes from a subsurface gold mine as revealed by analysis of genome fragments

scientific article

Genome Sequence of the Deep-Sea Denitrifier Pseudomonas sp. Strain MT-1, Isolated from the Mariana Trench

scientific article

Geochemical and microbiological evidence for a hydrogen-based, hyperthermophilic subsurface lithoautotrophic microbial ecosystem (HyperSLiME) beneath an active deep-sea hydrothermal field.

scientific article published on 9 April 2004

Geomicrobiological exploration and characterization of a novel deep-sea hydrothermal system at the TOTO caldera in the Mariana Volcanic Arc.

scientific article published on January 2006

High-level expression of a neoagarobiose-producing beta-agarase gene from Agarivorans sp. JAMB-A11 in Bacillus subtilis and enzymic properties of the recombinant enzyme

scientific article

Highly thermostable and surfactant-activated chitinase from a subseafloor bacterium, Laceyella putida

scientific article

Host-symbiont relationships in hydrothermal vent gastropods of the genus Alviniconcha from the Southwest Pacific

scientific article published on February 2006

Hydrogenimonas thermophila gen. nov., sp. nov., a novel thermophilic, hydrogen-oxidizing chemolithoautotroph within the epsilon-Proteobacteria, isolated from a black smoker in a Central Indian Ridge hydrothermal field

scientific article

Hydrogenivirga okinawensis sp. nov., a thermophilic sulfur-oxidizing chemolithoautotroph isolated from a deep-sea hydrothermal field, Southern Okinawa Trough.

scientific article

Hyperproduction and application of alpha-agarase to enzymatic enhancement of antioxidant activity of porphyran

scientific article published on December 2006

Identification and characterization of two alternative sigma factors of RNA polymerase in the deep-sea piezophilic bacterium Shewanella violacea, strain DSS12

Identification of rpoBC genes encoding for beta and beta' subunits of RNA polymerase in a deep-sea piezophilic bacterium, Shewanella violacea strain DSS12

article

Identification of the functional periplasmic nitrate reductase (nap) gene cluster from the deep-sea denitrifier Pseudomonas sp. strain MT-1.

scientific article published on 7 August 2007

Intragenomic diversity of the V1 regions of 16S rRNA genes in high-alkaline protease-producing Bacillus clausii spp.

scientific article published on 12 April 2007

Isolation and characterization of a feather-degrading enzyme from Bacillus pseudofirmus FA30-01.

scientific article published on 18 February 2006

Isolation and metabolic characteristics of previously uncultured members of the order aquificales in a subsurface gold mine

scientific article published in June 2002

Isolation and phylogenetic diversity of members of previously uncultivated epsilon-Proteobacteria in deep-sea hydrothermal fields

scientific article published in January 2003

Lateral gene transfer in the deep sea of Mariana Trench: identification of nar gene cluster encoding membrane-bound nitrate reductase from Pseudomonas sp. strain MT-1.

scientific article

Lebetimonas acidiphila gen. nov., sp. nov., a novel thermophilic, acidophilic, hydrogen-oxidizing chemolithoautotroph within the 'Epsilonproteobacteria', isolated from a deep-sea hydrothermal fumarole in the Mariana Arc.

scientific article

Marinithermus hydrothermalis gen. nov., sp. nov., a strictly aerobic, thermophilic bacterium from a deep-sea hydrothermal vent chimney

scientific article

Marinitoga okinawensis sp. nov., a novel thermophilic and anaerobic heterotroph isolated from a deep-sea hydrothermal field, Southern Okinawa Trough

scientific article

Marinobacter alkaliphilus sp. nov., a novel alkaliphilic bacterium isolated from subseafloor alkaline serpentine mud from Ocean Drilling Program Site 1200 at South Chamorro Seamount, Mariana Forearc

scientific article

Methanothermococcus okinawensis sp. nov., a thermophilic, methane-producing archaeon isolated from a Western Pacific deep-sea hydrothermal vent system

scientific article

Methanotorris formicicus sp. nov., a novel extremely thermophilic, methane-producing archaeon isolated from a black smoker chimney in the Central Indian Ridge

scientific article

Microbial communities associated with geological horizons in coastal subseafloor sediments from the sea of okhotsk.

scientific article

Microbial community in a sediment-hosted CO2 lake of the southern Okinawa Trough hydrothermal system

scientific article published on 07 September 2006

Microbial community in black rust exposed to hot ridge flank crustal fluids

scientific article

Microbial flora in the deepest sea mud of the Mariana Trench

article published in 2006

Microbulbifer agarilyticus sp. nov. and Microbulbifer thermotolerans sp. nov., agar-degrading bacteria isolated from deep-sea sediment.

scientific article

Molecular characterization of inorganic sulfur-compound metabolism in the deep-sea epsilonproteobacterium Sulfurovum sp. NBC37-1

scientific article published in 2010

Molecular phylogenetic analyses of reverse-transcribed bacterial rRNA obtained from deep-sea cold seep sediments

scientific article

Molecular phylogenetic and isotopic evidence of two lineages of chemoautotrophic endosymbionts distinct at the subdivision level harbored in one host-animal type: the genus Alviniconcha (Gastropoda: Provannidae).

scientific article published in August 2005

Moritella japonica sp. nov., a novel barophilic bacterium isolated from a Japan Trench sediment.

scientific article

Nar is the dominant dissimilatory nitrate reductase under high pressure conditions in the deep-sea denitrifier Pseudomonas sp. MT-1.

scientific article

Natronoarchaeum mannanilyticum gen. nov., sp. nov., an aerobic, extremely halophilic archaeon isolated from commercial salt

scientific article

Neptunomonas japonica sp. nov., an Osedax japonicus symbiont-like bacterium isolated from sediment adjacent to sperm whale carcasses off Kagoshima, Japan.

scientific article

New violet 3,3'-bipyridyl pigment purified from deep-sea microorganism Shewanella violacea DSS12.

scientific article published on 11 November 2006

Nitratiruptor tergarcus gen. nov., sp. nov. and Nitratifractor salsuginis gen. nov., sp. nov., nitrate-reducing chemolithoautotrophs of the epsilon-Proteobacteria isolated from a deep-sea hydrothermal system in the Mid-Okinawa Trough.

scientific article

Nitratiruptor tergarcus gen. nov., sp. nov. and Nitratifractor salsuginis gen. nov., sp. nov., nitrate-reducing chemolithoautotrophs of the ε-Proteobacteria isolated from a deep-sea hydrothermal system in the Mid-Okinawa Trough

erratum published in September 2005

Novel chemoautotrophic endosymbiosis between a member of the Epsilonproteobacteria and the hydrothermal-vent gastropod Alviniconcha aff. hessleri (Gastropoda: Provannidae) from the Indian Ocean

scientific article

Nucleotide and deduced amino acid sequences of a subtilisin-like serine protease from a deep-sea bacterium, Alkalimonas collagenimarina AC40(T).

scientific article published on 5 September 2007

Organic solvent tolerance of halophilic archaea

scientific article published in August 2003

Organic solvent tolerance of halophilic archaea, Haloarcula strains: effects of NaCl concentration on the tolerance and polar lipid composition

scientific article published in February 2005

Persephonella hydrogeniphila sp. nov., a novel thermophilic, hydrogen-oxidizing bacterium from a deep-sea hydrothermal vent chimney

scientific article

Phylogenetic and enzymatic diversity of deep subseafloor aerobic microorganisms in organics- and methane-rich sediments off Shimokita Peninsula.

scientific article published on 27 March 2008

Phylogenetic diversity of sulfate-reducing prokaryotes in active deep-sea hydrothermal vent chimney structures

scientific article published in March 2004

Phylogenetic relationship within the Erythrobasidium clade: molecular phylogenies, secondary structure, and intron positions inferred from partial sequences of ribosomal RNA and elongation factor-1alpha genes

scientific article published in February 2006

Physiological roles of two dissimilatory nitrate reductases in the deep-sea denitrifier Pseudomonas sp. strain MT-1.

scientific article

Povalibacter uvarum gen. nov., sp. nov., a polyvinyl-alcohol-degrading bacterium isolated from grapes

scientific article

Preparation and characterisation of nanofibrous cellulose plate as a new solid support for microbial culture

scientific article published on 01 August 2007

Protein-DNA interactions under high-pressure conditions, studied by capillary narrow-tube electrophoresis

scientific article

Psychromonas hadalis sp. nov., a novel piezophilic bacterium isolated from the bottom of the Japan Trench.

scientific article

Psychromonas japonica sp. nov., Psychromonas aquimarina sp. nov., Psychromonas macrocephali sp. nov. and Psychromonas ossibalaenae sp. nov., psychrotrophic bacteria isolated from sediment adjacent to sperm whale carcasses off Kagoshima, Japan.

scientific article

Psychromonas kaikoae sp. nov., a novel from the deepest piezophilic bacterium cold-seep sediments in the Japan Trench

scientific article

Purification and characterization of a novel alpha-agarase from a Thalassomonas sp.

scientific article

Putative homologs of SSK22 MAPKK kinase and PBS2 MAPK kinase of Saccharomyces cerevisiae encoded by os-4 and os-5 genes for osmotic sensitivity and fungicide resistance in Neurospora crassa

scientific article published in January 2003

Quantification of mcrA by quantitative fluorescent PCR in sediments from methane seep of the Nankai Trough.

scientific article published on July 2006

Reaction behaviors of glycine under super- and subcritical water conditions

scientific article published in February 2002

Reconstitution and Characterization of NtrC Protein in a Deep-sea Piezophilic Bacterium,Shewanella violaceaStrain DSS12 ⬇️

scientific article published on September 1, 2003

Rhodotorula benthica sp. nov. and Rhodotorula calyptogenae sp. nov., novel yeast species from animals collected from the deep-sea floor, and Rhodotorula lysiniphila sp. nov., which is related phylogenetically

scientific article

Rhodotorula pacifica sp. nov., a novel yeast species from sediment collected on the deep-sea floor of the north-west Pacific Ocean

scientific article

Salarchaeum japonicum gen. nov., sp. nov., an aerobic, extremely halophilic member of the Archaea isolated from commercial salt ⬇️

scientific article published on October 15, 2010

Salt-activated endoglucanase of a strain of alkaliphilic Bacillus agaradhaerens

scientific article published in February 2006

Sequence of the gene for a high-alkaline mannanase from an alkaliphilic Bacillus sp. strain JAMB-750, its expression in Bacillus subtilis and characterization of the recombinant enzyme

scientific article published on 6 July 2005

Shewanella surugensis sp. nov., Shewanella kaireitica sp. nov. and Shewanella abyssi sp. nov., isolated from deep-sea sediments of Suruga Bay, Japan

scientific article

Site-directed mutations in Alanine 223 and Glycine 255 in the acceptor site of gamma-Cyclodextrin glucanotransferase from Alkalophilic Bacillus clarkii 7364 affect cyclodextrin production

scientific article published on 21 July 2006

Spatial distribution of marine crenarchaeota group I in the vicinity of deep-sea hydrothermal systems

scientific article published on April 2004

Sulfurihydrogenibium subterraneum gen. nov., sp. nov., from a subsurface hot aquifer

scientific article

Sulfurimonas paralvinellae sp. nov., a novel mesophilic, hydrogen- and sulfur-oxidizing chemolithoautotroph within the Epsilonproteobacteria isolated from a deep-sea hydrothermal vent polychaete nest, reclassification of Thiomicrospira denitrificans

scientific article

Sulfurivirga caldicuralii gen. nov., sp. nov., a novel microaerobic, thermophilic, thiosulfate-oxidizing chemolithoautotroph, isolated from a shallow marine hydrothermal system occurring in a coral reef, Japan.

scientific article

Sulfurovum lithotrophicum gen. nov., sp. nov., a novel sulfur-oxidizing chemolithoautotroph within the -Proteobacteria isolated from Okinawa Trough hydrothermal sediments

scientific article (publication date: September 2004)

Thiobacter subterraneus gen. nov., sp. nov., an obligately chemolithoautotrophic, thermophilic, sulfur-oxidizing bacterium from a subsurface hot aquifer.

scientific article

Thiomicrospira thermophila sp. nov., a novel microaerobic, thermotolerant, sulfur-oxidizing chemolithomixotroph isolated from a deep-sea hydrothermal fumarole in the TOTO caldera, Mariana Arc, Western Pacific

scientific article

Thioreductor micantisoli gen. nov., sp. nov., a novel mesophilic, sulfur-reducing chemolithoautotroph within the epsilon-Proteobacteria isolated from hydrothermal sediments in the Mid-Okinawa Trough.

scientific article

Transcriptional regulation under pressure conditions by RNA polymerase sigma54 factor with a two-component regulatory system in Shewanella violacea

scientific article

Ureases of extreme halophiles of the genus Haloarcula with a unique structure of gene cluster

scientific article published on February 2004

Variability in microbial community and venting chemistry in a sediment-hosted backarc hydrothermal system: Impacts of subseafloor phase-separation

scientific article published on 01 September 2005

Variability in the microbial communities and hydrothermal fluid chemistry at the newly discovered Mariner hydrothermal field, southern Lau Basin

scholarly article

Versatile solidified nanofibrous cellulose-containing media for growth of extremophiles

scientific article published on May 2009

Williamsia marianensis sp. nov., a novel actinomycete isolated from the Mariana Trench.

scientific article

alpha-Glucosidase from a strain of deep-sea Geobacillus: a potential enzyme for the biosynthesis of complex carbohydrates.

scientific article published on 13 October 2005

List of works by Koki Horikoshi

A high-molecular-weight, alkaline, and thermostable β-1,4-xylanase of a subseafloor Microcella alkaliphila

A new high-alkaline alginate lyase from a deep-sea bacterium Agarivorans sp.

A novel beta-glucanase gene from Bacillus halodurans C-125.

A pectate lyase from a deep subseafloor Georgenia muralis with unusual molecular characteristics

Aeropyrum camini sp. nov., a strictly aerobic, hyperthermophilic archaeon from a deep-sea hydrothermal vent chimney

Alkalimonas collagenimarina sp. nov., a psychrotolerant, obligate alkaliphile isolated from deep-sea sediment

Amphritea japonica sp. nov. and Amphritea balenae sp. nov., isolated from the sediment adjacent to sperm whale carcasses off Kagoshima, Japan

An Alkali-Inducible Flotillin-like Protein fromBacillus haloduransC-125

Antibacterial activity of cyclodextrins against Bacillus strains.

Bacterial community shift along a subsurface geothermal water stream in a Japanese gold mine

Balnearium lithotrophicum gen. nov., sp. nov., a novel thermophilic, strictly anaerobic, hydrogen-oxidizing chemolithoautotroph isolated from a black smoker chimney in the Suiyo Seamount hydrothermal system

Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin

Cell proliferation at 122 degrees C and isotopically heavy CH4 production by a hyperthermophilic methanogen under high-pressure cultivation

Characterization of C1-metabolizing prokaryotic communities in methane seep habitats at the Kuroshima Knoll, southern Ryukyu Arc, by analyzing pmoA, mmoX, mxaF, mcrA, and 16S rRNA genes

Characterization of alkaliphilic Bacillus strains used in industry: proposal of five novel species.

Characterization of cold- and high-pressure-active polygalacturonases from a deep-sea yeast, Cryptococcus liquefaciens strain N6

Cloning and characterization of the rpoE gene encoding an RNA polymerase sigmaE factor from the deep-sea piezophilic Shewanella violacea strain DSS12.

Cloning and overproduction of the rpoZ gene encoding an RNA polymerase omega subunit from a deep-sea piezophilic Shewanella violacea strain DSS12.

Cloning and sequencing of alginate lyase genes from deep-sea strains of Vibrio and Agarivorans and characterization of a new Vibrio enzyme

Cloning and sequencing of inulinase and β-fructofuranosidase genes of a deep-sea Microbulbifer species and properties of recombinant enzymes

Cloning, expression, and characterization of a glycoside hydrolase family 86 beta-agarase from a deep-sea Microbulbifer-like isolate

Collagenolytic subtilisin-like protease from the deep-sea bacterium Alkalimonas collagenimarina AC40T.

Colwellia piezophila sp. nov., a novel piezophilic species from deep-sea sediments of the Japan Trench.

Cryptococcus surugaensis sp. nov., a novel yeast species from sediment collected on the deep-sea floor of Suruga Bay.

Crystallization and preliminary X-ray study of alkaline mannanase from an alkaliphilic Bacillus isolate

Crystallization and preliminary X-ray study of alpha-glucosidase from Geobacillus sp strain HTA-462, one of the deepest sea bacteria

Crystallization and preliminary X-ray study of gamma-type cyclodextrin glycosyltransferase from Bacillus clarkii

Crystallization and preliminary X-ray study of isomaltodextranase from Arthrobacter globiformis

Culture-dependent and -independent characterization of microbial communities associated with a shallow submarine hydrothermal system occurring within a coral reef off Taketomi Island, Japan

Deep-sea vent epsilon-proteobacterial genomes provide insights into emergence of pathogens

Deferribacter desulfuricans sp. nov., a novel sulfur-, nitrate- and arsenate-reducing thermophile isolated from a deep-sea hydrothermal vent

Dermacoccus abyssi sp. nov., a piezotolerant actinomycete isolated from the Mariana Trench

Dermacoccus barathri sp. nov. and Dermacoccus profundi sp. nov., novel actinomycetes isolated from deep-sea mud of the Mariana Trench

Dermacoccus barathri sp. nov. and Dermacoccus profundi sp. nov., novel actinomycetes isolated from deep-sea mud of the Mariana Trench.

Dermacozines, a new phenazine family from deep-sea dermacocci isolated from a Mariana Trench sediment.

Desulfothermus okinawensis sp. nov., a thermophilic and heterotrophic sulfate-reducing bacterium isolated from a deep-sea hydrothermal field

Development of 16S rRNA gene-targeted primers for detection of archaeal anaerobic methanotrophs (ANMEs).

Dipodascus tetrasporeus sp. nov., an ascosporogenous yeast isolated from deep-sea sediments in the Japan Trench

Distribution and phylogenetic diversity of the subsurface microbial community in a Japanese epithermal gold mine ⬇️

Distribution, phylogenetic diversity and physiological characteristics of epsilon-Proteobacteria in a deep-sea hydrothermal field

Diversity of actinomycetes isolated from Challenger Deep sediment (10,898 m) from the Mariana Trench.

Enzymatic and genetic characterization of carbon and energy metabolisms by deep-sea hydrothermal chemolithoautotrophic isolates of Epsilonproteobacteria

Enzymatic properties and nucleotide and amino acid sequences of a thermostable beta-agarase from the novel marine isolate, JAMB-A94.

Exilispira thermophila gen. nov., sp. nov., an anaerobic, thermophilic spirochaete isolated from a deep-sea hydrothermal vent chimney.

Extremely high alkaline protease from a deep-subsurface bacterium, Alkaliphilus transvaalensis

Gene cluster of nitrous oxide reduction in the deep sea of mariana trench

Genetic and biochemical characterization of the Pseudoalteromonas tetraodonis alkaline κ-carrageenase

Genetic and functional properties of uncultivated thermophilic crenarchaeotes from a subsurface gold mine as revealed by analysis of genome fragments

Genome Sequence of the Deep-Sea Denitrifier Pseudomonas sp. Strain MT-1, Isolated from the Mariana Trench

Geochemical and microbiological evidence for a hydrogen-based, hyperthermophilic subsurface lithoautotrophic microbial ecosystem (HyperSLiME) beneath an active deep-sea hydrothermal field.

Geomicrobiological exploration and characterization of a novel deep-sea hydrothermal system at the TOTO caldera in the Mariana Volcanic Arc.

High-level expression of a neoagarobiose-producing beta-agarase gene from Agarivorans sp. JAMB-A11 in Bacillus subtilis and enzymic properties of the recombinant enzyme

Highly thermostable and surfactant-activated chitinase from a subseafloor bacterium, Laceyella putida

Host-symbiont relationships in hydrothermal vent gastropods of the genus Alviniconcha from the Southwest Pacific

Hydrogenimonas thermophila gen. nov., sp. nov., a novel thermophilic, hydrogen-oxidizing chemolithoautotroph within the epsilon-Proteobacteria, isolated from a black smoker in a Central Indian Ridge hydrothermal field

Hydrogenivirga okinawensis sp. nov., a thermophilic sulfur-oxidizing chemolithoautotroph isolated from a deep-sea hydrothermal field, Southern Okinawa Trough.

Hyperproduction and application of alpha-agarase to enzymatic enhancement of antioxidant activity of porphyran

Identification and characterization of two alternative sigma factors of RNA polymerase in the deep-sea piezophilic bacterium Shewanella violacea, strain DSS12

Identification of rpoBC genes encoding for beta and beta' subunits of RNA polymerase in a deep-sea piezophilic bacterium, Shewanella violacea strain DSS12

Identification of the functional periplasmic nitrate reductase (nap) gene cluster from the deep-sea denitrifier Pseudomonas sp. strain MT-1.

Intragenomic diversity of the V1 regions of 16S rRNA genes in high-alkaline protease-producing Bacillus clausii spp.

Isolation and characterization of a feather-degrading enzyme from Bacillus pseudofirmus FA30-01.

Isolation and metabolic characteristics of previously uncultured members of the order aquificales in a subsurface gold mine

Isolation and phylogenetic diversity of members of previously uncultivated epsilon-Proteobacteria in deep-sea hydrothermal fields

Lateral gene transfer in the deep sea of Mariana Trench: identification of nar gene cluster encoding membrane-bound nitrate reductase from Pseudomonas sp. strain MT-1.

Lebetimonas acidiphila gen. nov., sp. nov., a novel thermophilic, acidophilic, hydrogen-oxidizing chemolithoautotroph within the 'Epsilonproteobacteria', isolated from a deep-sea hydrothermal fumarole in the Mariana Arc.

Marinithermus hydrothermalis gen. nov., sp. nov., a strictly aerobic, thermophilic bacterium from a deep-sea hydrothermal vent chimney

Marinitoga okinawensis sp. nov., a novel thermophilic and anaerobic heterotroph isolated from a deep-sea hydrothermal field, Southern Okinawa Trough

Marinobacter alkaliphilus sp. nov., a novel alkaliphilic bacterium isolated from subseafloor alkaline serpentine mud from Ocean Drilling Program Site 1200 at South Chamorro Seamount, Mariana Forearc

Methanothermococcus okinawensis sp. nov., a thermophilic, methane-producing archaeon isolated from a Western Pacific deep-sea hydrothermal vent system

Methanotorris formicicus sp. nov., a novel extremely thermophilic, methane-producing archaeon isolated from a black smoker chimney in the Central Indian Ridge

Microbial communities associated with geological horizons in coastal subseafloor sediments from the sea of okhotsk.

Microbial community in a sediment-hosted CO2 lake of the southern Okinawa Trough hydrothermal system

Microbial community in black rust exposed to hot ridge flank crustal fluids

Microbial flora in the deepest sea mud of the Mariana Trench

Microbulbifer agarilyticus sp. nov. and Microbulbifer thermotolerans sp. nov., agar-degrading bacteria isolated from deep-sea sediment.

Molecular characterization of inorganic sulfur-compound metabolism in the deep-sea epsilonproteobacterium Sulfurovum sp. NBC37-1

Molecular phylogenetic analyses of reverse-transcribed bacterial rRNA obtained from deep-sea cold seep sediments

Molecular phylogenetic and isotopic evidence of two lineages of chemoautotrophic endosymbionts distinct at the subdivision level harbored in one host-animal type: the genus Alviniconcha (Gastropoda: Provannidae).