List of works - Huzefa A. Raja

A class-wide phylogenetic assessment of Dothideomycetes

scientific article

A molecular phylogenetic assessment of Massarina ingoldiana sensu lato

scientific article

Acetophenone derivatives from a freshwater fungal isolate of recently described Lindgomyces madisonensis (G416). ⬇️

scientific article

Additional α-glucosidase inhibitors from Malbranchea flavorosea (Leotiomycetes, Ascomycota)

scientific article published on 17 July 2018

Additions to Lindgomyces (Lindgomycetaceae, Pleosporales, Dothideomycetes), including two new species occurring on submerged wood from North Carolina, USA, with notes on secondary metabolite profiles

article

Alkaloids from the Fungus Penicillium spathulatum as α-Glucosidase Inhibitors

scientific article published on 11 July 2016

An unusual Burkholderia gladioli double chain-initiating nonribosomal peptide synthetase assembles ‘fungal’ icosalide antibiotics

scientific article published on 25 April 2019

Antimicrobial fungal endophytes from the botanical medicine goldenseal (Hydrastis canadensis).

scientific article published on 6 August 2016

Apicidin Attenuates MRSA Virulence through Quorum-Sensing Inhibition and Enhanced Host Defense

scientific article published on 01 April 2019

Apoptotic activity of xanthoquinodin JBIR-99, from Parengyodontium album MEXU 30054, in PC-3 human prostate cancer cells

scientific article published on 18 August 2019

Bacterial symbionts that inhabit apothecia of the cup fungus Scutellinia scutellata

article published in 2013

Benzoquinones and terphenyl compounds as phosphodiesterase-4B inhibitors from a fungus of the order Chaetothyriales (MSX 47445).

scientific article published on 9 January 2013

Biochemometrics for Natural Products Research: Comparison of Data Analysis Approaches and Application to Identification of Bioactive Compounds

scientific article (publication date: 26 February 2016)

Biosynthesis of Fluorinated Peptaibols Using a Site-Directed Building Block Incorporation Approach

scientific article

Biosynthetic gene clusters and the evolution of fungal chemodiversity

scientific article published on 03 January 2020

Biosynthetically Distinct Cytotoxic Polyketides from Setophoma terrestris ⬇️

scientific article

Characterizing the Pathogenic, Genomic, and Chemical Traits of , a Close Relative of the Major Human Fungal Pathogen

scientific article published on 20 February 2019

ChemInform Abstract: New Nonadride Analogues from a Freshwater Isolate of an Undescribed Fungus Belonging to the Order Pleosporales

Chemoselective fluorination and chemoinformatic analysis of griseofulvin: Natural vs fluorinated fungal metabolites

scholarly article by Noemi D Paguigan published in October 2017

Comparison of the chemistry and diversity of endophytes isolated from wild-harvested and greenhouse-cultivated yerba mansa (Anemopsis californica). ⬇️

scientific article

Conioscypha peruviana sp. nov., its phylogenetic placement based on 28S rRNA gene, and a report of Conioscypha gracilis comb. nov. from Peru

article

Considerations and consequences of allowing DNA sequence data as types of fungal taxa

scientific article published in 2018

Correction to Enhanced Production and Anticancer Properties of Photoactivated Perylenequinones

scientific article published on 14 December 2020

Cytotoxic Naphthoquinone Analogues, Including Heterodimers, and Their Structure Elucidation Using LR-HSQMBC NMR Experiments

scientific article published on 02 October 2020

DNA barcoding for identification of consumer-relevant mushrooms: A partial solution for product certification?

scientific article published on 9 July 2016

Delitpyrones: α-Pyrone Derivatives from a Freshwater Delitschia sp ⬇️

scholarly article by José Rivera-Chávez et al published 17 July 2018 in Planta Medica

Dereplicating and Spatial Mapping of Secondary Metabolites from Fungal Cultures in Situ.

scientific article

Dioxomorpholines and Derivatives from a Marine-Facultative Aspergillus Species.

scientific article published on 10 August 2017

Distributional patterns of freshwater ascomycetes communities along an Andes to Amazon elevational gradient in Peru

Draft Genome Sequence of the Griseofulvin-Producing Fungus Xylaria flabelliformis Strain G536

scientific article published on 19 September 2019

Droplet probe: coupling chromatography to the in situ evaluation of the chemistry of nature

scientific article published on 21 May 2019

Drug Leads from Endophytic Fungi: Lessons Learned via Scaled Production

scientific article published on 26 March 2020

Endolichenic fungi: a new source of rich bioactive secondary metabolites on the horizon

Engineering Fluorine into Verticillins (Epipolythiodioxopiperazine Alkaloids) via Precursor-Directed Biosynthesis

scientific article published on 21 October 2019

Enhanced Production and Anticancer Properties of Photoactivated Perylenequinones

scientific article published on 10 August 2020

Enhanced dereplication of fungal cultures via use of mass defect filtering

scientific article

Evaluation of culture media for the production of secondary metabolites in a natural products screening program.

scientific article published on 17 December 2013

Families of Dothideomycetes

article

Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi

scientific article

Flavonolignans from Aspergillus iizukae, a fungal endophyte of milk thistle (Silybum marianum).

scientific article published on 23 January 2014

Fluorescence correlation spectroscopy in drug discovery: study of Alexa532-endothelin 1 binding to the endothelin ETA receptor to describe the pharmacological profile of natural products

scientific article published on 01 May 2012

Freshwater Ascomycetes: Jahnula purpurea (Jahnulales, Dothideomycetes), a new species on submerged wood from Martinique Island, Lesser Antilles

scientific article

Freshwater Fungi

scientific article published on 17 May 2018

Freshwater Fungi as a Source of Chemical Diversity: A Review

scientific article published in 2021

Freshwater ascomycetes: Alascospora evergladensis, a new genus and species from the Florida Everglades

scientific article

Freshwater ascomycetes: Aliquandostipite minuta (Jahnulales, Dothideomycetes), a new species from Florida

article

Freshwater ascomycetes: Coniochaeta gigantospora sp. nov. based on morphological and molecular data

scientific article published in 2012

Freshwater ascomycetes: Jahnula apiospora (Jahnulales, Dothideomycetes), a new species from Prince Edward Island, Canada

article

Freshwater ascomycetes: Minutisphaera (Dothideomycetes) revisited, including one new species from Japan.

scientific article

Freshwater ascomycetes: Natipusillaceae, a new family of tropical fungi, including Natipusilla bellaspora sp. nov. from the Peruvian Amazon.

scientific article

Freshwater ascomycetes: Wicklowia aquatica, a new genus and species in the Pleosporales from Florida and Costa Rica

article

Freshwater ascomycetes: new and noteworthy species from aquatic habitats in Florida

scientific article

Freshwater ascomycetes: two new species of Lindgomyces (Lindgomycetaceae, Pleosporales, Dothideomycetes) from Japan and USA.

scientific article

Fungal Identification Using Molecular Tools: A Primer for the Natural Products Research Community.

scientific article published on 15 February 2017

Fungal Planet description sheets: 371-399. ⬇️

scientific article

Fungal Planet description sheets: 469-557 ⬇️

scientific article

Fungal biodiversity in aquatic habitats

article

Fungal–fungal co-culture: a primer for generating chemical diversity

scientific article published in 2022

Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854

scientific article published in 2021

Genomic Characterization of Parengyodontium torokii sp. nov., a Biofilm-Forming Fungus Isolated from Mars 2020 Assembly Facility

scholarly article published in 2022

Genomic and Phenotypic Analysis of COVID-19-Associated Pulmonary Aspergillosis Isolates of Aspergillus fumigatus

scientific article published on 09 June 2021

Genomic and Phenotypic Trait Variation of the Opportunistic Human Pathogen Aspergillus flavus and Its Close Relatives

scientific article published in 2022

Genomic and phenotypic analysis of COVID-19-associated pulmonary aspergillosis isolates of Aspergillus fumigatus

scientific article published on 06 November 2020

Gliotoxin, a Known Virulence Factor in the Major Human Pathogen Aspergillus fumigatus, Is Also Biosynthesized by Its Nonpathogenic Relative Aspergillus fischeri

scientific article published on 11 February 2020

Greensporones: resorcylic acid lactones from an aquatic Halenospora sp. ⬇️

scientific article

In situ mass spectrometry monitoring of fungal cultures led to the identification of four peptaibols with a rare threonine residue ⬇️

article

Insights into the Chemical Diversity of Selected Fungi from the Tza Itzá Cenote of the Yucatan Peninsula

scientific article published on 28 March 2022

Isochromenones, isobenzofuranone, and tetrahydronaphthalenes produced by Paraphoma radicina, a fungus isolated from a freshwater habitat. ⬇️

scientific article

Jahnula species from North and Central America, including three new species

scientific article published in March 2006

Latitudinal, habitat and substrate distribution patterns of freshwater ascomycetes in the Florida Peninsula

article

Lindgomyces angustiascus, (Lindgomycetaceae, Pleosporales, Dothideomycetes), a new lignicolous species from freshwater habitats in the USA

scientific article published in September 2013

Lucidascocarpa pulchella, a new ascomycete genus and species from freshwater habitats in the American tropics

scientific article

Mapping the Fungal Battlefield: Using Chemistry and Deletion Mutants to Monitor Interspecific Chemical Interactions Between Fungi

scientific article published on 19 February 2019

Media and strain studies for the scaled production of cis-enone resorcylic acid lactones as feedstocks for semisynthesis

scientific article published on 21 June 2021

Media studies to enhance the production of verticillins facilitated by in situ chemical analysis

scientific article published on 27 September 2018

Meroterpenoids from Neosetophoma sp.: A Dioxa[4.3.3]propellane Ring System, Potent Cytotoxicity, and Prolific Expression ⬇️

scientific article published on 08 January 2019

Metabolites from the Marine-Facultative Aspergillus sp. MEXU 27854 and Gymnoascus hyalinosporus MEXU 29901 from Caleta Bay, Mexico ⬇️

scientific article published on 20 May 2019

Minutisphaerales (Dothideomycetes, Ascomycota): a new order of freshwater ascomycetes including a new family, Minutisphaeraceae, and two new species from North Carolina, USA.

scientific article

Mycopyranone: a 8,8'-binaphthopyranone with potent anti-MRSA activity from the fungus Phialemoniopsis sp

scientific article published on 17 January 2019

Naming and outline of Dothideomycetes-2014 including proposals for the protection or suppression of generic names

scientific article

New Nonadride Analogues from a Freshwater Isolate of an Undescribed Fungus Belonging to the Order Pleosporales

article published in 2010

New diketopiperazine dimer from a filamentous fungal isolate of Aspergillus sydowii

scientific article

New species and new records of freshwater ascomycetes from Brazil and Costa Rica.

scientific article

New tricks for old dogs: Two new macrocyclic trichothecene epimers and absolute configuration of 16-hydroxyverrucarin B

scientific article published on 10 January 2020

Notes for genera: Ascomycota

scientific article published in 2017

Optimizing production and evaluating biosynthesis in situ of a herbicidal compound, mevalocidin, from Coniolariella sp.

scientific article

Orthogonal Method for Double-Bond Placement via Ozone-Induced Dissociation Mass Spectrometry (OzID-MS)

scientific article published on 11 December 2019

Pannorin B, a new naphthopyrone from an endophytic fungal isolate of Penicillium sp.

scientific article published on 14 September 2015

Pathogenic Allodiploid Hybrids of Aspergillus Fungi

scientific article published on 28 May 2020

Peptaibols, tetramic acid derivatives, isocoumarins, and sesquiterpenes from a Bionectria sp. (MSX 47401). ⬇️

scientific article published on 19 June 2013

Phylogenetic Diversity of Sponge-Associated Fungi from the Caribbean and the Pacific of Panama and Their In Vitro Effect on Angiotensin and Endothelin Receptors

scientific article published on 31 May 2015

Phylogenetic and chemical diversity of fungal endophytes isolated from Silybum marianum (L) Gaertn. (milk thistle)

scientific article published on January 2015

Phylogenetic relationships among taxa in the Jahnulales inferred from 18S and 28S nuclear ribosomal DNA sequences

scholarly article by Jinx Campbell et al published September 2007 in Canadian Journal of Botany

Phylogeny and morphology of dematiaceous freshwater microfungi from Perú.

scientific article

Polyhydroxyanthraquinones as quorum sensing inhibitors from the guttates of Penicillium restrictum and their analysis by desorption electrospray ionization mass spectrometry ⬇️

scientific article

Polyphasic Approach Utilized for the Identification of Two New Toxigenic Members of Penicillium Section Exilicaulis, P. krskae and P. silybi spp. nov.

scholarly article published in 2021

Prealamethicin F50 and related peptaibols from Trichoderma arundinaceum: Validation of their authenticity via in situ chemical analysis.

scientific article published on 25 September 2017

Prenylated Diresorcinols Inhibit Bacterial Quorum Sensing

scientific article published on 07 February 2019

Recommendations for competing sexual-asexually typified generic names in Sordariomycetes (except Diaporthales, Hypocreales, and Magnaporthales)

scientific article

Recommended names for pleomorphic genera in Dothideomycetes

scientific article

Safety assessment of mushrooms in dietary supplements by combining analytical data with in silico toxicology evaluation

scientific article

Secondary Metabolites from Fungal Endophytes of Echinacea purpurea Suppress Cytokine Secretion by Macrophage-Type Cells

scientific article

Some Freshwater Fungi from the Brazilian Semi-Arid Region, Including Two New Species of Hyphomycetes

article

Sorbicillinoid analogs with cytotoxic and selective anti-Aspergillus activities from Scytalidium album ⬇️

scientific article

Spatial and Temporal Profiling of Griseofulvin Production in Xylaria cubensis Using Mass Spectrometry Mapping

scientific article (publication date: 2016)

Spiroscytalin, a new tetramic acid and other metabolites of mixed biogenesis from Scytalidium cuboideum. ⬇️

scientific article

Structural Diversity of Perylenequinones Is Driven by Their Redox Behavior

scientific article published on 25 January 2022

Talarolutins A-D: Meroterpenoids from an endophytic fungal isolate of Talaromyces minioluteus. ⬇️

scientific article published on 2 April 2016

Testing the phylogenetic utility of MCM7 in the Ascomycota

scientific article

The Chemistry of Kratom [Mitragyna speciosa]: Updated Characterization Data and Methods to Elucidate Indole and Oxindole Alkaloids

scientific article published on 29 June 2020

The genus Podaxis in arid regions of Mexico: preliminary ITS phylogeny and ethnomycological use

scientific article published in 2017

Trachymyrmex septentrionalis ants promote fungus garden hygiene using Trichoderma -derived metabolite cues

scientific article published on 13 November 2022

Variation Among Biosynthetic Gene Clusters, Secondary Metabolite Profiles, and Cards of Virulence Across Aspergillus Species

scientific article published on 17 August 2020

Waol A, trans-dihydrowaol A, and cis-dihydrowaol A: polyketide-derived γ-lactones from a Volutella species. ⬇️

scientific article published on August 2013

Wheldone: Characterization of a Unique Scaffold from the Coculture of Aspergillus fischeri and Xylaria flabelliformis ⬇️

scientific article published on 25 February 2020

ants promote fungus garden hygiene using -derived metabolite cues

scientific article published on 20 June 2023

qNMR for profiling the production of fungal secondary metabolites

scientific article published on 26 December 2016

α-Glucosidase and PTP-1B Inhibitors from <i>Malbranchea dendritica</i>

scientific article published on 25 August 2021

α-Glucosidase and Protein Tyrosine Phosphatase 1B Inhibitors from Malbranchea circinata

scientific article published on 03 January 2020

α-Pyrone derivatives, tetra/hexahydroxanthones, and cyclodepsipeptides from two freshwater fungi. ⬇️

scientific article published on December 2016

ω-Hydroxyemodin limits staphylococcus aureus quorum sensing-mediated pathogenesis and inflammation.

scientific article

List of works by Huzefa A. Raja

A class-wide phylogenetic assessment of Dothideomycetes

A molecular phylogenetic assessment of Massarina ingoldiana sensu lato

Acetophenone derivatives from a freshwater fungal isolate of recently described Lindgomyces madisonensis (G416). ⬇️

Additional α-glucosidase inhibitors from Malbranchea flavorosea (Leotiomycetes, Ascomycota)

Additions to Lindgomyces (Lindgomycetaceae, Pleosporales, Dothideomycetes), including two new species occurring on submerged wood from North Carolina, USA, with notes on secondary metabolite profiles

Alkaloids from the Fungus Penicillium spathulatum as α-Glucosidase Inhibitors

An unusual Burkholderia gladioli double chain-initiating nonribosomal peptide synthetase assembles ‘fungal’ icosalide antibiotics

Antimicrobial fungal endophytes from the botanical medicine goldenseal (Hydrastis canadensis).

Apicidin Attenuates MRSA Virulence through Quorum-Sensing Inhibition and Enhanced Host Defense

Apoptotic activity of xanthoquinodin JBIR-99, from Parengyodontium album MEXU 30054, in PC-3 human prostate cancer cells

Bacterial symbionts that inhabit apothecia of the cup fungus Scutellinia scutellata

Benzoquinones and terphenyl compounds as phosphodiesterase-4B inhibitors from a fungus of the order Chaetothyriales (MSX 47445).

Biochemometrics for Natural Products Research: Comparison of Data Analysis Approaches and Application to Identification of Bioactive Compounds

Biosynthesis of Fluorinated Peptaibols Using a Site-Directed Building Block Incorporation Approach

Biosynthetic gene clusters and the evolution of fungal chemodiversity

Biosynthetically Distinct Cytotoxic Polyketides from Setophoma terrestris ⬇️

Characterizing the Pathogenic, Genomic, and Chemical Traits of , a Close Relative of the Major Human Fungal Pathogen

ChemInform Abstract: New Nonadride Analogues from a Freshwater Isolate of an Undescribed Fungus Belonging to the Order Pleosporales

Chemoselective fluorination and chemoinformatic analysis of griseofulvin: Natural vs fluorinated fungal metabolites

Comparison of the chemistry and diversity of endophytes isolated from wild-harvested and greenhouse-cultivated yerba mansa (Anemopsis californica). ⬇️

Conioscypha peruviana sp. nov., its phylogenetic placement based on 28S rRNA gene, and a report of Conioscypha gracilis comb. nov. from Peru

Considerations and consequences of allowing DNA sequence data as types of fungal taxa

Correction to Enhanced Production and Anticancer Properties of Photoactivated Perylenequinones

Cytotoxic Naphthoquinone Analogues, Including Heterodimers, and Their Structure Elucidation Using LR-HSQMBC NMR Experiments

DNA barcoding for identification of consumer-relevant mushrooms: A partial solution for product certification?

Delitpyrones: α-Pyrone Derivatives from a Freshwater Delitschia sp ⬇️

Dereplicating and Spatial Mapping of Secondary Metabolites from Fungal Cultures in Situ.

Dioxomorpholines and Derivatives from a Marine-Facultative Aspergillus Species.

Distributional patterns of freshwater ascomycetes communities along an Andes to Amazon elevational gradient in Peru

Draft Genome Sequence of the Griseofulvin-Producing Fungus Xylaria flabelliformis Strain G536

Droplet probe: coupling chromatography to the in situ evaluation of the chemistry of nature

Drug Leads from Endophytic Fungi: Lessons Learned via Scaled Production

Endolichenic fungi: a new source of rich bioactive secondary metabolites on the horizon

Engineering Fluorine into Verticillins (Epipolythiodioxopiperazine Alkaloids) via Precursor-Directed Biosynthesis

Enhanced Production and Anticancer Properties of Photoactivated Perylenequinones

Enhanced dereplication of fungal cultures via use of mass defect filtering

Evaluation of culture media for the production of secondary metabolites in a natural products screening program.

Families of Dothideomycetes

Finding needles in haystacks: linking scientific names, reference specimens and molecular data for Fungi

Flavonolignans from Aspergillus iizukae, a fungal endophyte of milk thistle (Silybum marianum).

Fluorescence correlation spectroscopy in drug discovery: study of Alexa532-endothelin 1 binding to the endothelin ETA receptor to describe the pharmacological profile of natural products

Freshwater Ascomycetes: Jahnula purpurea (Jahnulales, Dothideomycetes), a new species on submerged wood from Martinique Island, Lesser Antilles

Freshwater Fungi

Freshwater Fungi as a Source of Chemical Diversity: A Review

Freshwater ascomycetes: Alascospora evergladensis, a new genus and species from the Florida Everglades

Freshwater ascomycetes: Aliquandostipite minuta (Jahnulales, Dothideomycetes), a new species from Florida

Freshwater ascomycetes: Coniochaeta gigantospora sp. nov. based on morphological and molecular data

Freshwater ascomycetes: Jahnula apiospora (Jahnulales, Dothideomycetes), a new species from Prince Edward Island, Canada

Freshwater ascomycetes: Minutisphaera (Dothideomycetes) revisited, including one new species from Japan.

Freshwater ascomycetes: Natipusillaceae, a new family of tropical fungi, including Natipusilla bellaspora sp. nov. from the Peruvian Amazon.

Freshwater ascomycetes: Wicklowia aquatica, a new genus and species in the Pleosporales from Florida and Costa Rica

Freshwater ascomycetes: new and noteworthy species from aquatic habitats in Florida

Freshwater ascomycetes: two new species of Lindgomyces (Lindgomycetaceae, Pleosporales, Dothideomycetes) from Japan and USA.

Fungal Identification Using Molecular Tools: A Primer for the Natural Products Research Community.

Fungal Planet description sheets: 371-399. ⬇️

Fungal Planet description sheets: 469-557 ⬇️

Fungal biodiversity in aquatic habitats

Fungal–fungal co-culture: a primer for generating chemical diversity

Genome Mining and Molecular Networking-Based Metabolomics of the Marine Facultative Aspergillus sp. MEXU 27854

Genomic Characterization of Parengyodontium torokii sp. nov., a Biofilm-Forming Fungus Isolated from Mars 2020 Assembly Facility

Genomic and Phenotypic Analysis of COVID-19-Associated Pulmonary Aspergillosis Isolates of Aspergillus fumigatus

Genomic and Phenotypic Trait Variation of the Opportunistic Human Pathogen Aspergillus flavus and Its Close Relatives

Genomic and phenotypic analysis of COVID-19-associated pulmonary aspergillosis isolates of Aspergillus fumigatus

Gliotoxin, a Known Virulence Factor in the Major Human Pathogen Aspergillus fumigatus, Is Also Biosynthesized by Its Nonpathogenic Relative Aspergillus fischeri

Greensporones: resorcylic acid lactones from an aquatic Halenospora sp. ⬇️

In situ mass spectrometry monitoring of fungal cultures led to the identification of four peptaibols with a rare threonine residue ⬇️

Insights into the Chemical Diversity of Selected Fungi from the Tza Itzá Cenote of the Yucatan Peninsula

Isochromenones, isobenzofuranone, and tetrahydronaphthalenes produced by Paraphoma radicina, a fungus isolated from a freshwater habitat. ⬇️

Jahnula species from North and Central America, including three new species

Latitudinal, habitat and substrate distribution patterns of freshwater ascomycetes in the Florida Peninsula

Lindgomyces angustiascus, (Lindgomycetaceae, Pleosporales, Dothideomycetes), a new lignicolous species from freshwater habitats in the USA

Lucidascocarpa pulchella, a new ascomycete genus and species from freshwater habitats in the American tropics

Mapping the Fungal Battlefield: Using Chemistry and Deletion Mutants to Monitor Interspecific Chemical Interactions Between Fungi

Media and strain studies for the scaled production of cis-enone resorcylic acid lactones as feedstocks for semisynthesis

Media studies to enhance the production of verticillins facilitated by in situ chemical analysis

Meroterpenoids from Neosetophoma sp.: A Dioxa[4.3.3]propellane Ring System, Potent Cytotoxicity, and Prolific Expression ⬇️

Metabolites from the Marine-Facultative Aspergillus sp. MEXU 27854 and Gymnoascus hyalinosporus MEXU 29901 from Caleta Bay, Mexico ⬇️

Minutisphaerales (Dothideomycetes, Ascomycota): a new order of freshwater ascomycetes including a new family, Minutisphaeraceae, and two new species from North Carolina, USA.

Mycopyranone: a 8,8'-binaphthopyranone with potent anti-MRSA activity from the fungus Phialemoniopsis sp