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List of works by Gavin J.D. Smith

A Report of Adult Human Adenovirus Infections in a Tertiary Hospital

scientific article

Adaptation of pandemic H2N2 influenza A viruses in humans.

scientific article

Adaptive evolution during the establishment of European avian-like H1N1 influenza A virus in swine.

scientific article published on 24 October 2017

Analysis of H5N1 avian influenza infections from wild bird surveillance in Hong Kong from January 2006 to October 2007.

scientific article published on April 2009

Ancient origins determine global biogeography of hot and cold desert cyanobacteria

scientific article (publication date: 25 January 2011)

Antigenic and molecular characterization of avian influenza A(H9N2) viruses, Bangladesh

scientific article published on January 2013

Antigenic profile of avian H5N1 viruses in Asia from 2002 to 2007.

scientific article

Avian Influenza A(H9N2) Virus in Poultry Worker, Pakistan, 2015

scientific article published on 01 January 2019

Avian flu: H5N1 virus outbreak in migratory waterfowl.

scientific article published in July 2005

Avian influenza A virus (H5N1) outbreaks, Kuwait, 2007.

scientific article published on June 2008

Avian influenza H5N1 in viverrids: implications for wildlife health and conservation.

scientific article published in July 2006

Avian influenza viruses in humans: lessons from past outbreaks

scientific article published on 01 December 2019

Characteristics of acute febrile illness and determinants of illness recovery among adults presenting to Singapore primary care clinics

scientific article

Characterization of avian influenza viruses A (H5N1) from wild birds, Hong Kong, 2004-2008.

scientific article published on March 2009

Characterization of low-pathogenic H5 subtype influenza viruses from Eurasia: implications for the origin of highly pathogenic H5N1 viruses

scientific article published on 16 May 2007

Characterizing Emerging Canine H3 Influenza Viruses

scientific article published on 14 April 2020

Clinical and Molecular Epidemiology of Human Parainfluenza Viruses 1-4 in Children from Viet Nam

scientific article published in Scientific Reports

Co-circulation of both low and highly pathogenic avian influenza H5 viruses in current poultry epidemics in Taiwan

scientific article published on 01 January 2020

Community structure of free-floating filamentous cyanobacterial mats from the Wonder Lake geothermal springs in the Philippines

scientific article published in July 2005

Correction for Joseph et al., Adaptation of pandemic H2N2 influenza A viruses in humans

scientific article published on April 2015

Dating the emergence of pandemic influenza viruses

scientific article

Deep Sequencing of Influenza A Virus from a Human Challenge Study Reveals a Selective Bottleneck and Only Limited Intrahost Genetic Diversification

scientific article published on 05 October 2016

Detection and genetic characterization of diverse Bartonella genotypes in the small mammals of Singapore.

scientific article published on 12 December 2017

Detection and phylogenetic analysis of group 1 coronaviruses in South American bats

scientific article published on December 2008

Detection of Recombinant Rousettus Bat Coronavirus GCCDC1 in Lesser Dawn Bats (Eonycteris spelaea) in Singapore

scientific article published on 14 May 2020

Detection of a novel and highly divergent coronavirus from asian leopard cats and Chinese ferret badgers in Southern China.

scientific article published on 25 April 2007

Detection of a novel astrovirus from a black-naped monarch (Hypothymis azurea) in Cambodia.

scientific article

Detection of diverse astroviruses from bats in China

scientific article

Detection of novel astroviruses in urban brown rats and previously known astroviruses in humans

scientific article

Discovery and Characterization of Novel Bat Coronavirus Lineages from Kazakhstan

scientific article published on 17 April 2019

Discovery and Genomic Characterization of a 382-Nucleotide Deletion in ORF7b and ORF8 during the Early Evolution of SARS-CoV-2

scientific article published on 21 July 2020

Discovery of a 382-nt deletion during the early evolution of SARS-CoV-2

scientific article (preprint)

Distribution of amantadine-resistant H5N1 avian influenza variants in Asia.

scientific article published on 9 May 2006

Divergent evolutionary trajectories of influenza B viruses underlie their contemporaneous epidemic activity

scientific article published on 16 December 2019

Diversity and Evolution of Viral Pathogen Community in Cave Nectar Bats (Eonycteris spelaea)

scientific article published on 12 March 2019

Early induction of functional SARS-CoV-2-specific T cells associates with rapid viral clearance and mild disease in COVID-19 patients

scholarly article by Anthony T Tan published in 2021

Ecological Drivers of Virus Evolution: Astrovirus as a Case Study

scientific article published on 6 May 2015

Ecology of bat flies in Singapore: A study on the diversity, infestation bias and host specificity (Diptera: Nycteribiidae)

scientific article published on 01 May 2020

Ecosystem Interactions Underlie the Spread of Avian Influenza A Viruses with Pandemic Potential

scientific article

Effects of a major deletion in the SARS-CoV-2 genome on the severity of infection and the inflammatory response: an observational cohort study

scientific article published on 18 August 2020

Emergence and epidemic occurrence of enterovirus 68 respiratory infections in The Netherlands in 2010.

scientific article published on 15 December 2011

Emergence and predominance of an H5N1 influenza variant in China.

scientific article

Establishment of an H6N2 influenza virus lineage in domestic ducks in southern China

scientific article

Establishment of influenza A virus (H6N1) in minor poultry species in southern China.

scientific article

Establishment of multiple sublineages of H5N1 influenza virus in Asia: Implications for pandemic control

scientific article (publication date: 10 February 2006)

Evidence for antigenic seniority in influenza A (H3N2) antibody responses in southern China

scientific article

Evidence of canine parvovirus transmission to a civet cat (Paradoxurus musangus) in Singapore

scientific article published on 30 July 2016

Evolution and adaptation of H5N1 influenza virus in avian and human hosts in Indonesia and Vietnam.

scientific article

Evolution and molecular epidemiology of H9N2 influenza A viruses from quail in southern China, 2000 to 2005.

scientific article

Evolution of Influenza B Virus in Kuala Lumpur, Malaysia, between 1995 and 2008.

scientific article

Evolutionary dynamics and emergence of panzootic H5N1 influenza viruses.

scientific article

Evolutionary insights into the ecology of coronaviruses.

scientific article

Fatal outcome of human influenza A (H5N1) is associated with high viral load and hypercytokinemia

scientific article

Feasibility of reconstructed ancestral H5N1 influenza viruses for cross-clade protective vaccine development

scientific article

Filovirus-reactive antibodies in humans and bats in Northeast India imply zoonotic spillover

scientific article published on 31 October 2019

Gene flow and competitive exclusion of avian influenza A virus in natural reservoir hosts

scientific article published on 05 June 2009

Genesis of a highly pathogenic and potentially pandemic H5N1 influenza virus in eastern Asia.

scientific article

Genetic analysis

scientific article published in January 2012

Genetic diversity of respiratory enteroviruses and rhinoviruses in febrile adults, Singapore, 2007-2013

scientific article published on 30 September 2019

Genetic evolution of the neuraminidase of influenza A (H3N2) viruses from 1968 to 2009 and its correspondence to haemagglutinin evolution

scientific article published on 20 June 2012

Genetic status of Asiatic black bear (Ursus thibetanus) reintroduced into South Korea based on mitochondrial DNA and microsatellite loci analysis

scientific article published on 15 February 2011

High diversity of medically important gastrointestinal rodent-borne helminths in Singapore.

scientific article published on 19 December 2017

Human infection with an avian H9N2 influenza A virus in Hong Kong in 2003.

scientific article

Identification of the progenitors of Indonesian and Vietnamese avian influenza A (H5N1) viruses from southern China

scientific article

Influence of age and body condition on astrovirus infection of bats in Singapore: An evolutionary and epidemiological analysis

scientific article published on 6 October 2017

Influenza

Influenza A virus evolution and spatio-temporal dynamics in Eurasian wild birds: a phylogenetic and phylogeographical study of whole-genome sequence data

scientific article

Influenza a virus migration and persistence in North American wild birds

scientific article

Isolation of Highly Pathogenic H5N1 Influenza Viruses in 2009-2013 in Vietnam

scientific article published on 25 June 2019

Lack of cross-neutralization by SARS patient sera towards SARS-CoV-2

scientific article published on 01 December 2020

Location-specific patterns of exposure to recent pre-pandemic strains of influenza A in southern China

scientific article

Long-term evolution and transmission dynamics of swine influenza A virus

scientific article

Molecular analysis of avian H7 influenza viruses circulating in Eurasia in 1999-2005: detection of multiple reassortant virus genotypes

scientific article published in January 2008

Monitoring of Newcastle disease virus in environmental samples.

scientific article published on 2 June 2017

Multiannual patterns of influenza A transmission in Chinese live bird market systems.

scientific article

Multilocus sequence analysis of Treponema denticola strains of diverse origin.

scientific article published on 4 February 2013

Multiple sublineages of influenza A virus (H5N1), Vietnam, 2005-2007.

scientific article published on April 2008

No evidence for intra-segment recombination of 2009 H1N1 influenza virus in swine

scientific article published on 30 October 2011

Nomenclature updates resulting from the evolution of avian influenza A(H5) virus clades 2.1.3.2a, 2.2.1, and 2.3.4 during 2013-2014

scientific article published on September 2015

Nuclear factor 90 negatively regulates influenza virus replication by interacting with viral nucleoprotein

scientific article

Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic

scientific article (publication date: 25 June 2009)

Oseltamivir resistance during treatment of influenza A (H5N1) infection

scientific article (publication date: 22 December 2005)

Patterns of medication use and factors associated with antibiotic use among adult fever patients at Singapore primary care clinics.

scientific article

Phylodynamics of H1N1/2009 influenza reveals the transition from host adaptation to immune-driven selection

scientific article published on 06 August 2015

Phylogeny of the basal angiosperm genus Pseuduvaria (Annonaceae) inferred from five chloroplast DNA regions, with interpretation of morphological character evolution.

scientific article

Prevalence and Phylogenetics of H9n2 in Backyard and Commercial Poultry in Pakistan

scientific article published on 01 December 2018

Prevalence and genetic diversity of coronaviruses in bats from China

scientific article

RNA Virus Reassortment: An Evolutionary Mechanism for Host Jumps and Immune Evasion.

scientific article published on 9 July 2015

Reassortment of pandemic H1N1/2009 influenza A virus in swine

scientific article published on 18 June 2010

Robust dengue virus infection in bat cells and limited innate immune responses coupled with positive serology from bats in IndoMalaya and Australasia

scientific article published on 27 July 2019

Serologic Evidence of Fruit Bat Exposure to Filoviruses, Singapore, 2011-2016.

scientific article published in January 2018

Serologic survey of pandemic (H1N1) 2009 virus, Guangxi Province, China

scientific article

Seroprevalence and awareness of porcine cysticercosis across different pig production systems in south-central Cambodia.

scientific article published on 9 November 2017

Surveillance and characterisation of influenza viruses among patients with influenza-like illness in Bali, Indonesia, July 2010-June 2014

scientific article published on 07 March 2019

Temporally structured metapopulation dynamics and persistence of influenza A H3N2 virus in humans

scientific article

The contrasting phylodynamics of human influenza B viruses.

scientific article

The ecology and adaptive evolution of influenza A interspecies transmission

scientific article

The effective rate of influenza reassortment is limited during human infection

scientific article

The emergence and diversification of panzootic H5N1 influenza viruses ⬇️

scientific article published on June 2, 2013

The emergence of pandemic influenza viruses

scientific article

The recent establishment of North American H10 lineage influenza viruses in Australian wild waterfowl and the evolution of Australian avian influenza viruses

scientific article

The temporal RNA virome patterns of a lesser dawn bat (Eonycteris spelaea) colony revealed by deep sequencing

scientific article published in 2020

Transmissibility of pandemic H1N1 and genetically related swine influenza viruses in ferrets.

scientific article

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