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List of works by Katy Wolstencroft

A Little Semantic Web Goes a Long Way in Biology

article by K. Wolstencroft et al published 2005 in Lecture Notes in Computer Science

A comprehensive gene expression analysis at sequential stages of in vitro cardiac differentiation from isolated MESP1-expressing-mesoderm progenitors

scientific article published on 19 January 2016

A physiome interoperability roadmap for personalized drug development.

scientific article published on April 2016

A systematic strategy for large-scale analysis of genotype phenotype correlations: identification of candidate genes involved in African trypanosomiasis

scientific article (publication date: 2007)

A systematic strategy for the discovery of candidate genes responsible for phenotypic variation.

scientific article published on 20 November 2007

Addendum: The FAIR Guiding Principles for scientific data management and stewardship

article by Mark D Wilkinson et al published 19 March 2019 in Scientific Data

An experimental workflow development platform for historical document digitisation and analysis

article

Analysing Scientific Workflows: Why Workflows Not Only Connect Web Services

Applying OWL Reasoning to Genomic Data

article

Benchmarking workflow discovery: a case study from bioinformatics

BioCatalogue: A Curated Web Service Registry For The Life Science Community

BioCatalogue: a universal catalogue of web services for the life sciences

scientific article (publication date: July 2010)

Community-driven computational biology with Debian Linux

scientific article (publication date: 21 December 2010)

Constructing ontology-driven protein family databases.

scientific article

Data curation + process curation=data integration + science

scientific article

Establishing a consensus for the hallmarks of cancer based on gene ontology and pathway annotations

scientific article published on 06 April 2021

FAIR High Content Screening in Bioimaging

scientific article published in 2023

FAIRDOMHub: a repository and collaboration environment for sharing systems biology research

scientific article

Functional Units: Abstractions for Web Service Annotations

Identification of a locus for a form of spondyloepiphyseal dysplasia on chromosome 15q26.1: exclusion of aggrecan as a candidate gene

scientific article published in September 2002

Identification of a locus for a form of spondyloepiphyseal dysplasia on chromosome 15q26.1: exclusion of aggrecan as a candidate gene.

scientific article published in June 2005

Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data

scientific article (publication date: 20 March 2017)

Identifiers for the 21st century: How to design, provision, and reuse persistent identifiers to maximize utility and impact of life science data

scientific article

Introduction to the Special Issue on Digital Natural and Cultural Heritage: Opportunities and Challenges

scientific article published on 19 June 2023

Knowledge Discovery for Biology with Taverna

article

Metadata Management in the Taverna Workflow System

scientific article (publication date: May 2008)

OneStop:JWS Online’s access point to SBML,SBGN and MIRIAM compliant annotation

OneStop:JWS Online’s access point to SBML,SBGN and MIRIAM compliant annotation

Perspectives on automated composition of workflows in the life sciences

scientific article

PhosphaBase: an ontology-driven database resource for protein phosphatases.

scientific article

Populous: a tool for building OWL ontologies from templates

scientific article

Protein classification using ontology classification.

scientific article

RightField: Scientific Knowledge Acquisition by Stealth through Ontology-Enabled Spreadsheets

RightField: Semantic enrichment of Systems Biology data using spreadsheets

RightField: embedding ontology annotation in spreadsheets

scientific article (publication date: 15 July 2011)

Rightfield: Embedding Ontology Term Selection into Spreadsheets for the Annotation of Biological Data

scientific article published in proceedings of the iswc 2010 posters & demonstrations track: collected abstracts

SEEK: a systems biology data and model management platform

scientific article

Semantic Data and Models Sharing in Systems Biology: The Just Enough Results Model and the SEEK Platform

article

Semantic Web, Interoperability

Solutions for data integration in functional genomics: a critical assessment and case study

scientific article

Stealthy annotation of experimental biology by spreadsheets

Structuring research methods and data with the research object model: genomics workflows as a case study

scientific article

Systems Biology in ELIXIR: modelling in the spotlight

scientific article published on 31 May 2024

Taverna: a tool for building and running workflows of services

scientific article

The Data Playground: An Intuitive Workflow Specification Environment

The Evolution of myExperiment

The FAIR Guiding Principles for scientific data management and stewardship

scientific article (publication date: 15 March 2016)

The SEEK: a platform for sharing data and models in systems biology

scientific article

The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud

scientific article

The data playground: An intuitive workflow specification environment

The evolution of standards and data management practices in systems biology

scientific article

Thoughtflow: Standards and Tools for Provenance Capture and Workflow Definition to Support Model-Informed Drug Discovery and Development

scientific article published on 15 May 2017

Toward interoperable bioscience data

scientific article (publication date: 27 January 2012)

Towards a Digital Infrastructure for Illustrated Handwritten Archives

Towards dynamic database infrastructures for mouse genetics

article

Track Introduction: Scientific Workflows

XGAP: a uniform and extensible data model and software platform for genotype and phenotype experiments

scientific article

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