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List of works by Nadir Alvarez

A deep dig––hindsight on Holocene vegetation composition from ancient environmental DNA.

scientific article published in July 2013

A mirage of cryptic species: Genomics uncover striking mitonuclear discordance in the butterfly Thymelicus sylvestris

scientific article published on 18 July 2019

A tale of two forests: ongoing aridification drives population decline and genetic diversity loss at continental scale in Afro-Macaronesian evergreen-forest archipelago endemics

scientific article published on 01 November 2018

An evaluation of new parsimony-based versus parametric inference methods in biogeography: a case study using the globally distributed plant family Sapindaceae

article

Ancient and recent evolutionary history of the bruchid beetle, Acanthoscelides obtectus Say, a cosmopolitan pest of beans

scientific article published in April 2005

Anthropogenic effects on population genetics of phytophagous insects associated with domesticated plants

scientific article

Assessing the phylogenetic usefulness of a previously neglected morphological structure through elliptic Fourier analyses: a case study in Bruchus seed-beetles (Coleoptera: Chrysomelidae: Bruchinae)

scholarly article by GAËL J. KERGOAT published in January 2008

Assessing the potential of RAD-sequencing to resolve phylogenetic relationships within species radiations: The fly genus Chiastocheta (Diptera: Anthomyiidae) as a case study.

scientific article published on 20 June 2017

Asymmetrical nature of the Trollius-Chiastocheta interaction: insights into the evolution of nursery pollination systems

scientific article

Automated Scoring of AFLPs Using RawGeno v 2.0, a Free R CRAN Library ⬇️

scientific article published on January 1, 2012

Bacterial communities within caterpillars are shifted following transition from solitary living to social parasitism of ant colonies

scientific article published on 02 April 2019

Biotic drivers of river and floodplain geomorphology - New molecular methods for assessing present-day and past biota

scientific article published in 2017

Break zones in the distributions of alleles and species in alpine plants

article

Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation

scientific article published on 10 June 2012

Cleaning wrasse species vary with respect to dependency on the mutualism and behavioural adaptations in interactions

article

Climate oscillations and species interactions: large-scale congruence but regional differences in the phylogeographic structures of an alpine plant and its monophagous insect

article

Climatic niche evolution is faster in sympatric than allopatric lineages of the butterfly genus Pyrgus

scientific article

Clustering Genes of Common Evolutionary History

scientific article published on 17 February 2016

Combining conservative and variable markers to infer the evolutionary history of Prunus subgen. Amygdalus s.l. under domestication

Comparative performance of supertree algorithms in large data sets using the soapberry family (Sapindaceae) as a case study

scientific article

Comparative phylogeography in a specific and obligate pollination antagonism

scientific article (publication date: 2011)

Comparative phylogeography of mutualists and the effect of the host on the genetic structure of its partners

Decoupled post-glacial history in mutualistic plant-insect interactions: insights from the yellow loosestrife (Lysimachia vulgaris)and its associated oil-collecting bees (Macropis europaeaandM. fulvipes)

article

Differential phenotypic and genetic expression of defence compounds in a plant-herbivore interaction along elevation

scientific article

DiscoSnp-RAD: de novo detection of small variants for RAD-Seq population genomics

scientific article published on 10 June 2020

DiscoSnp-RAD: de novo detection of small variants for population genomics

Discordances between phylogenetic and morphological patterns in alpine leaf beetles attest to an intricate biogeographic history of lineages in postglacial Europe.

scientific article published on 22 April 2011

Do Sebacinales commonly associate with plant roots as endophytes?

scientific article

Does a shift in host plants trigger speciation in the Alpine leaf beetle Oreina speciosissima (Coleoptera, Chrysomelidae)?

scientific article

Ecological and historical drivers of diversification in the fly genus Chiastocheta Pokorny

scientific article

Ecological distribution and niche segregation of sibling species: the case of bean beetles, Acanthoscelides obtectus Say and A. obvelatus Bridwell

article

Ecological niche overlap in sister species: how do oil-collecting bees Macropis europaea and Macropis fulvipes (Hymenoptera: Melittidae) avoid hybridization and competition?

article

Effects of species traits on the genetic diversity of high-mountain plants: a multi-species study across the Alps and the Carpathians

article

Elevation in tropical sky islands as the common driver in structuring genes and communities of freshwater organisms

scientific article

Evaluating the impact of scoring parameters on the structure of intra-specific genetic variation using RawGeno, an R package for automating AFLP scoring

scientific article

Evidence for mega-landslides as drivers of island colonization

article

Evolutionary history of almond tree domestication in the Mediterranean basin

scientific article published on 27 November 2012

Farmers' practices, metapopulation dynamics, and conservation of agricultural biodiversity on-farm: a case study of sorghum among the Duupa in sub-sahelian Cameroon

article

Fifty years after Ehrlich and Raven, is there support for plant-insect coevolution as a major driver of species diversification?

article

Forecasting changes in population genetic structure of alpine plants in response to global warming

scientific article published on 18 April 2012

Gene duplication, population genomics, and species-level differentiation within a tropical mountain shrub

scientific article

Gene flow among wild and domesticated almond species: insights from chloroplast and nuclear markers

scientific article

Genetic and environmental sources of variation in the autogenous chemical defense of a leaf beetle

scientific article

Genetic consequences of Quaternary climatic oscillations in the Himalayas: Primula tibetica as a case study based on restriction site-associated DNA sequencing

scientific article

Genetic diversity in widespread species is not congruent with species richness in alpine plant communities

scientific article

Genetic structure and evolution of Alpine polyploid complexes: Ranunculus kuepferi (Ranunculaceae) as a case study

scientific article

Genome fingerprinting confirms the species status of the Loosestrifes Lysimachia punctata and L. verticillata (Primulaceae)

Genomic signatures accompanying the dietary shift to phytophagy in polyphagan beetles

scientific article published on 17 May 2019

Genomics of extreme ecological specialists: multiple convergent evolution but no genetic divergence between ecotypes of Maculinea alcon butterflies

scientific article published on 23 October 2017

Global phylogeography of the insect pest Callosobruchus maculatus (Coleoptera: Bruchinae) relates to the history of its main host, Vigna unguiculata

article by Khadim Kébé et al published 1 August 2017 in Journal of Biogeography

High Rate of Protein Coding Sequence Evolution and Species Diversification in the Lycaenids

scientific article published in 2017

History or ecology? Substrate type as a major driver of spatial genetic structure in Alpine plants

scientific article

HyRAD-X, a versatile method combining exome capture and RAD sequencing to extract genomic information from ancient DNA

scientific article published in 2017

Hybridization Capture Using RAD Probes (hyRAD), a New Tool for Performing Genomic Analyses on Collection Specimens

scientific article

Hybridization capture using RAD probes (hyRAD), a new tool for performing genomic analyses on museum collection specimens

Identifying genetic signatures of selection in a non-model species, alpine gentian (Gentiana nivalis L.), using a landscape genetic approach

article

Insights into the biogeographical history of the Lower Guinea Forest Domain: evidence for the role of refugia in the intraspecific differentiation of Aucoumea klaineana

scientific article

Insights into the genetic structure of the cowpea pest Callosobruchus maculatus in Africa

article

Investigating the relationship between pollination strategies and the size-advantage model in zoophilous plants using the reproductive biology of Arum cylindraceum and other European Arum species as case studies

article

Is hybridization driving the evolution of climatic niche in Alyssum montanum.

scientific article published on 14 April 2016

Isolation and characterization of polymorphic microsatellite loci in Acanthoscelides obvelatus Bridwell (Coleoptera: Bruchidae)

scholarly article by Nadir Alvarez published in December 2002

Isolation and characterization of polymorphic microsatellite loci in two primary parasitoids of the noctuid Spodoptera frugiperda: Chelonus insularis and Campoletis sonorensis (Hymenoptera).

scientific article published on 21 October 2008

Isolation and characterization of polymorphic microsatellite markers in Zabrotes subfasciatus Boheman (Coleoptera: Bruchidae)

scholarly article by A. AEBI published in December 2004

Long-term in situ persistence of biodiversity in tropical sky-islands revealed by landscape genomics.

scientific article

Malagasy Dracaena Vand. ex L. (Ruscaceae): an investigation of discrepancies between morphological features and spatial genetic structure at a small evolutionary scale

scientific article

Microsatellite markers in a complex of Horismenus sp. (Hymenoptera: Eulophidae), parasitoids of bruchid beetles

scholarly article by A. AEBI et al published December 2004 in Molecular Ecology Notes

Molecular substitution rate increases in myrmecophilous lycaenid butterflies (Lepidoptera)

article

Morphological, ecological and genetic aspects associated with endemism in the Fly Orchid group

scientific article published on 21 January 2013

Museomics identifies genetic erosion in two butterfly species across the 20th century in Finland

scientific article published on 17 April 2020

Nature, Evolution and Characterisation of Rhizospheric Chemical Exudates Affecting Root Herbivores

Olanzapine as alternative therapy for patients with haloperidol-induced extrapyramidal symptoms: results of a multicenter, collaborative trial in Latin America

scientific article published in August 2001

Origin and expansion of the allotetraploid Aegilops geniculata, a wild relative of wheat

scientific article

Parallels in the evolution of the two largest New and Old World seed-beetle genera (Coleoptera, Bruchidae).

scientific article published in November 2005

Past climate-driven range shifts and population genetic diversity in arctic plants

article

Phylogenetic alpha and beta diversities of butterfly communities correlate with climate in the western Swiss Alps

article

Phylogenetic relationships in the Neotropical bruchid genus Acanthoscelides (Bruchinae, Bruchidae, Coleoptera)

scholarly article by Nadir Alvarez published in February 2006

Phylogenetic relationships in the subfamily Psychodinae (Diptera, Psychodidae)

scientific article published on 18 April 2012

Phylogeny of subtribe Gentianinae (Gentianaceae): Biogeographic inferences despite limitations in temporal calibration points

scientific article published on December 2010

Phylogeographic support for horizontal gene transfer involving sympatric bruchid species

scientific article (publication date: 27 July 2006)

Phylogeography and population genomics of a lotic water beetle across a complex tropical landscape

scientific article published on 16 July 2018

Plastid and nuclear DNA markers reveal intricate relationships at subfamilial and tribal levels in the soapberry family (Sapindaceae).

scientific article

Pollinators as drivers of plant distribution and assemblage into communities

article

Poor performance of DNA barcoding and the impact of RAD loci filtering on the species delimitation of an Iberian ant-eating spider

scientific article published on 24 October 2020

Population genetic structure of two primary parasitoids of Spodoptera frugiperda (Lepidoptera), Chelonus insularis and Campoletis sonorensis (Hymenoptera): to what extent is the host plant important?

scientific article published on 8 April 2010

Predicting present and future intra-specific genetic structure through niche hindcasting across 24 millennia

scientific article

Preserving genetic connectivity in the European Alps protected area network

Proto-South-East Asia as a trigger of early angiosperm diversification

article

Rapid colour shift by reproductive character displacement in Cupido butterflies

scientific article published on 13 October 2020

Reconstructing the origins of high-alpine niches and cushion life form in the genus Androsace S.L. (Primulaceae)

scientific article (publication date: April 2012)

Restriction site-associated DNA sequencing, genotyping error estimation and de novo assembly optimization for population genetic inference.

scientific article published on 3 July 2014

Sibling species of bean bruchids: a morphological and phylogenetic study of Acanthoscelides obtectus Say and Acanthoscelides obvelatus Bridwell

article

Spatial and temporal genetic dynamics of the grasshopper Oedaleus decorus revealed by museum genomics

scientific article published on 29 December 2017

Spatial and temporal heterogeneity in pollinator communities maintains within‐species floral odour variation

scientific article published in 2021

The Altitudinal Niche-Breadth Hypothesis in Insect-Plant Interactions

article

The abrupt climate change at the Eocene-Oligocene boundary and the emergence of South-East Asia triggered the spread of sapindaceous lineages

scientific article (publication date: July 2013)

The origins and spread of domestic horses from the Western Eurasian steppes

The phylogeography of an alpine leaf beetle: divergence within Oreina elongata spans several ice ages

scientific article published on 31 August 2010

The taxonomic impediment: a shortage of taxonomists, not the lack of technical approaches ⬇️

scholarly article published in 2021

The untapped potential of macrofossils in ancient plant DNA research

scientific article published in 2022

Uncovering Cryptic Parasitoid Diversity in Horismenus (Chalcidoidea, Eulophidae)

scientific article

Variation in the proportion of flower visitors of Arum maculatum along its distributional range in relation with community-based climatic niche analyses

scientific article published in 2010

Wheat alleles introgress into selfing wild relatives: empirical estimates from approximate Bayesian computation in Aegilops triuncialis

scientific article

When different contact zones tell different stories: putative ring species in the Megachile concinna species complex (Hymenoptera: Megachilidae)

article

The identity of Argyria lacteella (Fabricius, 1794) (Lepidoptera, Pyraloidea, Crambinae), synonyms, and related species revealed by morphology and DNA capture in type specimens

scientific article published in 2023

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