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List of works by Sabeeha Merchant

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The Chlamydomonas genome reveals the evolution of key animal and plant functions

scientific article
Relationship between nucleosome positioning and DNA methylation

scientific article published on 30 May 2010
The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation

scientific article
Redesigning photosynthesis to sustainably meet global food and bioenergy demand

scientific article published on 29 June 2015
Three acyltransferases and nitrogen-responsive regulator are implicated in nitrogen starvation-induced triacylglycerol accumulation in Chlamydomonas

scientific article
RNA-seq analysis of sulfur-deprived Chlamydomonas cells reveals aspects of acclimation critical for cell survival

scientific article published on 29 June 2010
A regulator of nutritional copper signaling in Chlamydomonas is an SBP domain protein that recognizes the GTAC core of copper response element

scientific article
Nitrogen-Sparing Mechanisms in Chlamydomonas Affect the Transcriptome, the Proteome, and Photosynthetic Metabolism

scientific article published on 18 April 2014
Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.)

scientific article
TAG, You’re it! Chlamydomonas as a reference organism for understanding algal triacylglycerol accumulation

scientific article published on December 29, 2011
Systems biology approach in Chlamydomonas reveals connections between copper nutrition and multiple metabolic steps

scientific article published on 15 April 2011
Between a rock and a hard place: trace element nutrition in Chlamydomonas

scientific article published on 26 April 2006
A revised mineral nutrient supplement increases biomass and growth rate in Chlamydomonas reinhardtii

scientific article
Transcriptome sequencing identifies SPL7-regulated copper acquisition genes FRO4/FRO5 and the copper dependence of iron homeostasis in Arabidopsis

scientific article published on 28 February 2012
Adaptation to Fe-deficiency requires remodeling of the photosynthetic apparatus

scientific article
Arabidopsis CHL27, located in both envelope and thylakoid membranes, is required for the synthesis of protochlorophyllide

scientific article
Systems-level analysis of nitrogen starvation-induced modifications of carbon metabolism in a Chlamydomonas reinhardtii starchless mutant

scientific article published on 26 November 2013
A subset of the diverse COG0523 family of putative metal chaperones is linked to zinc homeostasis in all kingdoms of life

scientific article
Copper-dependent iron assimilation pathway in the model photosynthetic eukaryote Chlamydomonas reinhardtii

scientific article
Reciprocal expression of two candidate di-iron enzymes affecting photosystem I and light-harvesting complex accumulation

scientific article
Novel metabolism in Chlamydomonas through the lens of genomics

scientific article published on 8 February 2007
Transcriptome-wide changes in Chlamydomonas reinhardtii gene expression regulated by carbon dioxide and the CO2-concentrating mechanism regulator CIA5/CCM1.

scientific article
The path to triacylglyceride obesity in the sta6 strain of Chlamydomonas reinhardtii

scientific article
Elemental economy: microbial strategies for optimizing growth in the face of nutrient limitation

scientific article
The GreenCut2 Resource, a Phylogenomically Derived Inventory of Proteins Specific to the Plant Lineage

scientific article published on April 22, 2011
Algae as nutritional and functional food sources: revisiting our understanding

scientific article
Systems and trans-system level analysis identifies conserved iron deficiency responses in the plant lineage

scientific article published on 5 October 2012
The Chlamydomonas genome project: a decade on.

scientific article
High-Resolution Profiling of a Synchronized Diurnal Transcriptome from Chlamydomonas reinhardtii Reveals Continuous Cell and Metabolic Differentiation

scientific article
Pattern of expression and substrate specificity of chloroplast ferredoxins from Chlamydomonas reinhardtii

scientific article published on 07 July 2009
Manganese deficiency in Chlamydomonas results in loss of photosystem II and MnSOD function, sensitivity to peroxides, and secondary phosphorus and iron deficiency

scientific article
FEA1, FEA2, and FRE1, encoding two homologous secreted proteins and a candidate ferrireductase, are expressed coordinately with FOX1 and FTR1 in iron-deficient Chlamydomonas reinhardtii

scientific article
SINGLET OXYGEN RESISTANT 1 links reactive electrophile signaling to singlet oxygen acclimation in Chlamydomonas reinhardtii

scientific article
A homolog of prokaryotic thiol disulfide transporter CcdA is required for the assembly of the cytochrome b6f complex in Arabidopsis chloroplasts

scientific article
The CRR1 nutritional copper sensor in Chlamydomonas contains two distinct metal-responsive domains

scientific article published on 3 December 2010
Xantha-l encodes a membrane subunit of the aerobic Mg-protoporphyrin IX monomethyl ester cyclase involved in chlorophyll biosynthesis

scientific article
Overlapping Specificities of the Mitochondrial Cytochrome c and c1 Heme Lyases

scientific article published on September 26, 2003
PGRL1 participates in iron-induced remodeling of the photosynthetic apparatus and in energy metabolism in Chlamydomonas reinhardtii

scientific article published on 25 September 2009
The ins and outs of algal metal transport

scientific article
Impact of oxidative stress on ascorbate biosynthesis in Chlamydomonas via regulation of the VTC2 gene encoding a GDP-L-galactose phosphorylase

scientific article published on 5 March 2012
Two Chlamydomonas CTR copper transporters with a novel cys-met motif are localized to the plasma membrane and function in copper assimilation

scientific article
Lysosome-related Organelles as Mediators of Metal Homeostasis

scientific article published on August 26, 2014
Retrograde bilin signaling enables Chlamydomonas greening and phototrophic survival

scientific article
Essential histidine and tryptophan residues in CcsA, a system II polytopic cytochrome c biogenesis protein

scientific article published on 9 November 2002
Dissecting the contributions of GC content and codon usage to gene expression in the model alga Chlamydomonas reinhardtii

scientific article published on October 16, 2015
Genetic dissection of nutritional copper signaling in chlamydomonas distinguishes regulatory and target genes

scientific article
Algal Functional Annotation Tool: a web-based analysis suite to functionally interpret large gene lists using integrated annotation and expression data

scientific article
Oxygen deficiency responsive gene expression in Chlamydomonas reinhardtii through a copper-sensing signal transduction pathway

scientific article published in February 2002
POSTTRANSLATIONAL ASSEMBLY OF PHOTOSYNTHETIC METALLOPROTEINS.

scientific article
Copper response regulator1-dependent and -independent responses of the Chlamydomonas reinhardtii transcriptome to dark anoxia

scientific article published on 6 September 2013

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