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List of works by Jonathan Marchini

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A second generation human haplotype map of over 3.1 million SNPs

scientific article
A flexible and accurate genotype imputation method for the next generation of genome-wide association studies

scientific article published in June 2009
Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease

scientific article
Genome-wide detection and characterization of positive selection in human populations

scientific article
Meta-analysis of genome-wide association data and large-scale replication identifies additional susceptibility loci for type 2 diabetes

scientific article
A linear complexity phasing method for thousands of genomes

scientific article published on December 4, 2011
Association scan of 14,500 nonsynonymous SNPs in four diseases identifies autoimmunity variants

scientific article
Common variants near MC4R are associated with fat mass, weight and risk of obesity

scientific article
Improved whole-chromosome phasing for disease and population genetic studies

scientific article published in January 2013
Genome-wide association study of CNVs in 16,000 cases of eight common diseases and 3,000 shared controls

scientific article
Genome-wide strategies for detecting multiple loci that influence complex diseases

scientific article
Genotype Imputation with Thousands of Genomes

scientific article published on November 1, 2011
The effects of human population structure on large genetic association studies

scientific article
A high-resolution HLA and SNP haplotype map for disease association studies in the extended human MHC.

scientific article published on 24 September 2006
Meta-analysis and imputation refines the association of 15q25 with smoking quantity

scientific article
Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression

scientific article published on 26 April 2018
The UK Biobank resource with deep phenotyping and genomic data

scientific article published in Nature
Common variants at five new loci associated with early-onset inflammatory bowel disease

scientific article
Designing genome-wide association studies: sample size, power, imputation, and the choice of genotyping chip

scientific article
Genome-wide association and large-scale follow up identifies 16 new loci influencing lung function.

scientific article
A general approach for haplotype phasing across the full spectrum of relatedness

scientific article
Genome-wide and fine-resolution association analysis of malaria in West Africa

scientific article
The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease

scientific article
A comparison of phasing algorithms for trios and unrelated individuals

scientific article
Novel insights into the genetics of smoking behaviour, lung function, and chronic obstructive pulmonary disease (UK BiLEVE): a genetic association study in UK Biobank

scientific article
Haplotype Estimation Using Sequencing Reads

scientific article published on October 3, 2013
Two-stage two-locus models in genome-wide association

scientific article published in September 2006
HAPGEN2: simulation of multiple disease SNPs

scientific article published on 8 June 2011
Multiple common susceptibility variants near BMP pathway loci GREM1, BMP4, and BMP2 explain part of the missing heritability of colorectal cancer

scientific article
Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel

scientific article
A robust statistical method for case-control association testing with copy number variation

scientific article published on 07 September 2008
Improved imputation of low-frequency and rare variants using the UK10K haplotype reference panel

scientific article
The origin, evolution, and functional impact of short insertion-deletion variants identified in 179 human genomes

scientific article published on 11 March 2013
Effect of five genetic variants associated with lung function on the risk of chronic obstructive lung disease, and their joint effects on lung function

scientific article
The OncoArray Consortium: A Network for Understanding the Genetic Architecture of Common Cancers

scientific article published on 03 October 2016
Genome-wide joint meta-analysis of SNP and SNP-by-smoking interaction identifies novel loci for pulmonary function

scientific article
Genome-wide association studies of brain imaging phenotypes in UK Biobank

scientific article published in Nature
Refining the accuracy of validated target identification through coding variant fine-mapping in type 2 diabetes

scientific article published on 9 April 2018
Haplotype estimation for biobank-scale data sets

scientific article
Genome-wide meta-analysis of 241,258 adults accounting for smoking behaviour identifies novel loci for obesity traits

scientific article
Increased genetic vulnerability to smoking at CHRNA5 in early-onset smokers

scientific article
A new statistical approach to detecting significant activation in functional MRI.

scientific article published in October 2000
A common biological basis of obesity and nicotine addiction

scientific article
A multiple-phenotype imputation method for genetic studies

scientific article published on 22 February 2016
Comparing algorithms for genotype imputation

scientific article published in October 2008
Distinct loci in the CHRNA5/CHRNA3/CHRNB4 gene cluster are associated with onset of regular smoking

scientific article
Tensor decomposition for multiple-tissue gene expression experiments

scientific article published on August 2016
The effect of genome-wide association scan quality control on imputation outcome for common variants

scientific article published on 26 January 2011
RETRACTED ARTICLE: 11,670 whole-genome sequences representative of the Han Chinese population from the CONVERGE project

retracted scholarly article
Multicohort analysis of the maternal age effect on recombination

scientific article

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