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List of works by Aaron McKenna

A comparative assessment of clinical whole exome and transcriptome profiling across sequencing centers: implications for precision cancer medicine

scientific article

A survey of intragenic breakpoints in glioblastoma identifies a distinct subset associated with poor survival

scientific article published on 24 June 2013

Absolute quantification of somatic DNA alterations in human cancer

scientific article

Complementary genomic approaches highlight the PI3K/mTOR pathway as a common vulnerability in osteosarcoma

scientific article

ContEst: estimating cross-contamination of human samples in next-generation sequencing data ⬇️

scientific article published on July 29, 2011

Evolution and impact of subclonal mutations in chronic lymphocytic leukemia

scientific article published on February 2013

Exome and whole-genome sequencing of esophageal adenocarcinoma identifies recurrent driver events and mutational complexity

scientific article published on 24 March 2013

Genetic and clonal dissection of murine small cell lung carcinoma progression by genome sequencing

scientific article

Genomic Characterization of Brain Metastases Reveals Branched Evolution and Potential Therapeutic Targets

scientific article published on 26 September 2015

Genomic Correlate of Exceptional Erlotinib Response in Head and Neck Squamous Cell Carcinoma

scientific article

Genomic analysis of diffuse pediatric low-grade gliomas identifies recurrent oncogenic truncating rearrangements in the transcription factor MYBL1

scientific article published on 30 April 2013

Genomic sequencing of meningiomas identifies oncogenic SMO and AKT1 mutations

scientific article published on 20 January 2013

Integrative and comparative genomic analysis of lung squamous cell carcinomas in East Asian patients

scientific article

Landscape of genomic alterations in cervical carcinomas

scientific article

MAP kinase pathway alterations in BRAF-mutant melanoma patients with acquired resistance to combined RAF/MEK inhibition

scientific article

Medulloblastoma exome sequencing uncovers subtype-specific somatic mutations

scientific article (publication date: 22 July 2012)

Mutational heterogeneity in cancer and the search for new cancer-associated genes

scientific article

Paired exome analysis of Barrett's esophagus and adenocarcinoma

scientific article

Prospective derivation of a living organoid biobank of colorectal cancer patients.

scientific article published on May 2015

Somatic mutation of CDKN1B in small intestine neuroendocrine tumors

scientific article published on 3 November 2013

Systematic genomic and translational efficiency studies of uveal melanoma

scientific article

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

scientific article (publication date: September 2010)

The Somatic Genomic Landscape of Glioblastoma

article

The genetic landscape of clinical resistance to RAF inhibition in metastatic melanoma

scientific article

The genetic landscape of high-risk neuroblastoma

scientific article published on 20 January 2013

The genomic landscape of pediatric Ewing sarcoma

scientific article

The somatic genomic landscape of glioblastoma

scientific article

Whole-exome sequencing and clinical interpretation of formalin-fixed, paraffin-embedded tumor samples to guide precision cancer medicine

scientific article

Whole-exome sequencing identifies a recurrent NAB2-STAT6 fusion in solitary fibrous tumors

scientific article

Widespread genetic heterogeneity in multiple myeloma: implications for targeted therapy

scientific article published in January 2014

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