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List of works by Gordon Saksena

A landscape of driver mutations in melanoma

scientific article

A pan-cancer analysis of transcriptome changes associated with somatic mutations in U2AF1 reveals commonly altered splicing events

scientific article published on 31 January 2014

An APOBEC cytidine deaminase mutagenesis pattern is widespread in human cancers

scientific article published on 14 July 2013

Author Correction: Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples

scientific article published on 30 November 2020

Characterization of the DNA copy-number genome in the blood of cutaneous T-cell lymphoma patients

scientific article published on September 2011

Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients

article

Comprehensive Characterization of Cancer Driver Genes and Mutations

article

Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma

scientific article published on 4 November 2015

Comprehensive Pan-Genomic Characterization of Adrenocortical Carcinoma

article

Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes

Discovery and prioritization of somatic mutations in diffuse large B-cell lymphoma (DLBCL) by whole-exome sequencing

scientific article

Evolution and impact of subclonal mutations in chronic lymphocytic leukemia

scientific article published on February 2013

Exome and whole-genome sequencing of esophageal adenocarcinoma identifies recurrent driver events and mutational complexity

scientific article published on 24 March 2013

Exome sequencing identifies recurrent SPOP, FOXA1 and MED12 mutations in prostate cancer

scientific article

Framework For Quality Assessment Of Whole Genome, Cancer Sequences

Framework for quality assessment of whole genome cancer sequences

scientific article published on 07 October 2020

Gastrointestinal adenocarcinomas of the esophagus, stomach, and colon exhibit distinct patterns of genome instability and oncogenesis

scientific article

Genomic sequencing of colorectal adenocarcinomas identifies a recurrent VTI1A-TCF7L2 fusion

scientific article published on 04 September 2011

Melanoma genome sequencing reveals frequent PREX2 mutations

scientific article

Mutational heterogeneity in cancer and the search for new cancer-associated genes

scientific article

Oncotator: cancer variant annotation tool

scientific article published on 16 March 2015

Pan-cancer patterns of somatic copy number alteration

scientific article published on October 2013

Prognostically relevant gene signatures of high-grade serous ovarian carcinoma

scientific article

Punctuated evolution of prostate cancer genomes

scientific article published on April 2013

RNF43 is frequently mutated in colorectal and endometrial cancers

scientific article

Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples

scientific article published on 21 September 2020

Scalable Open Science Approach for Mutation Calling of Tumor Exomes Using Multiple Genomic Pipelines

Somatic copy number alterations in gastric adenocarcinomas among Asian and Western patients

scientific article

Somatic mutation of CDKN1B in small intestine neuroendocrine tumors

scientific article published on 3 November 2013

The Cancer Genome Atlas Comprehensive Molecular Characterization of Renal Cell Carcinoma

article

The genomic complexity of primary human prostate cancer

scientific article

The mutational landscape of head and neck squamous cell carcinoma

scientific article

Widespread genetic heterogeneity in multiple myeloma: implications for targeted therapy

scientific article published in January 2014

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