List of works by Bram Vrancken

A near-full length genotypic assay for HCV1b.

scientific article published on 22 September 2014

Accounting for population structure reveals ambiguity in the Zaire Ebolavirus reservoir dynamics

scientific article published on 04 March 2020

Accurate quantification of within- and between-host HBV evolutionary rates requires explicit transmission chain modelling.

scientific article published on July 2017

Ancient chicken remains reveal the origins of virulence in Marek’s disease virus

scientific article published on 14 December 2023

Application of Phylodynamic Tools to Inform the Public Health Response to COVID-19: Qualitative Analysis of Expert Opinions

scientific article published on 21 April 2023

Archival influenza virus genomes from Europe reveal genomic variability during the 1918 pandemic

scientific article published on 10 May 2022

COMPARATIVE CIRCULATION DYNAMICS OF THE FIVE MAIN HIV TYPES IN CHINA

scientific article published on 16 September 2020

Comparing patterns and scales of plant virus phylogeography: Rice yellow mottle virus in Madagascar and in continental Africa

scientific article published on 01 July 2019

Contribution of Epidemiological Predictors in Unraveling the Phylogeographic History of HIV-1 Subtype C in Brazil

scientific article

Cross-border spread, lineage displacement and evolutionary rate estimation of rabies virus in Yunnan Province, China

scientific article

Cross-country migration linked to people who inject drugs challenges the long-term impact of national HCV elimination programmes

scientific article published on 01 October 2019

Detection of Natural Resistance-Associated Substitutions by Ion Semiconductor Technology in HCV1b Positive, Direct-Acting Antiviral Agents-Naïve Patients

scientific article published on 27 August 2016

Discovery and genome characterization of three new Jeilongviruses, a lineage of paramyxoviruses characterized by their unique membrane proteins

scientific article published on 16 August 2018

Disentangling the impact of within-host evolution and transmission dynamics on the tempo of HIV-1 evolution

scientific article published on July 2015

Disentangling the role of Africa in the global spread of H5 highly pathogenic avian influenza

scientific article published on 22 November 2019

Distinct Effects of T-705 (Favipiravir) and Ribavirin on Influenza Virus Replication and Viral RNA Synthesis.

scientific article published on 29 August 2016

Divergence dating using mixed effects clock modelling: An application to HIV-1

scientific article published on 01 July 2019

Drivers of HIV-1 transmission: The Portuguese case

scientific article published on 30 September 2019

Epidemiological hypothesis testing using a phylogeographic and phylodynamic framework

scientific article published on 06 November 2020

HIV Rebound Is Predominantly Fueled by Genetically Identical Viral Expansions from Diverse Reservoirs

scientific article published on 27 August 2019

HIV-1 evolution in patients undergoing immunotherapy with Tat, Rev, and Nef expressing dendritic cells followed by treatment interruption

scientific article published on November 2013

Host ecology determines the dispersal patterns of a plant virus

scientific article published on 16 December 2015

Identifying the patterns and drivers of enzootic dynamics using reservoir sampling

scientific article published on 01 January 2019

Implications of hepatitis C virus subtype 1a migration patterns for virus genetic sequencing policies in Italy

scientific article

In Search of Covariates of HIV-1 Subtype B Spread in the United States-A Cautionary Tale of Large-Scale Bayesian Phylogeography

scientific article published on 05 February 2020

In Vivo Therapy with M2e-Specific IgG Selects for an Influenza A Virus Mutant with Delayed Matrix Protein 2 Expression

scientific article published on 13 July 2021

Increasing importance of European lineages in seeding the hepatitis C virus subtype 1a epidemic in Spain

article

Limited evolution of the yellow fever virus 17d in a mouse infection model

scientific article published on 01 January 2019

Measles virus and rinderpest virus divergence dated to the sixth century BCE

scientific article published on 01 June 2020

Molecular detection and genomic characterization of diverse hepaciviruses in African rodents

scientific article published on 09 April 2021

New evidence for the east-west spread of the highly pathogenic avian influenza H5N1 virus between Central Asian and east Asian-Australasian flyways in China.

scientific article

On the importance of negative controls in viral landscape phylogeography

scientific article published on 01 July 2018

Phylogenetic relationships of the HA and NA genes between vaccine and seasonal influenza A(H3N2) strains in Korea

scientific article

Proposal for a new subtype of the zoonotic genotype 3 Hepatitis E virus: HEV-3l

scientific article published on 13 February 2018

Quantifying Next Generation Sequencing Sample Pre-Processing Bias in HIV-1 Complete Genome Sequencing

scientific article published on 7 January 2016

Recent advances in computational phylodynamics

scientific article published on 01 August 2018

Reconstruction of the origin and dispersal of the worldwide dominant Hepatitis B Virus subgenotype D1

scientific article published in 2022

Simultaneously estimating evolutionary history and repeated traits phylogenetic signal: applications to viral and host phenotypic evolution

scientific article

SpreaD3: Interactive Visualization of Spatiotemporal History and Trait Evolutionary Processes.

scientific article

The epidemic dynamics of hepatitis C virus subtypes 4a and 4d in Saudi Arabia

scientific article published on 21 March 2017

The genealogical population dynamics of HIV-1 in a large transmission chain: bridging within and among host evolutionary rates

scientific article (publication date: April 2014)

The multi-faceted dynamics of HIV-1 transmission in Northern Alberta: A combined analysis of virus genetic and public health data

scientific article

Transmission dynamics of re-emerging rabies in domestic dogs of rural China

article

Why comprehensive datasets matter when inferring epidemic links or subgenotyping

scientific article published on 16 August 2018

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