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List of works by Ugur Dogrusoz

Algorithms for effective querying of compound graph-based pathway databases

scientific article

Analyzing causal relationships in proteomic profiles using CausalPath

scientific article published on 24 November 2021

Causal interactions from proteomic profiles: Molecular data meet pathway knowledge

scientific article published on 12 May 2021

CiSE: A Circular Spring Embedder Layout Algorithm ⬇️

scientific article published on June 1, 2013

Efficient methods and readily customizable libraries for managing complexity of large networks.

scientific article published on 29 May 2018

Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal

scientific article

PATIKAmad: putting microarray data into pathway context

scientific article

RSTrace+: Reviewer suggestion using software artifact traceability graphs

scientific article published on 20 October 2020

SyBLaRS: A web service for laying out, rendering and mining biological maps in SBGN, SBML and more

scientific article published in 2022

Systems Biology Graphical Notation: Process Description language Level 1 Version 2.0.

scientific article published on 13 June 2019

Systems biology graphical notation markup language (SBGNML) version 0.3.

scientific article published on 22 June 2020

The BioPAX community standard for pathway data sharing

scientific article (publication date: September 2010)

The cBio cancer genomics portal: an open platform for exploring multidimensional cancer genomics data

scientific article

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