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List of works by Johnjoe McFadden

13C-flux spectral analysis of host-pathogen metabolism reveals a mixed diet for intracellular Mycobacterium tuberculosis

scientific article published on August 2013

A microfluidic system for long-term time-lapse microscopy studies of mycobacteria

scientific article

A quantum mechanical model of adaptive mutation

scientific article published in June 1999

A standardized BioBrick toolbox for the assembly of sequences in mycobacteria

scientific article published on 19 July 2019

AFM imaging of functionalized carbon nanotubes on biological membranes

scientific article published on 2 October 2009

Abdominal lymph-node granulomas and Helicobacter pylori

scientific article published on 01 July 1993

Acorn: a grid computing system for constraint based modeling and visualization of the genome scale metabolic reaction networks via a web interface ⬇️

scientific article

Activity of mycobacterial promoters during intracellular and extracellular growth

scientific article published on 01 August 1995

An overview of human leptospirosis vaccine design and future perspectives

scientific article published on 28 November 2019

Author Correction: Development of a diagnostic compatible BCG vaccine against Bovine tuberculosis

scientific article published on 01 October 2020

Auxotrophic complementation as a selectable marker for stable expression of foreign antigens in Mycobacterium bovis BCG

scientific article published on 20 September 2007

Carbon Nanotubes Loaded with Anticancer Drugs: A Platform for Multimodal Cancer Treatment

Carbon flux rerouting during Mycobacterium tuberculosis growth arrest

scientific article

Carbon flux rerouting during Mycobacterium tuberculosis growth arrest

scholarly article by Lanbo Shi et al published March 2016 in Molecular Microbiology

Cellular localization, accumulation and trafficking of double-walled carbon nanotubes in human prostate cancer cells

Chloroquine-enhanced gene delivery mediated by carbon nanotubes

article

Comparative evaluation of Mycobacterium vaccae as a surrogate cloning host for use in the study of mycobacterial genetics

article

Comparison of human low-molecular-weight RNA from normal and Crohn's disease derived blood and mesenteric, lymph node leucocytes

scientific article published in 1984

Compiling a molecular inventory for Mycobacterium bovis BCG at two growth rates: evidence for growth rate-mediated regulation of ribosome biosynthesis and lipid metabolism

scientific article published on March 2005

Construction and use of integrative vectors to express foreign genes in mycobacteria.

scientific article

Context-sensitive transposition of IS6110 in mycobacteria

scientific article published on 01 November 1999

DNA fingerprinting as an indicator of active transmission of multidrug-resistant tuberculosis in Poland

article

Deletion of the putative antioxidant noxR1 does not alter the virulence of Mycobacterium tuberculosis H37Rv.

scientific article

Design of double-walled carbon nanotubes for biomedical applications

scientific article published on 22 August 2012

Detection of Mycobacterium tuberculosis in clinical samples using insertion sequences IS 6110 and IS990

scientific article published on 01 January 2001

Detection of mycobacterial DNA in sarcoidosis and tuberculosis with polymerase chain reaction

scientific article published on 01 April 1992

Development of a diagnostic compatible BCG vaccine against Bovine tuberculosis

scientific article published on 28 November 2019

Differential producibility analysis (DPA) of transcriptomic data with metabolic networks: deconstructing the metabolic response of M. tuberculosis

scientific article

Drug loading, dispersion stability, and therapeutic efficacy in targeted drug delivery with carbon nanotubes

scholarly article in Carbon, vol. 50 no. 2, February 2012

Escape From Evolutionary Stasis by Transposon-mediated Deleterious Mutations ⬇️

scientific article published on June 21, 1997

Functionalized Carbon Nanotubes for Gene Biodelivery

article

GSMN-ML- a genome scale metabolic network reconstruction of the obligate human pathogen Mycobacterium leprae

scientific article published on 06 July 2020

GSMN-TB: a web-based genome-scale network model of Mycobacterium tuberculosis metabolism

scientific article published on January 2007

Gene replacement by homologous recombination in Mycobacterium bovis BCG

article

Generation of Chemically Unmodified Pure Single-Walled Carbon Nanotubes by Solubilizing with RNA and Treatment with Ribonuclease A

Genetic screening for the protective antigenic targets of BCG vaccination

scientific article published on 01 August 2020

Higher dispersion efficacy of functionalized carbon nanotubes in chemical and biological environments

scientific article published on May 2010

IS900-promoted stable integration of a foreign gene into mycobacteria.

scientific article published in August 1991

IS901, a new member of a widespread class of atypical insertion sequences, is associated with pathogenicity inMycobacterium avium ⬇️

scientific article published on September 1, 1991

IS990, a new species-specific insertion-sequence-related element of the Mycobacterium tuberculosis complex.

scientific article

Identification and characterization of a novel insertion sequence, IS1106, downstream of the porA gene in B15 Neisseria meningitidis.

scientific article published on June 1992

Identification of a UK outbreak strain of Neisseria meningitidis with a DNA probe

scientific article published on 01 May 1990

Identification of proteins from tuberculin purified protein derivative (PPD) by LC-MS/MS

scientific article published on 14 August 2009

Identification of the immunoproteome of the meningococcus by cell surface immunoprecipitation and MS.

scientific article

Immunogenicity of Mycobacterium bovis BCG expressing Anaplasma marginale MSP1a antigen

scientific article published on 02 June 2006

Infection with an avirulent phoP mutant of Neisseria meningitidis confers broad cross-reactive immunity.

scientific article

Insight into proteomic investigations of Neisseria meningitidis serogroup C strain L91543 from analysis of its genome sequence

scientific article published on 6 April 2015

Integrating Kinetic Model of E. coli with Genome Scale Metabolic Fluxes Overcomes Its Open System Problem and Reveals Bistability in Central Metabolism

scientific article published on 15 October 2015

Integrating information in the brain's EM field: the cemi field theory of consciousness

scientific article published on 22 September 2020

Interrogation of global mutagenesis data with a genome scale model of Neisseria meningitidis to assess gene fitness in vitro and in sera

scientific article

Intracellular Mycobacterium leprae Utilizes Host Glucose as a Carbon Source in Schwann Cells

scientific article published on 17 December 2019

Intracellular Mycobacterium tuberculosis Exploits Multiple Host Nitrogen Sources during Growth in Human Macrophages

scientific article published on 01 December 2019

Life is simple : how Occam's razor set science free and shapes the universe

Book in English. McFadden, 2021

Life on the edge : the coming of age of quantum biology

Loss of phenotypic inheritance associated with ydcI mutation leads to increased frequency of small, slow persisters in Escherichia coli

scientific article published on 06 February 2020

MUFINS: multi-formalism interaction network simulator. ⬇️

scientific article

Modeling and simulation of the main metabolism in Escherichia coli and its several single-gene knockout mutants with experimental verification

scientific article published on 19 November 2010

Modeling the binding of peptides on carbon nanotubes and their use as protein and DNA carriers

Mycobacteria and AIDS: epidemiological and genetic markers, virulence factors and interactions with the immune system

article

Mycobacteria and sarcoidosis: Authors' reply.

scientific article published in May 1993

Mycobacterial DNA not detected in liver sections from patients with primary biliary cirrhosis.

scientific article published on March 1998

Mycobacterium bovis BCG as a delivery system for the RAP-1 antigen from Babesia bovis

article

Mycobacterium tuberculosis strains disrupted in mce3 and mce4 operons are attenuated in mice

scientific article

Naturally occurring insertional inactivation of theporAgene ofNeisseria meningitidisby integration of IS1301

scientific article published on 01 October 1998

New Recombinant Mycobacterium bovis BCG Expression Vectors: Improving Genetic Control over Mycobacterial Promoters

scientific article published on 5 February 2016

No evidence for antibodies to mycobacterial A60 antigen in Crohn's disease sera by enzyme-linked immunoabsorbent assay (ELISA)

article

Optimising DNA binding to carbon nanotubes by non-covalent methods

article by Vanesa Sanz et al published April 2011 in Carbon

Origins of AIDS.

scientific article published in March 1991

Phylogenetic and epidemiological analysis of Neisseria meningitidis using DNA probes

scientific article published on October 1992

Physics and the mind: comment on 'Natural world physical-, brain operational-, and mind phenomenal-space-time' by Fingelkurts et al.

scientific article published on 14 April 2010

Polymerase chain reaction for diagnosis of meningococcal meningitis

scientific article published on 01 December 1992

Protamine and chloroquine enhance gene delivery and expression mediated by RNA-wrapped single walled carbon nanotubes.

scientific article published on March 2012

Quantum Biology: An Update and Perspective

scientific article published on 26 January 2021

Rational design of diagnostic and vaccination strategies for tuberculosis

scientific article published in January 2012

Recombinant Mycobacterium bovis BCG expressing the Sm14 antigen of Schistosoma mansoni protects mice from cercarial challenge

scientific article

Reduced toxicity of lipo-oligosaccharide from a phoP mutant of Neisseria meningitidis: an in vitro demonstration

scientific article

Slow protein fluctuations explain the emergence of growth phenotypes and persistence in clonal bacterial populations

scientific article

Specific detection of Mycobacterium paratuberculosis DNA associated with granulomatous tissue in Crohn's disease.

scientific article

Specificity of primers based on IS6110 to Mycobacterium tuberculosis complex DNA

scientific article published on 01 December 1993

Stimulation of transposition of the Mycobacterium tuberculosis insertion sequence IS6110 by exposure to a microaerobic environment

scientific article published on 01 September 1999

Strain variation in Mycobacterium avium: Polymorphism of IS1110-related sequences

scholarly article by Manolo Hernandez Perez et al published April 1997 in International Journal of Infectious Diseases

System-level strategies for studying the metabolism of Mycobacterium tuberculosis.

scientific article published on 11 October 2010

Systems approaches to uncovering in vivo state of the TB bacillus

scientific article published on 17 December 2010

Systems biology of the metabolism ofMycobacterium tuberculosis

scientific article published on 01 October 2010

Systems-based approaches to probing metabolic variation within the Mycobacterium tuberculosis complex

scientific article

The acute-phase reactant C-reactive protein binds to phosphorylcholine-expressing Neisseria meningitidis and increases uptake by human phagocytes

scientific article published on 14 January 2008

The anaplerotic node is essential for the intracellular survival of Mycobacterium tuberculosis.

scientific article published on 23 February 2018

The genetic requirements for fast and slow growth in mycobacteria

scientific article

The magnetic immuno-polymerase chain reaction assay for the detection of Campylobacter in milk and poultry

scientific article published on 01 April 1996

The origins of quantum biology

scientific article published on 12 December 2018

The use of DNA probes identifying restriction-fragment-length polymorphisms to examine the Mycobacterium avium complex

scientific article published on 01 November 1987

The use of polymorphic DNA and protein markers for the third complement component for determining linkage of familial hypercholesterolaemia

scientific article published on 01 September 1984

Towards the immunoproteome of Neisseria meningitidis

scientific article published on 16 June 2009

Trajectory energy minimization for cell growth tracking and genealogy analysis.

scientific article published on 24 May 2017

Transcriptomic analysis identifies growth rate modulation as a component of the adaptation of mycobacteria to survival inside the macrophage.

scientific article published on 23 March 2007

Transposon libraries identify novel Mycobacterium bovis BCG genes involved in the dynamic interactions required for BCG to persist during in vivo passage in cattle

scientific article published on 28 May 2019

Triple functionalisation of single-walled carbon nanotubes with doxorubicin, a monoclonal antibody, and a fluorescent marker for targeted cancer therapy

scholarly article in Carbon, vol. 47 no. 9, August 2009

Updating and curating metabolic pathways of TB.

scientific article published on January 2013

Uptake and Release of Double-Walled Carbon Nanotubes by Mammalian Cells

Uptake, Intracellular Localization and Biodistribution of Carbon Nanotubes

¹³C metabolic flux analysis identifies an unusual route for pyruvate dissimilation in mycobacteria which requires isocitrate lyase and carbon dioxide fixation

scientific article

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