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List of works by John R. Prensner

A FIRE-y PAGE in the computational analysis of cancer profiles

scientific article

A case of metastatic adenocarcinoma of unknown primary in a pediatric patient: Opportunities for precision medicine

scientific article published on 12 December 2020

A novel RNA in situ hybridization assay for the long noncoding RNA SChLAP1 predicts poor clinical outcome after radical prostatectomy in clinically localized prostate cancer

scientific article

Abstract 2795: An onco-protein axis linking polycomb repressive complex 2 and polycomb repressive complex 1 through miRNAs in cancer

Abstract 4707: Discovery and characterization of PCAT-1, a novel lincRNA implicated in prostate cancer tumorigenesis

article

An integrative approach to reveal driver gene fusions from paired-end sequencing data in cancer

scientific article

Analysis of the tau-associated proteome reveals that exchange of Hsp70 for Hsp90 is involved in tau degradation

scientific article

Assessing the significance of chromosomal aberrations in cancer: methodology and application to glioma

scientific article (publication date: 11 December 2007)

Beyond PSA: the next generation of prostate cancer biomarkers

scientific article published on March 2012

Characterization of KRAS rearrangements in metastatic prostate cancer

scientific article published on June 2011

Characterization of TMPRSS2:ETV5 and SLC45A3:ETV5 gene fusions in prostate cancer.

scientific article

Coordinated regulation of polycomb group complexes through microRNAs in cancer.

scientific article

Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer

scientific article

Expressed pseudogenes in the transcriptional landscape of human cancers

scientific article (publication date: 22 June 2012)

Integrative Clinical Sequencing in the Management of Refractory or Relapsed Cancer in Youth

scientific article published on September 2015

KRAS-G12C mutation is associated with poor outcome in surgically resected lung adenocarcinoma.

scientific article published on October 2014

Metabolism unhinged: IDH mutations in cancer.

scientific article

Modulation of long noncoding RNAs by risk SNPs underlying genetic predispositions to prostate cancer.

scientific article published on 15 August 2016

Oncogenic gene fusions in epithelial carcinomas

scientific article

PARP-1 inhibition as a targeted strategy to treat Ewing's sarcoma

scientific article published on 27 January 2012

PCAT-1, a long noncoding RNA, regulates BRCA2 and controls homologous recombination in cancer

scientific article

Precision medicine in pediatric oncology: Lessons learned and next steps

scientific article published on 17 October 2016

RNA biomarkers associated with metastatic progression in prostate cancer: a multi-institutional high-throughput analysis of SChLAP1.

scientific article

Reconstructing targetable pathways in lung cancer by integrating diverse omics data

scientific article

Role of the TMPRSS2-ERG gene fusion in prostate cancer

scientific article

Systematic, evidence-based discovery of biomarkers at the NCI.

scientific article published on 07 August 2012

Targeting the MLL complex in castration-resistant prostate cancer

scientific article

The emergence of lncRNAs in cancer biology

scientific article

The landscape of antisense gene expression in human cancers

scientific article published on 10 June 2015

The landscape of long noncoding RNAs in the human transcriptome

scientific article

The landscape of somatic copy-number alteration across human cancers

scientific article

The lncRNA PCAT29 inhibits oncogenic phenotypes in prostate cancer

scientific article

The lncRNA landscape of breast cancer reveals a role for DSCAM-AS1 in breast cancer progression

scientific article published on 26 September 2016

The long non-coding RNA PCAT-1 promotes prostate cancer cell proliferation through cMyc

scientific article

The long noncoding RNA SChLAP1 promotes aggressive prostate cancer and antagonizes the SWI/SNF complex

scientific article published on 29 September 2013

Transcriptome sequencing across a prostate cancer cohort identifies PCAT-1, an unannotated lincRNA implicated in disease progression

scientific article

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