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List of works by Stéphane Hué

A complex hepatitis B virus (X/C) recombinant is common in Long An county, Guangxi and may have originated in southern China ⬇️

scientific article

A phylotype-based analysis highlights the role of drug-naive HIV-positive individuals in the transmission of antiretroviral resistance in the UK.

scientific article

An active TRIM5 protein in rabbits indicates a common antiviral ancestor for mammalian TRIM5 proteins.

scientific article published on 29 August 2007

Automated analysis of phylogenetic clusters

scientific article

Compensatory mutation partially restores fitness and delays reversion of escape mutation within the immunodominant HLA-B*5703-restricted Gag epitope in chronic human immunodeficiency virus type 1 infection

scientific article

Conformational Adaptation of Asian Macaque TRIMCyp Directs Lineage Specific Antiviral Activity

scientific article

Demonstration of sustained drug-resistant human immunodeficiency virus type 1 lineages circulating among treatment-naïve individuals

scientific article published on 21 January 2009

Evolution of a species-specific determinant within human CRM1 that regulates the post-transcriptional phases of HIV-1 replication

scientific article (publication date: November 2011)

G2/M cell cycle arrest correlates with primate lentiviral Vpr interaction with the SLX4 complex. ⬇️

scientific article published on 15 October 2014

Genetic analysis reveals the complex structure of HIV-1 transmission within defined risk groups

scientific article

HIV Transmission Patterns Among Immigrant Latinos Illuminated by the Integration of Phylogenetic and Migration Data

scientific article

HIV type 1 in a rural coastal town in Kenya shows multiple introductions with many subtypes and much recombination ⬇️

scientific article published on 19 July 2011

HIV-1 Group P is unable to antagonize human tetherin by Vpu, Env or Nef.

scientific article

HIV-1 capsid-cyclophilin interactions determine nuclear import pathway, integration targeting and replication efficiency

scientific article

HIV-1 pol gene variation is sufficient for reconstruction of transmissions in the era of antiretroviral therapy.

scientific article

HIV-1 subtype distribution in the Gambia and the significant presence of CRF49_cpx, a novel circulating recombinant form

scientific article

Hare TRIM5α restricts divergent retroviruses and exhibits significant sequence variation from closely related lagomorpha TRIM5 genes

scientific article

Hepatitis B virus candidate subgenotype I1 varies in distribution throughout Guangxi, China and may have originated in Long An county, Guangxi

scientific article published in May 2013

Hepatitis C virus quasispecies and pseudotype analysis from acute infection to chronicity in HIV-1 co-infected individuals

scientific article published on 10 March 2016

Human Immunodeficiency Virus Type 1 Phylodynamics to Detect and Characterize Active Transmission Clusters in North Carolina

scientific article published on 01 March 2020

Human MX2 is an interferon-induced post-entry inhibitor of HIV-1 infection

scientific article

Human immunodeficiency virus type-1 (HIV-1) continues to evolve in presence of broadly neutralizing antibodies more than ten years after infection

scientific article

Identification of a transmission chain of HIV type 1 containing drug resistance-associated mutations

scientific article published in May 2003

In vivo emergence of HIV-1 highly sensitive to neutralizing antibodies

scientific article

Investigating signs of recent evolution in the pool of proviral HIV type 1 DNA during years of successful HAART.

scientific article published on January 2007

Low risk of a sexually-transmitted Zika virus outbreak

scientific article published on 19 September 2016

Minimal variation in T-20 binding domain of different HIV-1 subtypes from antiretroviral-naive and -experienced patients

scientific article

Mutation of a single residue renders human tetherin resistant to HIV-1 Vpu-mediated depletion

scientific article

New insights into an X-traordinary viral protein

scientific article published in 2014

No evidence of XMRV in prostate cancer cohorts in the Midwestern United States

scientific article

Novel HIV-1 recombinants spreading across multiple risk groups in the United Kingdom: the identification and phylogeography of Circulating Recombinant Form (CRF) 50_A1D

scientific article (publication date: 2014)

Novel subtype C human immunodeficiency virus type 1 envelopes cloned directly from plasma: coreceptor usage and neutralization phenotypes

scientific article published on 19 May 2010

Number of HIV-1 founder variants is determined by the recency of the source partner infection

scientific article published on 01 July 2020

Phenotypic characterization of virological failure following lopinavir/ritonavir monotherapy using full-length Gag-protease genes

scientific article published on 4 August 2014

Phylodynamic and phylogeographic patterns of the HIV type 1 subtype F1 parenteral epidemic in Romania

scientific article

Phylogenetic analyses reveal HIV-1 infections between men misclassified as heterosexual transmissions

scientific article

Phylogenetic analysis of murine leukemia virus sequences from longitudinally sampled chronic fatigue syndrome patients suggests PCR contamination rather than viral evolution.

scientific article

Phylogenetic and demographic characterization of HIV-1 transmission in Madrid, Spain

scientific article published on 2 January 2013

Phylogenetic insights into regional HIV transmission

scientific article published on September 2012

Population dynamics of HIV-2 in rural West Africa: comparison with HIV-1 and ongoing transmission at the heart of the epidemic

scientific article

Positive Selection Analysis of Overlapping Reading Frames Is Invalid

scientific article published on 30 June 2015

Potent autologous and heterologous neutralizing antibody responses occur in HIV-2 infection across a broad range of infection outcomes

scientific article published on 9 November 2011

Poxvirus genomes: a phylogenetic analysis

scientific article

Preservation of tetherin and CD4 counter-activities in circulating Vpu alleles despite extensive sequence variation within HIV-1 infected individuals

scientific article published on 23 January 2014

Restriction of V3 region sequence divergence in the HIV-1 envelope gene during antiretroviral treatment in a cohort of recent seroconverters

scientific article published on 18 January 2013

Sexual transmission of single human immunodeficiency virus type 1 virions encoding highly polymorphic multisite cytotoxic T-lymphocyte escape variants

scientific article

Single Genome Analysis for the Detection of Linked Multiclass Drug Resistance Mutations in HIV-1-Infected Children After Failure of Protease Inhibitor-Based First-Line Therapy

scientific article

Synonymous genetic polymorphisms within Brazilian human immunodeficiency virus Type 1 subtypes may influence mutational routes to drug resistance

scientific article published on 12 March 2004

The calibrated population resistance tool: standardized genotypic estimation of transmitted HIV-1 drug resistance

scientific article published on 20 March 2009

Transmission of Non-B HIV Subtypes in the United Kingdom Is Increasingly Driven by Large Non-Heterosexual Transmission Clusters

scientific article published on 23 December 2015

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