List of works - Pardis C. Sabeti - Paulina

List of works by Pardis C. Sabeti

Pardis Sabeti: How we'll fight the next deadly virus

TEDWomen 2015

Adaptation of the multiplexed CRISPR-Cas13 CARMEN RVP assay for longitudinal detection of respiratory pathogens from air samples

Analyzing the Impact of a Real-life Outbreak Simulator on Pandemic Mitigation: an Epidemiological Modeling Study

Antigen test swabs are comparable to nasopharyngeal swabs for sequencing of SARS-CoV-2

DNA spike-ins enable confident interpretation of SARS-CoV-2 genomic data from amplicon-based sequencing

Delphy: scalable, near-real-time Bayesian phylogenetics for outbreaks

Establishing methods to monitor H5N1 influenza virus in dairy cattle milk

Genome-wide functional screen of 3’UTR variants uncovers causal variants for human disease and evolution

HCR-FlowFISH: A flexible CRISPR screening method to identify cis-regulatory elements and their target genes

In vivo single-cell profiling of lncRNAs during Ebola virus infection

JUNIPER: Reconstructing Transmission Events from Next-Generation Sequencing Data at Scale

Machine-guided design of synthetic cell type-specificcis-regulatory elements

Multi-center integrated analysis of non-coding CRISPR screens

Rapid development and field evaluation of a portable CRISPR-based assay for Mpox during the 2025 Sierra Leone outbreak

Single-cell profiling of Ebola virus infectionin vivoreveals viral and host transcriptional dynamics

The Case for Altruism in Institutional Diagnostic Testing

Transmission Waiting Time: A Unifying Metric for Outbreak Controllability