List of works by Daniel G. Peterson

A draft physical map of a D-genome cotton species (Gossypium raimondii)

scientific article

A genomic resource for the sedentary semi-endoparasitic reniform nematode, Rotylenchulus reniformis Linford & Oliveira

scientific article published on 01 January 2019

Adventures in the enormous: a 1.8 million clone BAC library for the 21.7 Gb genome of loblolly pine

scientific article

An automated, high-throughput sequence read classification pipeline for preliminary genome characterization.

scientific article published on 10 August 2007

CattleTickBase: an integrated Internet-based bioinformatics resource for Rhipicephalus (Boophilus) microplus

scientific article published in December 2011

Characterization of the genome of bald cypress

scientific article (publication date: 11 November 2011)

Comparative genome analyses reveal distinct structure in the saltwater crocodile MHC.

scientific article

Comparative genome analysis of monocots and dicots, toward characterization of angiosperm diversity

scientific article published on April 2004

Comparative genome-wide analysis reveals that Burkholderia contaminans MS14 possesses multiple antimicrobial biosynthesis genes but not major genetic loci required for pathogenesis.

scientific article

Comparative genomics of an unusual biogeographic disjunction in the cotton tribe (Gossypieae) yields insights into genome downsizing

scientific article published on 27 November 2017

Computational prediction of disease microRNAs in domestic animals

scientific article

CotQuest: improved algorithm and software for nonlinear regression analysis of DNA reassociation kinetics data

scientific article

De Novo Genome Sequence Assemblies of Gossypium raimondii and Gossypium turneri

scientific article published on 07 October 2019

Diversity and abundance of the abnormal chromosome 10 meiotic drive complex in Zea mays

scientific article published on 27 February 2013

ERAIZDA: a model for holistic annotation of animal infectious and zoonotic diseases

scientific article

Empirical comparison of ab initio repeat finding programs

scientific article

Epigenomics and bolting tolerance in sugar beet genotypes

scientific article

Erratum to: Bacterial Diversity Patterns Differ in Soils Developing in Sub-tropical and Cool-Temperate Ecosystems

scientific article published on 12 December 2016

Evolution of genome size and complexity in Pinus

scientific article (publication date: 2009)

Exploring the loblolly pine (Pinus taeda L.) genome by BAC sequencing and Cot analysis.

scientific article published on 12 April 2018

Extensive and biased intergenomic nonreciprocal DNA exchanges shaped a nascent polyploid genome, Gossypium (cotton)

scientific article

Fine mapping and identification of candidate genes for a QTL affecting Meloidogyne incognita reproduction in Upland cotton

scientific article

Five life stage-specific transcriptome assemblies for the reniform nematode, Rotylenchulus reniformis Linford & Oliveira

scientific article published on 01 January 2018

Gene disruption by structural mutations drives selection in US rice breeding over the last century

scientific article published on 18 March 2021

Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement

scientific article published on 20 April 2020

Independent Domestication of Two Old World Cotton Species

scientific article published on 11 June 2016

Independent and complementary methods for large-scale structural analysis of mammalian chromatin

scientific article published in June 2007

Insight into the Salivary Gland Transcriptome of Lygus lineolaris (Palisot de Beauvois)

scientific article published on 20 January 2016

Insights into the Evolution of the New World Diploid Cottons (Gossypium, Subgenus Houzingenia) Based on Genome Sequencing

scientific article published on 01 January 2019

Integration of Cot analysis, DNA cloning, and high-throughput sequencing facilitates genome characterization and gene discovery

scientific article

Little evidence for homoeologous gene conversion and homoeologous exchange events in <i>Gossypium</i> allopolyploids

Molecular evolution in immune genes across the avian tree of life

scientific article published on 24 June 2019

Quack: A quality assurance tool for high throughput sequence data

scientific article published on 31 January 2018

Reassociation kinetics-based approach for partial genome sequencing of the cattle tick, Rhipicephalus (Boophilus) microplus

scientific article

Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres.

scientific article published in December 2012

Seasonal variation in equine follicular fluid proteome

scientific article published on 06 March 2019

Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes

scientific article

Structure and evolution of cereal genomes

scientific article published on December 2003

Sub genome anchored physical frameworks of the allotetraploid Upland cotton (Gossypium hirsutum L.) genome, and an approach toward reference-grade assemblies of polyploids.

scientific article

The Sorghum bicolor genome and the diversification of grasses

scientific article

The complexity of Rhipicephalus (Boophilus) microplus genome characterised through detailed analysis of two BAC clones

scientific article

The efficacy of Cot-based gene enrichment in wheat (Triticum aestivum L.)

scientific article

The genome of the cotton bacterial blight pathogen Xanthomonas citri pv. malvacearum strain MSCT1.

scientific article

Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs

scientific article

Toward integration of comparative genetic, physical, diversity, and cytomolecular maps for grasses and grains, using the sorghum genome as a foundation

scientific article published in March 2001

Towards decoding the conifer giga-genome

scientific article published on 09 September 2012

Transcriptome-based differentiation of closely-related Miscanthus lines

scientific article

Transcriptomic changes in Echinochloa colona in response to treatment with the herbicide imazamox.

scientific article published on 11 October 2017

Transcriptomic dissection of the rice-Burkholderia glumae interaction.

scientific article

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