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List of works by Romain A Studer

Absence of Selection for Quantum Coherence in the Fenna-Matthews-Olson Complex: A Combined Evolutionary and Excitonic Study

scientific article published on 30 August 2017

Adaptive divergence of ancient gene duplicates in the avian MHC class II beta.

scientific article published on 12 May 2010

CATH: comprehensive structural and functional annotations for genome sequences.

scientific article

Collembolan Transcriptomes Highlight Molecular Evolution of Hexapods and Provide Clues on the Adaptation to Terrestrial Life

scientific article

Epithelial sodium transport and its control by aldosterone: the story of our internal environment revisited

scientific article

Evidence for an episodic model of protein sequence evolution

scientific article published on August 2009

Evolution of protein phosphorylation across 18 fungal species.

scientific article published in October 2016

Evolution of the epithelial sodium channel and the sodium pump as limiting factors of aldosterone action on sodium transport

scientific article published on 10 May 2011

Evolutionary diversification of retinoic acid receptor ligand-binding pocket structure by molecular tinkering

scientific article

Gene3D: Multi-domain annotations for protein sequence and comparative genome analysis

scientific article

How confident can we be that orthologs are similar, but paralogs differ?

scientific article

Large-Scale Analyses of Positive Selection Using Codon Models

Large-scale analysis of orthologs and paralogs under covarion-like and constant-but-different models of amino acid evolution

scientific article

New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures

scientific article

Origin of the response to adrenal and sex steroids: Roles of promiscuity and co-evolution of enzymes and steroid receptors

scientific article

Pervasive positive selection on duplicated and nonduplicated vertebrate protein coding genes

scientific article published on 18 June 2008

Positive selection during the evolution of the blood coagulation factors in the context of their disease-causing mutations

scientific article

Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes

scientific article

Resolving the Ortholog Conjecture: Orthologs Tend to Be Weakly, but Significantly, More Similar in Function than Paralogs ⬇️

scientific article published on May 17, 2012

Selective deployment of transcription factor paralogs with submaximal strength facilitates gene regulation in the immune system

scientific article published on 26 August 2019

Selectome update: quality control and computational improvements to a database of positive selection

scientific article

Selectome: a database of positive selection

scientific article published on 28 October 2008

Stability-activity tradeoffs constrain the adaptive evolution of RubisCO.

scientific article published on 27 January 2014

Structural and evolutionary innovation of the heterodimerization interface between USP and the ecdysone receptor ECR in insects.

scientific article

Understanding the functional difference between growth arrest-specific protein 6 and protein S: an evolutionary approach

scientific article published on October 2014

Vitellogenin underwent subfunctionalization to acquire caste and behavioral specific expression in the harvester ant Pogonomyrmex barbatus

scientific article

What can Comparative Genomics Reveal about the Mechanisms of Protein Function Evolution?

iProteinDB: An Integrative Database of Post-translational Modifications

scientific article published on 09 January 2019

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