List of works by Florian Maumus

A call for benchmarking transposable element annotation methods

scientific article published on 4 August 2015

A new approach for annotation of transposable elements using small RNA mapping

scientific article published on 26 March 2015

Ancestral repeats have shaped epigenome and genome composition for millions of years in Arabidopsis thaliana

scientific article

Comprehensive repeatome annotation reveals strong potential impact of repetitive elements on tomato ripening

scientific article

De Novo Assembly of a New Solanum pennellii Accession Using Nanopore Sequencing.

scientific article published on 12 October 2017

Deep investigation of Arabidopsis thaliana junk DNA reveals a continuum between repetitive elements and genomic dark matter

scientific article published in 2014

Endogenous florendoviruses are major components of plant genomes and hallmarks of virus evolution

scientific article

Erratum to: Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species

scientific article published on 4 April 2017

Erratum to: Understanding Brassicaceae evolution through ancestral genome reconstruction. ⬇️

scientific article published on 4 April 2016

Evolutionary genomics of the cold-adapted diatom Fragilariopsis cylindrus.

scientific article published on 16 January 2017

Finding a partner in the ocean: molecular and evolutionary bases of the response to sexual cues in a planktonic diatom.

scientific article published on 21 April 2017

Gene silencing in the marine diatom Phaeodactylum tricornutum

scientific article (publication date: 31 May 2009)

Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation.

scientific article published on 2 February 2015

Giant viruses at the core of microscopic wars with global impacts

scientific article published on 15 April 2016

Global discovery and characterization of small non-coding RNAs in marine microalgae

scientific article

Haslea ostrearia-like Diatoms

scientific article published in 2014

Highly dynamic exon shuffling in candidate pathogen receptors ... what if brown algae were capable of adaptive immunity?

scientific article published on 5 December 2011

Impact and insights from ancient repetitive elements in plant genomes

scientific article published on 09 February 2016

Insights into the role of DNA methylation in diatoms by genome-wide profiling in Phaeodactylum tricornutum

scientific article published in January 2013

Large-scale survey reveals pervasiveness and potential function of endogenous geminiviral sequences in plants

scientific article published on 01 July 2020

Pan genome of the phytoplankton Emiliania underpins its global distribution.

scientific article

Plant genomes enclose footprints of past infections by giant virus relatives

scientific article

Potential impact of stress activated retrotransposons on genome evolution in a marine diatom

scientific article

Provirophages in the Bigelowiella genome bear testimony to past encounters with giant viruses

scientific article

Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species

scientific article published on 13 February 2017

Redistribution of CHH Methylation and Small Interfering RNAs across the Genome of Tomato ddm1 Mutants

scientific article published on 06 June 2018

The Capsella rubella genome and the genomic consequences of rapid mating system evolution

scientific article

The Ectocarpus Genome and Brown Algal Genomics

article published in 2012

The Ectocarpus genome and the independent evolution of multicellularity in brown algae

scientific article

The Gypsy Database (GyDB) of mobile genetic elements: release 2.0

scientific article

The Phaeodactylum genome reveals the evolutionary history of diatom genomes

scientific article

The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea.

scientific article published on 27 January 2016

The genome of the stress-tolerant wild tomato species Solanum pennellii.

scientific article published on 27 July 2014

Transcription factor families inferred from genome sequences of photosynthetic stramenopiles

scientific article published on 14 July 2010

Understanding Brassicaceae evolution through ancestral genome reconstruction.

scientific article published on 10 December 2015

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