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List of works by Andrey Ptitsyn

A comprehensive approach to clustering of expressed human gene sequence: the sequence tag alignment and consensus knowledge base.

scientific article

A genetic algorithm for designing gene family-specific oligonucleotide sets used for hybridization: the G protein-coupled receptor protein superfamily

scientific article

A new PCR-primer for specific amplification of human DNA fragments selected on the basis of computer analysis of the nucleotide sequences of MER1 dispersed repeats in man

scientific article published in February 1997

A systems biology approach to identify molecular pathways altered by HDAC inhibition in osteosarcoma

scientific article

Analysis of circadian pattern reveals tissue-specific alternative transcription in leptin signaling pathway

scientific article

Application of an RNA amplification method for reliable single-cell transcriptome analysis.

scientific article published on January 2014

Biological aging alters circadian mechanisms in murine adipose tissue depots

scientific article published on 13 March 2012

CLU: a new algorithm for EST clustering

scientific article published on 15 July 2005

Characterization of Peripheral Circadian Clocks in Adipose Tissues

scientific article published on 01 April 2006

Circadian clocks are resounding in peripheral tissues

scientific article

Circadian expression of genes regulating food intake

scientific article published in March 2007

Circadian oscillation of gene expression in murine calvarial bone.

scientific article published on March 2007

Circadian rhythm of osteocalcin in the maxillomandibular complex.

scientific article

Circadian rhythms in adipose tissue: an update

scientific article

Circadian succession of molecular processes in living tissues

scientific article published on 13 February 2018

Class discovery analysis of the lung cancer gene expression data

scientific article

Comprehensive analysis of circadian periodic pattern in plant transcriptome

scientific article

Computational analysis of gene expression space associated with metastatic cancer

scientific article

Computational workflow for analysis of gain and loss of genes in distantly related genomes ⬇️

scientific article published on September 11, 2012

Confidence in Phase Definition for Periodicity in Genes Expression Time Series

scientific article published on 10 July 2015

Data bank homology search algorithm with linear computation complexity

scientific article

Delta sleep-inducing peptide and glucocorticoid-induced leucine zipper: potential links between circadian mechanisms and obesity?

scientific article

Digital signal processing reveals circadian baseline oscillation in majority of mammalian genes

scientific article

Eukaryotic genes in Mycobacterium tuberculosis could have a role in pathogenesis and immunomodulation

scientific article published in January 2002

Expression profiling in canine osteosarcoma: identification of biomarkers and pathways associated with outcome

scientific article

Maternal and fetal response to fetal persistent infection with bovine viral diarrhea virus

scientific article published on 29 July 2010

Nanomaterial-mediated Biosensors for Monitoring Glucose

scientific article

Object-oriented data handler for sequence analysis software development.

scientific article published on December 1995

Permutation test for periodicity in short time series data

scientific article

Permutation test for periodicity in short time series data

Proceedings of the Third Annual Conference of the MidSouth Computational Biology and Bioinformatics Society. Introduction

scientific article

Prospective influences of circadian clocks in adipose tissue and metabolism.

scientific article published on 21 December 2010

Proteome of human subcutaneous adipose tissue stromal vascular fraction cells versus mature adipocytes based on DIGE.

scientific article

Resveratrol suppresses human colon cancer cell proliferation and induces apoptosis via targeting the pentose phosphate and the talin-FAK signaling pathways-A proteomic approach.

scientific article

Rhythms and synchronization patterns in gene expression in the Aedes aegypti mosquito

scientific article

Semantic Assembly and Annotation of Draft RNAseq Transcripts without a Reference Genome

scientific article published on 22 September 2015

Small RNA profiling of Dengue virus-mosquito interactions implicates the PIWI RNA pathway in anti-viral defense

scientific article

Stochastic resonance reveals "pilot light" expression in mammalian genes

scientific article

Systems biology approach to identification of biomarkers for metastatic progression in cancer

scientific article

The ctenophore genome and the evolutionary origins of neural systems

scientific article

The isolation and analysis of the highly repetitive DNA from the argali

scientific article published in September 1998

The role of alternative Polyadenylation in regulation of rhythmic gene expression.

scientific article published on 04 August 2017

Transformation of metabolism with age and lifestyle in Antarctic seals: a case study of systems biology approach to cross-species microarray experiment

scientific article

True or false: all genes are rhythmic

scientific article published on 08 December 2010

Unravelling the mysterious roles of melanocortin-3 receptors in metabolic homeostasis and obesity using mouse genetics

scientific article published on 8 July 2014

Unsupervised clustering of gene expression data points at hypoxia as possible trigger for metabolic syndrome

scientific article

Yield and characterization of subcutaneous human adipose-derived stem cells by flow cytometric and adipogenic mRNA analyzes

scientific article

[Computer system "AutoGene" for automatic analysis of nucleotide sequences]

scientific article published on 01 March 1996

[Gene Nc73EF of Drosophila melanogaster encodes a protein highly homologous to E1 subunit of human 2-oxoglutarate dehydrogenase]

scientific article published on 01 January 1998

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