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List of works by Changbong Hyeon

A structural perspective on the dynamics of kinesin motors

scientific article published in December 2011

A unified framework for inferring the multi-scale organization of chromatin domains from Hi-C

scientific article published on 16 March 2021

Can energy landscape roughness of proteins and RNA be measured by using mechanical unfolding experiments?

scientific article published on 21 August 2003

Capturing the essence of folding and functions of biomolecules using coarse-grained models

scientific article published on 27 September 2011

Chain length determines the folding rates of RNA.

scientific article published on 7 February 2012

Chain organization of human interphase chromosome determines the spatiotemporal dynamics of chromatin loci

scientific article published on 03 December 2018

Charge density of divalent metal cations determines RNA stability

scientific article published on 13 February 2007

Communication over the network of binary switches regulates the activation of A2A adenosine receptor ⬇️

scientific article (publication date: February 2015)

Compaction and tensile forces determine the accuracy of folding landscape parameters from single molecule pulling experiments

scientific article published in Physical Review Letters

Compressing Θ-Chain in Slit Geometry

scientific article published on 05 July 2019

Confinement-Induced Glassy Dynamics in a Model for Chromosome Organization

scientific article published in Physical Review Letters

Correction

Correction to "Energetic Costs, Precision, and Transport Efficiency of Molecular Motors"

scientific article published on 11 June 2019

Correction to "Real-Time Observation of Multiple-Protein Complex Formation with Single-Molecule FRET".

scientific article published on 16 October 2013

Deciphering Kinetic Information from Single-Molecule FRET Data That Show Slow Transitions

scientific article

Decoding Single Molecule Time Traces with Dynamic Disorder ⬇️

scientific article

Destabilization of i-motif by submolar concentrations of a monovalent cation

scientific article published on 29 April 2014

Development and Applications of Coarse-Grained Models for RNA

article

Directly measuring single-molecule heterogeneity using force spectroscopy

scientific article published on 17 June 2016

Dynamic Ca2+-dependent stimulation of vesicle fusion by membrane-anchored synaptotagmin 1

scientific article

Dynamic coordination of two-metal-ions orchestrates λ-exonuclease catalysis

scientific article published in Nature Communications

Dynamical Transition and Heterogeneous Hydration Dynamics in RNA

article

Dynamics of allosteric transitions in GroEL.

scientific article

Effects of Macromolecular Crowding on the Collapse of Biopolymers ⬇️

scientific article published in Physical Review Letters

Effects of trimethylamine N-oxide (TMAO) and crowding agents on the stability of RNA hairpins.

scientific article

Efficient functional delivery of siRNA using mesoporous silica nanoparticles with ultralarge pores.

scientific article published on 27 March 2012

Energetic Costs, Precision, and Transport Efficiency of Molecular Motors

scientific article published on 12 January 2018

Evidence of disorder in biological molecules from single molecule pulling experiments ⬇️

scientific article published on 31 March 2014

Extracting multi-way chromatin contacts from Hi-C data

scientific article published on 06 December 2021

Extracting stacking interaction parameters for RNA from the data set of native structures

scientific article

Force-dependent hopping rates of RNA hairpins can be estimated from accurate measurement of the folding landscapes

scholarly article

Forced-unfolding and force-quench refolding of RNA hairpins

scientific article

From octopus to dendrite-Semiflexible polyelectrolyte brush condensates in trivalent counterion solution

scientific article published on 01 October 2018

Generalized iterative annealing model for the action of RNA chaperones

scientific article published in September 2013

Hidden complexity in the isomerization dynamics of Holliday junctions

scientific article published on 7 October 2012

Implications for human odor sensing revealed from the statistics of odorant-receptor interactions.

scientific article

Internal strain regulates the nucleotide binding site of the kinesin leading head

scholarly article

Interphase human chromosome exhibits out of equilibrium glassy dynamics

scientific article published in Nature Communications

Iterative annealing mechanism explains the functions of the GroEL and RNA chaperones

scientific article published on 23 December 2019

Kinesin's backsteps under mechanical load

scientific article published on 18 May 2009

Kinetic Model for the Activation of Mammalian Olfactory Receptor.

scientific article published on 24 January 2017

Kinetics of Loop Formation in Polymer Chains†

scientific article published on 13 February 2008

Kinetics of interior loop formation in semiflexible chains

scientific article published in March 2006

Ligand-induced global transitions in the catalytic domain of protein kinase A.

scientific article

Link between allosteric signal transduction and functional dynamics in a multisubunit enzyme: S-adenosylhomocysteine hydrolase.

scientific article published on 15 November 2011

Mapping the intramolecular signal transduction of G-protein coupled receptors

scientific article published on 22 November 2013

Measuring the energy landscape roughness and the transition state location of biomolecules using single molecule mechanical unfolding experiments

article by Changbong Hyeon & D Thirumalai published 27 February 2007 in Journal of Physics: Condensed Matter

Mechanical control of the directional stepping dynamics of the kinesin motor

scholarly article

Mechanical unfolding of RNA hairpins

scientific article

Mechanical unfolding of RNA: from hairpins to structures with internal multiloops

scientific article

Mechanical unzipping and rezipping of a single SNARE complex reveals hysteresis as a force-generating mechanism

scientific article

Metal ion dependence of cooperative collapse transitions in RNA

scientific article published on 25 August 2009

Minimal models for proteins and RNA from folding to function

scientific article published on January 2008

Molecular chaperones maximize the native state yield on biological times by driving substrates out of equilibrium

scientific article published on 7 December 2017

Multiple Probes are Required to Explore and Control the Rugged Energy Landscape of RNA Hairpins

scientific article published in 2008

Multiple barriers in forced rupture of protein complexes

scientific article

Oligomer Formation Propensities of Dimeric Bundle Peptides Correlate with Cell Penetration Abilities

scientific article published on 10 July 2018

Pathways and kinetic barriers in mechanical unfolding and refolding of RNA and proteins

scientific article published in November 2006

Persistence Length Changes Dramatically as RNA Folds

scientific article published in Physical Review Letters

Programmed folding of DNA origami structures through single-molecule force control

scientific article published in Nature Communications

Quantifying the Heat Dissipation from a Molecular Motor's Transport Properties in Nonequilibrium Steady States

scientific article

RNA and protein folding: common themes and variations

scientific article

RNA under tension: Folding Landscapes, Kinetic partitioning Mechanism, and Molecular Tensegrity

scientific article published on November 2012

Real-time observation of multiple-protein complex formation with single-molecule FRET

scientific article published on 09 July 2013

Real-time single-molecule co-immunoprecipitation analyses reveal cancer-specific Ras signalling dynamics.

scientific article published on January 2013

Refolding dynamics of stretched biopolymers upon force quench.

scientific article

Revealing the bifurcation in the unfolding pathways of GFP by using single-molecule experiments and simulations

scholarly article

Ripping RNA by Force Using Gaussian Network Models

scientific article published on 2 December 2016

Sequence-dependent folding landscapes of adenine riboswitch aptamers

scientific article published on 23 December 2013

Size, shape, and flexibility of RNA structures

scientific article published in November 2006

Spring-loaded unraveling of a single SNARE complex by NSF in one round of ATP turnover

scientific article

Symmetry, Rigidity, and Allosteric Signaling: From Monomeric Proteins to Molecular Machines

scientific article published on 24 April 2019

The origin of minus-end directionality and mechanochemistry of Ncd motors

scientific article (publication date: 2012)

Theoretical perspectives on protein folding

scientific article published on January 2010

Thermodynamic Cost, Speed, Fluctuations, and Error Reduction of Biological Copy Machines

scientific article published on 07 April 2020

Time-evolving genetic networks reveal a NAC troika that negatively regulates leaf senescence in Arabidopsis.

scientific article

Ultrasensitivity of Water Exchange Kinetics to the Size of Metal Ion.

scientific article published on 30 August 2017

Unexpected Swelling of Stiff DNA in a Polydisperse Crowded Environment

scientific article published on 19 August 2015

Urea destabilizes RNA by forming stacking interactions and multiple hydrogen bonds with nucleic acid bases

scientific article published on December 2009

Urea-induced denaturation of preQ1-riboswitch

scientific article published on 31 July 2013

Water-mediated biomolecular dynamics and allostery

scientific article published on 01 June 2020

Weak temporal signals can synchronize and accelerate the transition dynamics of biopolymers under tension

scientific article

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