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List of works by Jens Allmer

2DB: a Proteomics database for storage, analysis, presentation, and retrieval of information from mass spectrometric experiments

scientific article

A new approach that allows identification of intron-split peptides from mass spectrometric data in genomic databases

scientific article

Algorithms for thede novosequencing of peptides from tandem mass spectra ⬇️

scientific article published on October 1, 2011

Can MiRBase provide positive data for machine learning for the detection of MiRNA hairpins?

scientific article

Comparative quantitative proteomics to investigate the remodeling of bioenergetic pathways under iron deficiency in Chlamydomonas reinhardtii

scientific article published on 01 November 2007

Computational and bioinformatics methods for microRNA gene prediction.

scientific article published in January 2014

Computational methods for ab initio detection of microRNAs

scientific article published on 10 October 2012

Computational prediction of microRNAs from Toxoplasma gondii potentially regulating the hosts' gene expression

scientific article published on 28 October 2014

EPO Mediates Neurotrophic, Neuroprotective, Anti-Oxidant, and Anti-Apoptotic Effects via Downregulation of miR-451 and miR-885-5p in SH-SY5Y Neuron-Like Cells

scientific article published on 30 September 2014

Existing bioinformatics tools for the quantitation of post-translational modifications

scientific article published on 15 May 2010

Feature Selection Has a Large Impact on One-Class Classification Accuracy for MicroRNAs in Plants

scientific article published on 12 April 2016

Genomic Simple Sequence Repeat Markers Reveal Patterns of Genetic Relatedness and Diversity in Sesame

article

Intersection of MicroRNA and gene regulatory networks and their implication in cancer

scientific article published on January 2014

Label-free quantitation, an extension to 2DB.

scientific article published on 3 July 2009

Lithium protects against paraquat neurotoxicity by NRF2 activation and miR-34a inhibition in SH-SY5Y cells

scientific article published on 28 May 2015

Machine learning methods for microRNA gene prediction

scientific article published on January 2014

Mass spectrometric genomic data mining: Novel insights into bioenergetic pathways in Chlamydomonas reinhardtii

scientific article

MicroRNA categorization using sequence motifs and k-mers

scientific article

On the performance of pre-microRNA detection algorithms.

scientific article published on 24 August 2017

One Step Forward, Two Steps Back; Xeno-MicroRNAs Reported in Breast Milk Are Artifacts

scientific article (publication date: 2016)

The Chlamydomonas genome reveals the evolution of key animal and plant functions

scientific article

The impact of feature selection on one and two-class classification performance for plant microRNAs.

scientific article published on 21 June 2016

Towards an Internet of Science

scientific article published on 30 May 2019

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