List of works by Samuel V Angiuoli

A comparative genomic analysis of diverse clonal types of enterotoxigenic Escherichia coli reveals pathovar-specific conservation

scientific article published on 15 November 2010

A machine learning approach for somatic mutation discovery

scientific article published on 01 September 2018

CloVR-ITS: Automated internal transcribed spacer amplicon sequence analysis pipeline for the characterization of fungal microbiota

scientific article published on 04 February 2013

CloVR: a virtual machine for automated and portable sequence analysis from the desktop using cloud computing

scientific article

Comparative genomics of emerging human ehrlichiosis agents

scientific article

Comparative genomics of the neglected human malaria parasite Plasmodium vivax

scientific article

Comparative genomics of trypanosomatid parasitic protozoa

scientific article (publication date: 15 July 2005)

Direct detection of early-stage cancers using circulating tumor DNA.

scientific article published in August 2017

Draft genome of the filarial nematode parasite Brugia malayi

scientific article

Ergatis: a web interface and scalable software system for bioinformatics workflows

scientific article

GeMInA, Genomic Metadata for Infectious Agents, a geospatial surveillance pathogen database

scientific article

Gene synteny and evolution of genome architecture in trypanosomatids

article

Genome Sequence of Theileria parva, a Bovine Pathogen That Transforms Lymphocytes

scientific article

Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial "pan-genome"

scientific article

Genome degradation in Brucella ovis corresponds with narrowing of its host range and tissue tropism

scientific article

Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii

scientific article

Genomic analyses of gynaecologic carcinosarcomas reveal frequent mutations in chromatin remodelling genes

scientific article

Global Phylogeny of Mycobacterium tuberculosis Based on Single Nucleotide Polymorphism (SNP) Analysis: Insights into Tuberculosis Evolution, Phylogenetic Accuracy of Other DNA Fingerprinting Systems, and Recommendations for a Minimal Standard SNP Set

scholarly article by Ingrid Filliol et al published 3 April 2006 in Journal of Bacteriology

Global phylogeny of Mycobacterium tuberculosis based on single nucleotide polymorphism (SNP) analysis: insights into tuberculosis evolution, phylogenetic accuracy of other DNA fingerprinting systems, and recommendations for a minimal standard SNP se

scientific article

Improving pan-genome annotation using whole genome multiple alignment

scientific article

Insights on Evolution of Virulence and Resistance from the Complete Genome Analysis of an Early Methicillin-Resistant Staphylococcus aureus Strain and a Biofilm-Producing Methicillin-Resistant Staphylococcus epidermidis Strain

scientific article

Integrated next-generation sequencing and avatar mouse models for personalized cancer treatment

scientific article

Meeting report: the fifth Genomic Standards Consortium (GSC) workshop.

scientific article published in June 2008

Meeting report: the fourth Genomic Standards Consortium (GSC) workshop.

scientific article published in June 2008

Mugsy: fast multiple alignment of closely related whole genomes

scientific article

Neisseria meningitidis is structured in clades associated with restriction modification systems that modulate homologous recombination

scientific article

Notch1 mutations are drivers of oral tumorigenesis

scientific article

Personalized genomic analyses for cancer mutation discovery and interpretation

scientific article published on April 2015

Progresses in the pursuit of aldose reductase inhibitors: The structure-based lead optimization step

scientific article published on 05 March 2012

Resources and costs for microbial sequence analysis evaluated using virtual machines and cloud computing

scientific article

Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species

scientific article

Sybil: methods and software for multiple genome comparison and visualization

scientific article

The IGS Standard Operating Procedure for Automated Prokaryotic Annotation ⬇️

scientific article

The Princeton Protein Orthology Database (P-POD): a comparative genomics analysis tool for biologists

scientific article

The genome sequence of Bacillus cereus ATCC 10987 reveals metabolic adaptations and a large plasmid related to Bacillus anthracis pXO1

scientific article

The minimum information about a genome sequence (MIGS) specification

scientific article

Toward a standards-compliant genomic and metagenomic publication record

scientific article

Toward an online repository of Standard Operating Procedures (SOPs) for (meta)genomic annotation

scientific article

Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp.

scientific article

Using Sybil for interactive comparative genomics of microbes on the web.

scientific article

Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species

scientific article

Paulina is supported by:

About Paulina

Help