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List of works by Pasi K. Korhonen

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The genome and developmental transcriptome of the strongylid nematode Haemonchus contortus

scientific article
The Opisthorchis viverrini genome provides insights into life in the bile duct

scientific article published on 9 July 2014
Genome and transcriptome of the porcine whipworm Trichuris suis

scientific article published in July 2014
Genetic blueprint of the zoonotic pathogen Toxocara canis

scientific article published on 4 February 2015
Low cost whole-organism screening of compounds for anthelmintic activity.

scientific article published on 5 March 2015
Lucilia cuprina genome unlocks parasitic fly biology to underpin future interventions.

scientific article published on 25 June 2015
Phylogenomic and biogeographic reconstruction of the Trichinella complex

scientific article published in February 2016
Identification of G protein-coupled receptors in Schistosoma haematobium and S. mansoni by comparative genomics

scientific article
Mitochondrial genomes of Trichinella species and genotypes – a basis for diagnosis, and systematic and epidemiological explorations

scientific article published on December 2014
Hc-daf-2 encodes an insulin-like receptor kinase in the barber's pole worm, Haemonchus contortus, and restores partial dauer regulation

scientific article published on 12 April 2014
Making sense of genomes of parasitic worms: Tackling bioinformatic challenges

scientific article published on March 5, 2016
Comparative Transcriptomic Exploration Reveals Unique Molecular Adaptations of Neuropathogenic Trichobilharzia to Invade and Parasitize Its Avian Definitive Host

scientific article
Best practice data life cycle approaches for the life sciences

article
Bioinformatic exploration of RIO protein kinases of parasitic and free-living nematodes

scientific article published on 17 July 2014
Harnessing the Toxocara Genome to Underpin Toxocariasis Research and New Interventions

scientific article published on 28 February 2016
Getting the most out of parasitic helminth transcriptomes using HelmDB: implications for biology and biotechnology

scientific article published on 21 December 2012
Deguelin exerts potent nematocidal activity via the mitochondrial respiratory chain

scientific article published on 7 July 2017
Long-read sequencing reveals a 4.4 kb tandem repeat region in the mitogenome of Echinococcus granulosus (sensu stricto) genotype G1

scientific article published on 16 May 2019
Comparative transcriptomic analyses of male and female adult Toxocara canis.

scientific article published on 11 November 2016
Exploring the role of two interacting phosphoinositide 3-kinases of Haemonchus contortus.

scientific article
Understanding Haemonchus contortus Better Through Genomics and Transcriptomics.

scientific article published on 5 April 2016
Time-Dependent Transcriptional Changes in Axenic Giardia duodenalis Trophozoites

scientific article published on 4 December 2015
Whole-genome sequence of the bovine blood fluke Schistosoma bovis supports interspecific hybridization with S. haematobium

scientific article published on 23 January 2019
Insights into the immuno-molecular biology of Angiostrongylus vasorum through transcriptomics--prospects for new interventions

scientific article published on 27 July 2013
Use of a bioinformatic-assisted primer design strategy to establish a new nested PCR-based method for Cryptosporidium.

scientific article published on 23 October 2017
Exploring molecular variation in Schistosoma japonicum in China

scientific article published in December 2015
High throughput LC-MS/MS-based proteomic analysis of excretory-secretory products from short-term in vitro culture of Haemonchus contortus

article
The small RNA complement of adult Schistosoma haematobium.

scientific article
Molecular alterations during larval development of Haemonchus contortus in vitro are under tight post-transcriptional control

article
MicroRNAs of Toxocara canis and their predicted functional roles

scientific article published on 23 April 2016
The Haemonchus contortus kinome--a resource for fundamental molecular investigations and drug discovery

scientific article
The barber's pole worm CAP protein superfamily--A basis for fundamental discovery and biotechnology advances

scientific article published on 31 July 2015
Divergent Transcriptional Responses to Physiological and Xenobiotic Stress in Giardia duodenalis

scientific article published on 25 July 2016
The developmental lipidome of Haemonchus contortus

scientific article published on 01 September 2018
Molecular characterization of the Haemonchus contortus phosphoinositide-dependent protein kinase-1 gene (Hc-pdk-1).

scientific article
Dafachronic acid promotes larval development in Haemonchus contortus by modulating dauer signalling and lipid metabolism

scientific article published on 23 July 2019
The apicoplast genomes of two taxonomic units of Babesia from sheep

scientific article published on 6 November 2016
Comparative bioinformatic analysis suggests that specific dauer-like signalling pathway components regulate Toxocara canis development and migration in the mammalian host

article
A blow to the fly - Lucilia cuprina draft genome and transcriptome to support advances in biology and biotechnology.

scientific article published on March 2016
A TGF-β type I receptor-like molecule with a key functional role in Haemonchus contortus development

article
Molecular evidence for distinct modes of nutrient acquisition between visceral and neurotropic schistosomes of birds

scientific article published in Scientific Reports
An Evaluation of Machine Learning Approaches for the Prediction of Essential Genes in Eukaryotes Using Protein Sequence-Derived Features

scientific article published on 08 June 2019
Analysis of the transcriptome of adult Dictyocaulus filaria and comparison with Dictyocaulus viviparus, with a focus on molecules involved in host-parasite interactions

scientific article published on 31 January 2014
Mitochondrial genomic comparison of Clonorchis sinensis from South Korea with other isolates of this species

scientific article published on 22 February 2017
High-quality Schistosoma haematobium genome achieved by single-molecule and long-range sequencing

scientific article published on 01 September 2019
The complement of family M1 aminopeptidases of Haemonchus contortus--Biotechnological implications.

scientific article
The Battle Against Flystrike - Past Research and New Prospects Through Genomics.

scientific article published on 5 May 2017
Common workflow language (CWL)-based software pipeline for de novo genome assembly from long- and short-read data

scientific article published on 01 April 2019
Trehalose 6-phosphate phosphatases of Pseudomonas aeruginosa

scientific article published on 24 April 2018
Improved genomic resources and new bioinformatic workflow for the carcinogenic parasite Clonorchis sinensis: Biotechnological implications

scientific article published on 15 February 2018

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