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List of works by Vivek Kapur

A 38-kilobase pathogenicity island specific for Mycobacterium avium subsp. paratuberculosis encodes cell surface proteins expressed in the host

scientific article

A conserved Streptococcus pyogenes extracellular cysteine protease cleaves human fibronectin and degrades vitronectin

scientific article published in November 1993

A rational framework for evaluating the next generation of vaccines against Mycobacterium avium subspecies paratuberculosis

scientific article

Accelerating drug discovery via organs-on-chips.

scientific article

Amplified fragment length polymorphism to detect clonal diversity and distribution of Mycobacterium avium subspecies paratuberculosis in selected Minnesota dairy cattle

scientific article published on 01 July 2005

An analysis of the use of genomic DNA as a universal reference in two channel DNA microarrays

scientific article

Application of recombinant fimbrial protein for the specific detection of Salmonella enteritidis infection in poultry

scientific article published in November 1998

Application of the genome sequence to address concerns that Mycobacterium avium subspecies paratuberculosis might be a foodborne pathogen

scientific article

Association of Germ-line Polymorphisms in the Feline p53 Gene with Genetic Predisposition to Vaccine-Associated Feline Sarcoma

article

Association of bacteria with hydrocephalus in Ugandan infants

scientific article published on January 2011

Avian metapneumovirus phosphoprotein targeted RNA interference silences the expression of viral proteins and inhibits virus replication

scientific article

BCG vaccination reduces bovine tuberculosis transmission, improving prospects for elimination

scientific article published on 28 March 2024

Characterization and expression analysis of Staphylococcus aureus pathogenicity island 3. Implications for the evolution of staphylococcal pathogenicity islands

scientific article published on 30 January 2002

Characterization of a two-component system, devR-devS, of Mycobacterium tuberculosis

scientific journal article

Characterization of genetic differences between Mycobacterium avium subsp. paratuberculosis type I and type II isolates

scientific article

Characterization of novel coding sequences specific to Mycobacterium avium subsp. paratuberculosis: implications for diagnosis of Johne's Disease

scientific article

Characterization of the pheromone response of the Enterococcus faecalis conjugative plasmid pCF10: complete sequence and comparative analysis of the transcriptional and phenotypic responses of pCF10-containing cells to pheromone induction

scientific article

Cloning and development of synthetic internal amplification control for Bacillus anthracis real-time polymerase chain reaction assays

scientific article published on 29 May 2008

Comparative analysis of Mycobacterium avium subsp. paratuberculosis isolates from cattle, sheep and goats by short sequence repeat and pulsed-field gel electrophoresis typing

scientific article

Comparative analysis of super-shedder strains of Escherichia coli O157:H7 reveals distinctive genomic features and a strongly aggregative adherent phenotype on bovine rectoanal junction squamous epithelial cells

scientific article

Comparative genomic analysis of Mycobacterium avium subspecies obtained from multiple host species

scientific article

Comparative genomic hybridizations reveal genetic regions within the Mycobacterium avium complex that are divergent from Mycobacterium avium subsp. paratuberculosis isolates

scientific article

Comparative genomics of two super-shedder isolates of Escherichia coli O157:H7.

scientific article

Comparative transcriptional analysis of human macrophages exposed to animal and human isolates of Mycobacterium avium subspecies paratuberculosis with diverse genotypes

scientific article

Comparison of O-Antigen Gene Clusters of All O-Serogroups of Escherichia coli and Proposal for Adopting a New Nomenclature for O-Typing

scientific article published on 29 January 2016

Complete Genome Sequence of Escherichia coli Strain RS218 (O18:H7:K1), Associated with Neonatal Meningitis

scientific article published on 23 July 2015

Complete Genome Sequence of Mycobacterium avium subsp. paratuberculosis, Isolated from Human Breast Milk

scientific article published on 06 February 2014

Complete Genome Sequence of Mycobacterium orygis Strain 51145

scientific article published on 07 January 2021

Complete Genome Sequence of SS52, a Strain of Escherichia coli O157:H7 Recovered from Supershedder Cattle

scientific article published on 19 March 2015

Complete Genome Sequence of the Apicomplexan, Cryptosporidium parvum

scientific article

Complete genomic sequence of Pasteurella multocida, Pm70

scientific article

Complete genomic sequence of bacteriophage felix o1.

scientific article

Complete nucleotide sequence of pRS218, a large virulence plasmid, that augments pathogenic potential of meningitis-associated Escherichia coli strain RS218.

scientific article

Completion of the genome sequence of Brucella abortus and comparison to the highly similar genomes of Brucella melitensis and Brucella suis

scientific article

Conditional Function of Autoaggregative Protein Cah and Common cah Mutations in Shiga Toxin-Producing Escherichia coli

scientific article published on 20 October 2017

Conserved, breed-dependent, and subline-dependent innate immune responses of Fayoumi and Leghorn chicken embryos to Newcastle disease virus infection

article

Correction: Comparison of O-Antigen Gene Clusters of All O-Serogroups of Escherichia coli and Proposal for Adopting a New Nomenclature for O-Typing

scientific article published on 27 April 2016

Current understanding of the genetic diversity of Mycobacterium avium subsp. paratuberculosis

scientific article

Cytokine responses of bovine macrophages to diverse clinical Mycobacterium avium subspecies paratuberculosis strains

scientific article

DNA fingerprinting of Pasteurella multocida recovered from avian sources

scientific article

Detection of antibodies to U.S. isolates of avian pneumovirus by a recombinant nucleocapsid protein-based sandwich enzyme-linked immunosorbent assay

scientific article

Detection of the top six non-O157 Shiga toxin-producing Escherichia coli O groups by ELISA.

scientific article

Development and characterization of monoclonal antibodies and aptamers against major antigens of Mycobacterium avium subsp. paratuberculosis

scientific article published on 7 March 2007

Development and use of a partial Mycobacterium avium subspecies paratuberculosis protein array

scientific article published on February 2008

Differentiation of embryonic stem cells conditionally expressing neurogenin 3.

scientific article published on 29 June 2006

Early detection of Mycobacterium avium subsp. paratuberculosis infection in cattle with multiplex-bead based immunoassays.

scientific article published on 19 December 2017

Erratum: Corrigendum: The genome of Cryptosporidium hominis

scientific article published in Nature

Evaluation of eight live attenuated vaccine candidates for protection against challenge with virulent Mycobacterium avium subspecies paratuberculosis in mice

scientific article

Evaluation of novel oral vaccine candidates and validation of a caprine model of Johne's disease

scientific article published on 04 March 2014

Experimental challenge models for Johne's disease: a review and proposed international guidelines

scientific article published on 27 March 2007

Expression and immunogenicity of proteins encoded by sequences specific to Mycobacterium avium subsp. paratuberculosis

scientific article published on January 2004

Fine-structure molecular epidemiological analysis of Staphylococcus aureus recovered from cows

article

Full-genome dissection of an epidemic of severe invasive disease caused by a hypervirulent, recently emerged clone of group A Streptococcus

scientific article published on 11 February 2012

Genome scale comparison of Mycobacterium avium subsp. paratuberculosis with Mycobacterium avium subsp. avium reveals potential diagnostic sequences

scientific article

Genome sequence and comparative microarray analysis of serotype M18 group A Streptococcus strains associated with acute rheumatic fever outbreaks

scientific article

Genome sequence survey identifies unique sequences and key virulence genes with unusual rates of amino Acid substitution in bovine Staphylococcus aureus

scientific article

Genome sequencing of ovine isolates of Mycobacterium avium subspecies paratuberculosis offers insights into host association

scientific article

Genomic comparison of Mycobacterium avium subsp. paratuberculosis sheep and cattle strains by microarray hybridization

scientific article

Genomic homogeneity between Mycobacterium avium subsp. avium and Mycobacterium avium subsp. paratuberculosis belies their divergent growth rates ⬇️

scientific article published on May 9, 2003

Genomic scale analysis of Pasteurella multocida gene expression during growth within the natural chicken host

scientific article

Genomic-scale analysis of Pasteurella multocida gene expression during growth within liver tissue of chickens with fowl cholera

article

Genomics and genetics of Cryptosporidium parvum: the key to understanding cryptosporidiosis

scientific article

High-throughput sequencing of 16S rRNA Gene Reveals Substantial Bacterial Diversity on the Municipal Dumpsite

scientific article

Horizontal gene transfer among group A streptococci: implications for pathogenesis and epidemiology

scientific article

Identification and analysis of safener-inducible expressed sequence tags in Populus using a cDNA microarray

scientific article

Identification of Bacillus anthracis, Brucella spp., and Coxiella burnetii DNA signatures from bushmeat

scientific article published on 21 July 2021

Identification of Novel Seroreactive Antigens in Johne's Disease Cattle by Using the Mycobacterium tuberculosis Protein Array

scientific article published on 17 May 2017

Identification of sero-reactive antigens for the early diagnosis of Johne's disease in cattle

scientific article

Identification, cloning, and sequencing of DNA essential for encapsulation of Streptococcus pneumoniae

scientific article published on October 1995

Impact of Helminth Infections and Nutritional Constraints on the Small Intestine Microbiota

scientific article

Initiated Chemical Vapor Deposition (iCVD) of Conformal Polymeric Nanocoatings for the Surface Modification of High-Aspect-Ratio Pores

Innate Immune Genes Associated With Newcastle Disease Virus Load in Chick Embryos From Inbred and Outbred Lines

scientific article published on 20 June 2019

Interferon-inducible gene expression signature in peripheral blood cells of patients with severe lupus

scientific article (publication date: 4 March 2003)

MAP1272c encodes an NlpC/P60 protein, an antigen detected in cattle with Johne's disease

scientific article

MGView: an alignment and visualization tool to enhance gap closure of microbial genomes

scientific article

Managing incidental findings in human subjects research: analysis and recommendations

scientific article published on January 2008

Microbial Diversity in Bushmeat Samples Recovered from the Serengeti Ecosystem in Tanzania

scientific article published on 02 December 2019

Molecular Epidemiology of Mycobacterium avium subsp. paratuberculosis on Dairy Farms

scientific article

Molecular correlates of host specialization in Staphylococcus aureus

scientific article

Molecular epidemiology of Mycobacterium avium subsp. paratuberculosis isolates recovered from wild animal species

scientific article published on April 2004

Molecular epidemiology of Mycobacterium avium subsp. paratuberculosis: evidence for limited strain diversity, strain sharing, and identification of unique targets for diagnosis.

scientific article

Molecular population genetic analysis of aStreptococcus pyogenesbacteriophage-encoded hyaluronidase gene: recombination contributes to allelic variation

article

Molecular population genetic analysis of the streptokinase gene of Streptococcus pyogenes: mosaic alleles generated by recombination

scientific article

Molecular species identification of bushmeat recovered from the Serengeti ecosystem in Tanzania

scientific article published on 14 September 2020

Multilocus short sequence repeat sequencing approach for differentiating among Mycobacterium avium subsp. paratuberculosis strains

scientific article published on April 2004

Mycobacterium tuberculosis-induced cytokine and chemokine expression by human microglia and astrocytes: effects of dexamethasone

scientific article published on 9 November 2005

Non-congruent relationships between variation in emm gene sequences and the population genetic structure of group A streptococci

scientific article published on November 1994

Nonfimbrial Adhesin Mutants Reveal Divergent <i>Escherichia coli</i> O157:H7 Adherence Mechanisms on Human and Cattle Epithelial Cells

scientific article published on 29 January 2021

Novel gene expression profiles define the metabolic and physiological processes characteristic of wood and its extractive formation in a hardwood tree species, Robinia pseudoacacia

scientific article

Origin and interstate spread of a New York City multidrug-resistant Mycobacterium tuberculosis clone family

scientific article published on February 1996

PBP3 inhibition elicits adaptive responses in Pseudomonas aeruginosa.

scientific article published on 31 August 2006

Partial genome sequencing of Rhodococcus equi ATCC 33701.

scientific article

Pasteurella multocida gene expression in response to iron limitation

scientific article

Pathogenomic Analysis of the Common BovineStaphylococcus aureusClone (ET3): Emergence of a Virulent Subtype with Potential Risk to Public Health

article

Performance evaluation of five commercial real-time PCR reagent systems using TaqMan assays for B. anthracis detection

scientific article

Peste des petits ruminants Virus Transmission Scaling and Husbandry Practices That Contribute to Increased Transmission Risk: An Investigation among Sheep, Goats, and Cattle in Northern Tanzania

scientific article published on 24 August 2020

Prevalence of Bovine Tuberculosis in India: A systematic review and meta-analysis.

scientific article

Profiling bovine antibody responses to Mycobacterium avium subsp. paratuberculosis infection by using protein arrays

scientific article

Rapid Detection of Escherichia coli O157 and Shiga Toxins by Lateral Flow Immunoassays

scientific article published on 25 March 2016

Rapid detection and typing of strains of Mycobacterium avium subsp. paratuberculosis from broth cultures

scientific article published on May 2005

Rapid expression of Mycobacterium avium subsp. paratuberculosis recombinant proteins for antigen discovery

scientific article published on November 2006

Reconsidering Mycobacterium bovis as a proxy for zoonotic tuberculosis: a molecular epidemiological surveillance study

scientific article published on 01 June 2020

Regulation of host cell transcriptional physiology by the avian pneumovirus provides key insights into host-pathogen interactions

scientific article

Repression of the Staphylococcus aureus accessory gene regulator in serum and in vivo

scientific article published on February 2002

Screening of Mycobacterium avium subsp. paratuberculosis mutants for attenuation in a bovine monocyte-derived macrophage model

scientific article

Separating Putative Pathogens from Background Contamination with Principal Orthogonal Decomposition: Evidence for Leptospira in the Ugandan Neonatal Septisome

scientific article published on 13 June 2016

Sequence analysis of the Staphylococcus aureus srrAB loci reveals that truncation of srrA affects growth and virulence factor expression

scientific article

Sequence analysis of the matrix (M2) protein gene of avian pneumovirus recovered from turkey flocks in the United States

scientific article

Sequence analysis of the nucleocapsid and phosphoprotein genes of avian pneumoviruses circulating in the US.

scientific article published in November 2001

Short-sequence-repeat analysis of Mycobacterium avium subsp. paratuberculosis and Mycobacterium avium subsp. avium isolates collected from animals throughout the United States reveals both stability of loci and extensive diversity

scientific article

Suppression subtractive hybridization coupled with microarray analysis to examine differential expression of genes in virus infected cells

scientific article

Telomeric sequences of Cryptosporidium parvum

scientific article published in August 1998

The complete genome sequence of Mycobacterium avium subspecies paratuberculosis

scientific article

The evidence for Mycobacterium paratuberculosis in Crohn's disease

scientific article published on January 2008

The genome of Cryptosporidium hominis

scientific article

The microbial spectrum of neonatal sepsis in Uganda: recovery of culturable bacteria in mother-infant pairs

scientific article

TimeView: for comparative gene expression analysis

scientific article published in January 2006

Transcriptional Innate Immune Response of the Developing Chicken Embryo to Newcastle Disease Virus Infection.

scientific article published on 27 February 2018

Transcriptional Response of Enterococcus faecalis V583 to Erythromycin.

scientific article published in September 2005

Transcriptional analysis of avian embryonic tissues following infection with avian infectious bronchitis virus

scientific article

Transcriptional analysis of diverse strains Mycobacterium avium subspecies paratuberculosis in primary bovine monocyte derived macrophages

scientific article

Transcriptional response of Enterococcus faecalis V583 to erythromycin

scientific article

Transcriptional response of Escherichia coli to temperature shift

scientific article published in May 2005

Transcriptional response of Pasteurella multocida to defined iron sources

scientific article

Transcriptional response of Pasteurella multocida to nutrient limitation

scientific article

Transcriptional response of avian cells to infection with Newcastle disease virus

scientific article published in January 2005

Transcriptional response of human microglial cells to interferon-gamma

scientific article

Vaccination with streptococcal extracellular cysteine protease (interleukin-1β convertase) protects mice against challenge with heterologous group A streptococci

article by Vivek Kapur et al published June 1994 in Microbial Pathogenesis

Whole genome sequencing of diverse Shiga toxin-producing and non-producing Escherichia coli strains reveals a variety of virulence and novel antibiotic resistance plasmids.

scientific article published on 31 December 2015

iMAP: an integrated bioinformatics and visualization pipeline for microbiome data analysis

scientific article published on 03 July 2019

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