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List of works by David J. Schneider

A draft genome sequence of Pseudomonas syringae pv. tomato T1 reveals a type III effector repertoire significantly divergent from that of Pseudomonas syringae pv. tomato DC3000.

scientific article

A new minor histocompatibility locus linked to H-3 ⬇️

scientific article published on 01 June 1981

Ab initiodynamics of rapid fracture

Analysis of the small RNA spf in the plant pathogen Pseudomonas syringae pv. tomato strain DC3000

article

Bioinformatics-enabled identification of the HrpL regulon and type III secretion system effector proteins of Pseudomonas syringae pv. phaseolicola 1448A.

scientific article

Characterization of the Fur regulon in Pseudomonas syringae pv. tomato DC3000

scientific article

Characterization of the PvdS-regulated promoter motif in Pseudomonas syringae pv. tomato DC3000 reveals regulon members and insights regarding PvdS function in other pseudomonads

scientific article

Closing the circle on the discovery of genes encoding Hrp regulon members and type III secretion system effectors in the genomes of three model Pseudomonas syringae strains

scientific article published on November 2006

Complete genome sequence of the plant pathogen Erwinia amylovora strain ATCC 49946.

scientific article published on 29 January 2010

Complex responses to culture conditions inPseudomonas syringaepv.tomatoDC3000 continuous cultures: The role of iron in cell growth and virulence factor induction

article

Creating a buzz about insect genomes

scientific article published in March 2011

Deletions in the repertoire of Pseudomonas syringae pv. tomato DC3000 type III secretion effector genes reveal functional overlap among effectors

scientific article

Development and Mapping of 2240 New SSR Markers for Rice (Oryza sativa L.) (Supplement)

article

Development and mapping of 2240 new SSR markers for rice (Oryza sativa L.).

scientific article

Effect of iron concentration on the growth rate of Pseudomonas syringae and the expression of virulence factors in hrp-inducing minimal medium

scientific article published on 06 March 2009

Epidemic fronts in complex networks with metapopulation structure

scientific article published on 15 July 2013

Evolving technologies for growing, imaging and analyzing 3D root system architecture of crop plants

scientific article published on 18 December 2015

Functional and computational analysis of amino acid patterns predictive of type III secretion system substrates in Pseudomonas syringae

scientific article

Functional, structural and phylogenetic analysis of domains underlying the Al sensitivity of the aluminum-activated malate/anion transporter, TaALMT1.

scientific article published on 5 November 2013

Genome-wide identification of transcriptional start sites in the plant pathogen Pseudomonas syringae pv. tomato str. DC3000.

scientific article

Genomewide identification of Pseudomonas syringae pv. tomato DC3000 promoters controlled by the HrpL alternative sigma factor

scientific article

Genomewide identification of proteins secreted by the Hrp type III protein secretion system of Pseudomonas syringae pv. tomato DC3000

scientific article

Genomic mining type III secretion system effectors in Pseudomonas syringae yields new picks for all TTSS prospectors

scientific article

Global transcriptional responses of Pseudomonas syringae DC3000 to changes in iron bioavailability in vitro

scientific article

HopX1 in Erwinia amylovora functions as an avirulence protein in apple and is regulated by HrpL.

scientific article published on 28 November 2011

Identification of a twin-arginine translocation system in Pseudomonas syringae pv. tomato DC3000 and its contribution to pathogenicity and fitness

scientific article

Immune responses in vitro

article

Instability dynamics in three-dimensional fracture: An atomistic simulation

article

Lifestyles of the effector rich: genome-enabled characterization of bacterial plant pathogens

scientific article published on 10 June 2009

Lineage-specific regions inPseudomonas syringaepv tomato DC3000

scientific article published on 01 January 2005

Magnetic Resonance Spectra and Statistical Geometry

scientific article published on January 2010

Multiple approaches to a complete inventory of Pseudomonas syringae pv. tomato DC3000 type III secretion system effector proteins

scientific article published in November 2006

Parameter Estimation as a Problem in Statistical Thermodynamics

scientific article

Rapid singular value decomposition for time-domain analysis of magnetic resonance signals by use of the lanczos algorithm

Roadmap to new virulence determinants in Pseudomonas syringae: insights from comparative genomics and genome organization

scientific article published on June 2008

Saturation mutagenesis of a CepR binding site as a means to identify new quorum-regulated promoters in Burkholderia cenocepacia

scientific article

Studying plant-pathogen interactions in the genomics era: beyond molecular Koch's postulates to systems biology

scientific article published on January 2010

The ECF sigma factor, PSPTO_1043, in Pseudomonas syringae pv. tomato DC3000 is induced by oxidative stress and regulates genes involved in oxidative stress response

scientific article published on 12 July 2017

The Perfect Club Benchmarks: Effective Performance Evaluation of Supercomputers

The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000

scientific article

The effect of target vector selection on the invariance of classifier performance measures

scientific article published on 31 March 2009

The plant pathogen Pseudomonas syringae pv. tomato is genetically monomorphic and under strong selection to evade tomato immunity

scientific article

Theory for dynamic lineshapes of strongly correlated two-spin systems

Transcriptome analysis of Pseudomonas syringae identifies new genes, noncoding RNAs, and antisense activity

scientific article

Two-strain competition in quasineutral stochastic disease dynamics ⬇️

scientific article published on 31 October 2014

Using multitype branching processes to quantify statistics of disease outbreaks in zoonotic epidemics

scientific article published on 4 March 2014

Whole-genome expression profiling defines the HrpL regulon of Pseudomonas syringae pv. tomato DC3000, allows de novo reconstruction of the Hrp cis clement, and identifies novel coregulated genes

scientific article

Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition

scientific article

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