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List of works by Rex R Malmstrom

A centimeter-long bacterium with DNA contained in metabolically active, membrane-bound organelles

scholarly article

A compendium of bacterial and archaeal single-cell amplified genomes from oxygen deficient marine waters

scientific article published on 27 May 2023

Activity-based, genome-resolved metagenomics uncovers key populations and pathways involved in subsurface conversions of coal to methane

scientific article published in 2021

Comparative genomics reveals electron transfer and syntrophic mechanisms differentiating methanotrophic and methanogenic archaea

scientific article published on 05 January 2022

Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage

scientific article

Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations.

scientific article published on 8 December 2017

Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

scientific article published in February 2018

Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

article

Decontamination of MDA reagents for single cell whole genome amplification

scientific article

Differential depth distribution of microbial function and putative symbionts through sediment-hosted aquifers in the deep terrestrial subsurface.

scientific article published on 29 January 2018

Dissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution

scientific article published in May 2022

Ecology of uncultured Prochlorococcus clades revealed through single-cell genomics and biogeographic analysis

scientific article published on 16 August 2012

Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations

scientific article published on 08 January 2016

Gill bacteria enable a novel digestive strategy in a wood-feeding mollusk.

scientific article

Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs

scientific article published on 27 January 2016

Large-scale maps of variable infection efficiencies in aquatic Bacteroidetes phage-host model systems.

scientific article published on 28 May 2016

Metabolic Network Analysis and Metatranscriptomics Reveal Auxotrophies and Nutrient Sources of the Cosmopolitan Freshwater Microbial Lineage acI.

scientific article published on July 2017

Minimum Information about an Uncultivated Virus Genome (MIUViG)

scientific article published on 17 December 2018

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.

scientific article

Obtaining genomes from uncultivated environmental microorganisms using FACS-based single-cell genomics

scientific article

SAR11 bacteria linked to ocean anoxia and nitrogen loss.

scientific article

Single-cell genomics of co-sorted Nanoarchaeota suggests novel putative host associations and diversification of proteins involved in symbiosis

scientific article published on 17 September 2018

Subsurface hydrocarbon degradation strategies in low- and high-sulfate coal seam communities identified with activity-based metagenomics

scientific article published on 17 February 2022

Temporal dynamics of Prochlorococcus ecotypes in the Atlantic and Pacific oceans

scientific article

The Epigenomic Landscape of Prokaryotes

scientific article

The microbiome of a bacterivorous marine choanoflagellate contains a resource-demanding obligate bacterial associate

scientific article published on 15 August 2022

Thousands of small, novel genes predicted in global phage genomes

scientific article published in 2022

Unlocking short read sequencing for metagenomics

scientific article

Visualizing in situ translational activity for identifying and sorting slow-growing archaeal-bacterial consortia

scientific article published on 28 June 2016

Whole genome amplification and de novo assembly of single bacterial cells

scientific article

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