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List of works by Paolo Franchini

Anaerobic Degradation of the Plant Sugar Sulfoquinovose Concomitant With HS Production: K-12 and sp. Strain DF1 as Co-culture Model

article

Animal tracking meets migration genomics: transcriptomic analysis of a partially migratory bird species.

scientific article published on 17 March 2017

Are sympatrically speciating Midas cichlid fish special? Patterns of morphological and genetic variation in the closely related species Archocentrus centrarchus

scientific article

Chromosomal rearrangements, phenotypic variation and modularity: a case study from a contact zone between house mouse Robertsonian races in Central Italy

scientific article published on 30 January 2016

Comparative genomics provides insights into molecular adaptation to hypermetamorphosis and cantharidin metabolism in blister beetles (Coleoptera: Meloidae)

scientific article published in 2024

Conservation and novelty in the microRNA genomic landscape of hyperdiverse cichlid fishes

scientific article published on 25 September 2019

Contrasting signatures of genomic divergence during sympatric speciation

scientific article published on 28 October 2020

Differential Growth-Related Gene Expression in Abalone (Haliotis midae) ⬇️

scientific article published on April 29, 2011

Divergent Allometric Trajectories in Gene Expression and Coexpression Produce Species Differences in Sympatrically Speciating Midas Cichlid Fish

scientific article published on 01 June 2019

Diving into divergence: Differentiation in swimming performances, physiology and gene expression between locally-adapted sympatric cichlid fishes

scientific article published on 11 November 2019

Evolutionary divergence of 3' UTRs in cichlid fishes.

scientific article published on 5 June 2018

Genetic linkage of distinct adaptive traits in sympatrically speciating crater lake cichlid fish

scientific article

Genetic mapping of horizontal stripes in Lake Victoria cichlid fishes: benefits and pitfalls of using RAD markers for dense linkage mapping

article

Genomic architecture of ecologically divergent body shape in a pair of sympatric crater lake cichlid fishes

scientific article published on 16 December 2013

Genomics and the origin of species

scientific article

Genomics of Adaptation to Multiple Concurrent Stresses: Insights from Comparative Transcriptomics of a Cichlid Fish from One of Earth's Most Extreme Environments, the Hypersaline Soda Lake Magadi in Kenya, East Africa.

scientific article published on 07 September 2015

Lateralized Feeding Behavior is Associated with Asymmetrical Neuroanatomy and Lateralized Gene Expressions in the Brain in Scale-Eating Cichlid Fish

scientific article published on 24 October 2017

Limited introgression from non‐native commercial strains and signatures of adaptation in the key pollinator <i>Bombus terrestris</i>

scientific article published in 2023

Long-term experimental hybridisation results in the evolution of a new sex chromosome in swordtail fish

scientific article published in Nature Communications

Mitochondrial DNA reveals hidden diversity and an ancestral lineage of the bank vole in the Italian peninsula

article

Parallel evolution of Nicaraguan crater lake cichlid fishes via non-parallel routes.

scientific article

Parsing parallel evolution: ecological divergence and differential gene expression in the adaptive radiations of thick-lipped Midas cichlid fishes from Nicaragua

scientific article published on 12 October 2012

Permanent draft genome sequence of sulfoquinovose-degrading Pseudomonas putida strain SQ1.

scientific article published on 22 July 2015

Phosphitispora fastidiosa gen. nov. sp. nov., a new dissimilatory phosphite-oxidizing anaerobic bacterium isolated from anaerobic sewage sludge

scholarly article published in 2021

Phylogenomics uncovers early hybridization and adaptive loci shaping the radiation of Lake Tanganyika cichlid fishes

scientific article published in Nature Communications

REDUCED GENE FLOW AT PERICENTROMERIC LOCI IN A HYBRID ZONE INVOLVING CHROMOSOMAL RACES OF THE HOUSE MOUSEMUS MUSCULUS DOMESTICUS

article

Reproductive isolation between chromosomal races of the house mouse Mus musculus domesticus in a parapatric contact area revealed by an analysis of multiple unlinked loci

scientific article published on 12 January 2008

Resampling-Based Approaches to Study Variation in Morphological Modularity ⬇️

scientific article published on July 16, 2013

Shaping development through mechanical strain: the transcriptional basis of diet-induced phenotypic plasticity in a cichlid fish

scientific article

The Comparative Genomic Landscape of Adaptive Radiation in Crater Lake Cichlid Fishes

scientific article published on 11 December 2020

The Role of microRNAs in the Repeated Parallel Diversification of Lineages of Midas Cichlid Fish from Nicaragua

scientific article

The evolutionary history ofXiphophorusfish and their sexually selected sword: a genome-wide approach using restriction site-associated DNA sequencing

scientific article published on 02 April 2013

The gut microbial community of Midas cichlid fish in repeatedly evolved limnetic-benthic species pairs

scientific article

The mole genome reveals regulatory rearrangements associated with adaptive intersexuality

scientific article

The venomous cocktail of the vampire snail Colubraria reticulata (Mollusca, Gastropoda)

scientific article

Towards understanding the genetic basis of mouth asymmetry in the scale-eating cichlid Perissodus microlepis

scientific article

Transcriptome characterization of the South African abalone Haliotis midae using sequencing-by-synthesis ⬇️

scientific article published on March 11, 2011

Transcriptomics of morphological color change in polychromatic Midas cichlids ⬇️

scientific article published on March 13, 2013

Transcriptomics of two evolutionary novelties: how to make a sperm-transfer organ out of an anal fin and a sexually selected "sword" out of a caudal fin.

scientific article

quaddRAD: a new high-multiplexing and PCR duplicate removal ddRAD protocol produces novel evolutionary insights in a nonradiating cichlid lineage.

scientific article

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