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List of works by Sang Yup Lee

<i>Escherichia coli</i> as a platform microbial host for systems metabolic engineering

scientific article published in 2021

A Dual-Gate Field-Effect Transistor for Label-Free Electrical Detection of Avian Influenza

article

A Novel Biosynthetic Pathway for the Production of Acrylic Acid through β-Alanine Route in Escherichia coli

scientific article published on 03 April 2020

A Simple DNA Chip for Diagnosis of Most Common Corneal Dystrophies Caused by ßigh3 Gene Mutations

article

A biomolecular detection method based on charge pumping in a nanogap embedded field-effect-transistor biosensor

article

A charge pumping technique to identify biomolecular charge polarity using a nanogap embedded biotransistor

A comprehensive metabolic map for production of bio-based chemicals

scholarly article published January 2019

A deep learning approach to evaluate the feasibility of enzymatic reactions generated by retrobiosynthesis

scientific article published on 02 January 2021

A nanoforest structure for practical surface-enhanced Raman scattering substrates

scientific article published on 10 February 2012

A physiology study of Escherichia coli overexpressing phosphoenolpyruvate carboxykinase

scientific article

A putative secreted solute binding protein, SCO6569 is a possible AfsR2-dependent down-regulator of actinorhodin biosynthesis in Streptomyces coelicolor

scientific article published in 2009

A safe and sustainable bacterial cellulose nanofiber separator for lithium rechargeable batteries

scientific article published on 09 September 2019

A self-assembled fusion protein-based surface plasmon resonance biosensor for rapid diagnosis of severe acute respiratory syndrome

scientific article published in April 2009

A study on the dynamics of the zraP gene expression profile and its application to the construction of zinc adsorption bacteria

scientific article

A systematic approach for high-level extracellular production of recombinant proteins in Escherichia coli

scientific article published in 2009

A systematic proteome-based approach for high-level extracellular production of recombinant proteins in Escherichia coli

scientific article published in 2008

A systems approach to traditional oriental medicine

scientific article published in March 2015

A well-ordered flower-like gold nanostructure for integrated sensors via surface-enhanced Raman scattering.

scientific article published on 18 May 2009

Acetone-butanol-ethanol production with high productivity using Clostridium acetobutylicum BKM19

article

Adaptive response to methylation damage in Escherichia coli studied by transcriptome and proteome analyses

scientific article published in 2008

Adsorption of Pyruvic and Succinic Acid by Amine-Functionalized SBA-15 for the Purification of Succinic Acid from Fermentation Broth

Advanced bacterial polyhydroxyalkanoates: towards a versatile and sustainable platform for unnatural tailor-made polyesters

scientific article

Advanced cleanup process of the free-flow microfluidic device for protein analysis

scientific article

Advances in CRISPR-Cas systems for RNA targeting, tracking and editing

scientific article published on 27 March 2019

Advances in microbial biosynthesis of metal nanoparticles

scientific article published on 25 August 2015

Alignment of SWNTs by protein-ligand interaction of functionalized magnetic particles under low magnetic fields

scientific article published in May 2011

An Underlap Channel-Embedded Field-Effect Transistor for Biosensor Application in Watery and Dry Environment

article

An engineered Escherichia coli having a high intracellular level of ATP and enhanced recombinant protein production

scientific article published on 16 December 2011

An underlap field-effect transistor for electrical detection of influenza

article

Application of metabolic flux analysis in metabolic engineering

scientific article

Application of systems biology for bioprocess development

scientific article published on 24 June 2008

Applications of DNA microarray in disease diagnostics

scientific article published on July 2009

Applications of genome-scale metabolic network model in metabolic engineering

scientific article

Aptamer-functionalized localized surface plasmon resonance sensor for the multiplexed detection of different bacterial species

scientific article published on 09 September 2014

Are We There Yet? How and When Specific Biotechnologies Will Improve Human Health

scientific article published on 13 June 2018

Assimilation of formic acid and CO by engineered equipped with reconstructed one-carbon assimilation pathways

article published in the Proceedings of the National Academy of Sciences of the United States of America

Au Nanowire-on-Film SERRS Sensor for Ultrasensitive Hg2+ Detection

scientific article published on 10 January 2011

Author Correction: A comprehensive metabolic map for production of bio-based chemicals

scholarly article

Automating Cloning by Natural Transformation

scientific article published on 24 November 2020

Bacterial polyhydroxyalkanoates

scientific article published on 01 January 1996

Batch and continuous fermentation of succinic acid from wood hydrolysate by Mannheimia succiniciproducens MBEL55E

article published in 2004

Bio-Vision 2016: the second national framework plan for biotechnology promotion in Korea

scientific article published on May 2008

Bio-based production of C2-C6 platform chemicals

scientific article published on 13 July 2012

Bio-based production of monomers and polymers by metabolically engineered microorganisms

scientific article published on 26 August 2015

Biocatalytic synthesis of polylactate and its copolymers by engineered microorganisms

scientific article published on 29 May 2019

Biorefineries for the production of top building block chemicals and their derivatives

scientific article

Biosynthesis and applications of iron oxide nanocomposites synthesized by recombinant Escherichia coli

scientific article published in 2022

Biosynthesis and characterization of poly(d-lactate-co-glycolate-co-4-hydroxybutyrate)

scientific article published on 13 April 2020

Biosynthesis of 2-Hydroxyacid-Containing Polyhydroxyalkanoates by Employing butyryl-CoA Transferases in Metabolically Engineered Escherichia coli

scientific article published in September 2017

Biosynthesis of Lactate-containing Polyhydroxyalkanoates in Recombinant Escherichia coli by Employing New CoA Transferases

scientific article published in 2016

Biosynthesis of Lactate-containing Polyhydroxyalkanoates in Recombinant Escherichia coli from Sucrose

scientific article published in 2014

Biosynthesis of R-3-hydroxyalkanoic acids by metabolically engineered Escherichia coli

scientific article published in January 2004

Biosynthesis of enantiopure (S)-3-hydroxybutyric acid in metabolically engineered Escherichia coli

scientific article published on 7 May 2008

Biosynthesis of lactate-containing polyesters by metabolically engineered bacteria

scientific article

Biosynthesis of poly(2-hydroxybutyrate-co-lactate) in metabolically engineered Escherichia coli

Biosynthesis of poly(2-hydroxyisovalerate-co-lactate) by metabolically engineered Escherichia coli

scientific article published on 7 September 2016

Biosynthesis of poly(3-hydroxybutyrate- co-3-hydroxyalkanoates) by metabolically engineered Escherichia coli strains

scientific article published in January 2004

Biosynthesis of polyhydroxyalkanoates containing 2-hydroxybutyrate from unrelated carbon source by metabolically engineered Escherichia coli ⬇️

scientific article published on August 14, 2011

Biosynthesis of polylactic acid and its copolymers using evolved propionate CoA transferase and PHA synthase

scientific article published in January 2010

Biotechnological applications of microbial proteomes

scientific article published on 04 January 2010

Biotransformation of p-xylene into terephthalic acid by engineered Escherichia coli

scientific article

Book review -Biochemical Pathways: An Atlas of Biochemistry and Molecular Biology. Second Edition

scholarly article by Sang Yup Lee published in November 2012

Broad-Spectrum Gene Repression Using Scaffold Engineering of Synthetic sRNAs

scientific article published on 06 June 2019

Butanol production from renewable biomass by clostridia

scientific article published on 07 August 2012

Butanol production from renewable biomass: Rediscovery of metabolic pathways and metabolic engineering ⬇️

scientific article published on August 5, 2011

CRISPR technologies for bacterial systems: Current achievements and future directions

scientific article published on 24 August 2016

CRISPR-Cas9 Based Engineering of Actinomycetal Genomes

scientific article published on 25 March 2015

CRISPR-Cas9 Toolkit for Actinomycete Genome Editing

scientific article published in January 2018

CRISPR-Cas9, CRISPRi and CRISPR-BEST-mediated genetic manipulation in streptomycetes

scientific article published on 10 July 2020

CRISPR/Cas-based genome engineering in natural product discovery

scientific article published on 01 September 2019

CRISPR/Cas9-coupled recombineering for metabolic engineering of Corynebacterium glutamicum

scientific article published on 22 June 2017

CRISPy-web: An online resource to design sgRNAs for CRISPR applications.

scientific article

Carbon sources-dependent carotenoid production in metabolically engineered Escherichia coli

scholarly article by Jongrae Kim et al published 8 April 2010 in World Journal of Microbiology and Biotechnology

Catalytic characteristics of specialty carbon blacks in decomposition of methane for hydrogen production

scholarly article in Carbon, vol. 46 no. 14, November 2008

Cell Surface Display of Poly(3-hydroxybutyrate) Depolymerase and its Application

scientific article published on 01 February 2020

Cell and protein manipulation

scientific article published in February 2009

Cell surface display of lipase in Pseudomonas putida KT2442 using OprF as an anchoring motif and its biocatalytic applications

scientific article

Cell-based method utilizing fluorescent Escherichia coli auxotrophs for quantification of multiple amino acids

scientific article published on 19 February 2014

Characterisation of the antibacterial properties of the recombinant phage endolysins AP50-31 and LysB4 as potent bactericidal agents against Bacillus anthracis

scientific article published on 8 January 2018

Characteristics of Poly(3-Hydroxybutyric Acid) Synthesis by Recombinant Escherichia colia

scientific article published on 01 May 1996

Characterization and engineering of Streptomyces griseofuscus DSM 40191 as a potential host for heterologous expression of biosynthetic gene clusters

scientific article published on 15 September 2021

Characterization and evaluation of corn steep liquid in acetone-butanol-ethanol production by Clostridium acetobutylicum

Characterization of a bacterial self-assembly surface layer protein and its application as an electrical nanobiosensor

scientific article published in January 2011

Characterization of the Arc two-component signal transduction system of the capnophilic rumen bacterium Mannheimia succiniciproducens

scientific article

Characterizing Escherichia coli DH5alpha growth and metabolism in a complex medium using genome-scale flux analysis

scientific article

Charge and dielectric effects of biomolecules on electrical characteristics of nanowire FET biosensors

Charge pumping technique to analyze the effect of intrinsically retained charges and extrinsically trapped charges in biomolecules by use of a nanogap embedded biotransistor

Chiral compounds from bacterial polyesters: Sugars to plastics to fine chemicals

scientific article published on 01 November 1999

Colored Petri net modeling and simulation of signal transduction pathways

scientific article published on 22 December 2005

Combined Deterministic−Stochastic Approach for Pharmacokinetic Modeling

Combined transcriptome and proteome analysis of Escherichia coli during high cell density culture

article

Combining a Nanowire SERRS Sensor and a Target Recycling Reaction for Ultrasensitive and Multiplex Identification of Pathogenic Fungi ⬇️

scientific article published on 08 September 2011

Combining metabolic engineering and biocompatible chemistry for high-yield production of homo-diacetyl and homo-(S,S)-2,3-butanediol.

scientific article published on 8 March 2016

Combining rational metabolic engineering and flux optimization strategies for efficient production of fumaric acid

scientific article published on 21 July 2015

Comparative analysis of envelope proteomes in Escherichia coli B and K-12 strains

scientific article

Comparative multi-omics systems analysis of Escherichia coli strains B and K-12 ⬇️

scientific article published on May 25, 2012

Comparative proteomic analysis of four biotechnologically important Escherichia coli strains for rational host selection

Comparative proteomic analysis of four biotechnologically important Escherichia coli strains for rational host strain selection

scientific article published in 2008

Comparative proteomic and genetic analyses reveal unidentified mutations in Escherichia coli XL1-Blue and DH5α.

scientific article published on 26 November 2010

Comparison of the extracellular proteomes of Escherichia coli B and K-12 strains during high cell density cultivation

scientific article

Complementary identification of multiple flux distributions and multiple metabolic pathways

scientific article published on May 2005

Complete Genome Sequence of the Metabolically Versatile Plant Growth-Promoting Endophyte Variovorax paradoxus S110 ⬇️

scientific article published on December 23, 2010

Comprehensive study of a detection mechanism and optimization strategies to improve sensitivity in a nanogap-embedded biotransistor

Computational Methods for Strain Design

Constitutive production of human leptin by fed-batch culture of recombinant rpoS- Escherichia coli.

scientific article

Constraints-based genome-scale metabolic simulation for systems metabolic engineering

scientific article published on 20 May 2009

Construction and Applications of Genome-Scalein silico Metabolic Models for Strain Improvement

Construction and characterization of shuttle vectors for succinic acid-producing rumen bacteria

scientific article

Construction and optimization of synthetic pathways in metabolic engineering

scientific article published on 10 March 2010

Construction of Bacillus thuringiensis Simulant Strains Suitable for Environmental Release

scientific article published on 3 March 2017

Construction of copper removing bacteria through the integration of two-component system and cell surface display

scientific article

Construction of homologous and heterologous synthetic sucrose utilizing modules and their application for carotenoid production in recombinant Escherichia coli ⬇️

scientific article published on December 13, 2012

Construction of plasmids, estimation of plasmid stability, and use of stable plasmids for the production of poly(3-hydroxybutyric acid) by recombinant Escherichia coli

scientific article published in February 1994

Continuous butanol production with reduced byproducts formation from glycerol by a hyper producing mutant of Clostridium pasteurianum

scientific article (publication date: 4 November 2011)

Continuous production of succinic acid using an external membrane cell recycle system

scientific article published in November 2009

Control of fed-batch fermentations

scientific article published on April 1999

Controllable gold-capped nanoporous anodic alumina chip for label-free, specific detection of bacterial cells

scholarly article in RSC Advances, vol. 7 no. 30, 2017

Corrigendum to "Metabolic engineering of Escherichia coli for high-level astaxanthin production with high productivity" [Metab. Eng. 49 (2018) 105-115]

scientific article published on 15 May 2019

Corrigendum to “In silico analysis of lactate producing metabolic network in Lactococcus lactis” [Enzyme Microb Technol 35 (2004) 654–662]

scholarly article published in Enzyme and Microbial Technology

Covalent attachment and hybridization of DNA oligonucleotides on patterned single-walled carbon nanotube films.

scientific article

Crystal structure of Ralstonia eutropha polyhydroxyalkanoate synthase C-terminal domain and reaction mechanisms

scientific article published on 3 November 2016

Current state and applications of microbial genome-scale metabolic models

article published in 2017

Current status and applications of genome-scale metabolic models

scientific article published on 13 June 2019

Current status of pan-genome analysis for pathogenic bacteria

scientific article published on 28 December 2019

DNA microarray for the identification of pathogens causing bloodstream infections

scientific article published in April 2010

DNA microarray-based detection of nosocomial pathogenic Pseudomonas aeruginosa and Acinetobacter baumannii

article

DNA microarray-based identification of bacterial and fungal pathogens in bloodstream infections

scientific article published on 07 October 2009

Data integration and analysis of biological networks

scientific article

Deciphering Clostridium tyrobutyricum Metabolism Based on the Whole-Genome Sequence and Proteome Analyses

scientific article

Deciphering bioplastic production

article

Deep learning enables high-quality and high-throughput prediction of enzyme commission numbers

scientific article published on 20 June 2019

Deep learning for metabolic pathway design

scientific article published in 2023

Deep learning improves prediction of drug-drug and drug-food interactions

article published in the Proceedings of the National Academy of Sciences of the United States of America

DeepTFactor: A deep learning-based tool for the prediction of transcription factors

scientific article published on 01 January 2021

Design and use of synthetic regulatory small RNAs to control gene expression in Escherichia coli

scientific article published on 08 August 2013

Design of homo-organic acid producing strains using multi-objective optimization

scientific article published on 23 December 2014

Detection of Single Nucleotide Polymorphisms by a Gold Nanowire-on-Film SERS Sensor Coupled with S1 Nuclease Treatment

scientific article published on 16 June 2011

Detection of the most common corneal dystrophies caused by BIGH3 gene point mutations using a multispot gold-capped nanoparticle array chip

scientific article

Determination of the Thermodynamically Dominant Metabolic Pathways

Developing a piggyBac Transposon System and Compatible Selection Markers for Insertional Mutagenesis and Genome Engineering in Yarrowia lipolytica

scientific article published in March 2018

Development of DNA microarray for pathogen detection

article

Development of DNA microarray for the monitoring of Escherichia coli metabolism

scientific article published in 1999

Development of Metabolic Engineering Strategies for Microbial Platform to Produce Bioplastics

Development of Recombinant Bacteria for the Degradation of Dibenzothiopheneaa

article

Development of Reflective Biosensor Using Fabrication of Functionalized Photonic Nanocrystals ⬇️

scientific article published on January 1, 2011

Development of a DNA chip for the diagnosis of the most common corneal dystrophies caused by mutations in the betaigh3 gene

scientific article published on 10 January 2007

Development of a Point-of-Care Testing Platform With a Nanogap-Embedded Separated Double-Gate Field Effect Transistor Array and Its Readout System for Detection of Avian Influenza

Development of a fully integrated microfluidic system for sensing infectious viral disease

scientific article published in July 2008

Development of a gene knockout system for Ralstonia eutropha H16 based on the broad-host-range vector expressing a mobile group II intron

scientific article published on 16 June 2010

Development of a markerless gene knock-out system for Mannheimia succiniciproducens using a temperature-sensitive plasmid

scientific article published on 14 November 2007

Development of a portable biosensor system for pesticide detection on a metal chip surface integrated with wireless communication

article

Development of a whole-cell biosensor by cell surface display of a gold-binding polypeptide on the gold surface

scientific article published on 16 February 2009

Development of anaerobically inducible nar promoter expression vectors for the expression of recombinant proteins in Escherichia coli

scientific article published on 25 November 2010

Development of chemically defined medium for Mannheimia succiniciproducens based on its genome sequence

scientific article published in May 2008

Development of gold nanoparticle-aptamer-based LSPR sensing chips for the rapid detection of Salmonella typhimurium in pork meat

scientific article published on 31 August 2017

Development of label-free optical diagnosis for sensitive detection of influenza virus with genetically engineered fusion protein ⬇️

scientific article published on December 27, 2011

Development of rice bran treatment process and its use for the synthesis of polyhydroxyalkanoates from rice bran hydrolysate solution

scientific article published on 28 January 2015

Development of sucrose-utilizing Escherichia coli K-12 strain by cloning β-fructofuranosidases and its application for L-threonine production

scientific article published on 14 August 2010

Development of the electrochemical biosensor for organophosphate chemicals using CNT/ionic liquid bucky gel electrode

article

Diagnosis of pathogens using DNA microarray

scientific article published on January 2008

Direct recovery of intracellular proteins from Candida utilis using reverse micelles in combination with a reducing agent

Display of bacterial lipase on the Escherichia coli cell surface by using FadL as an anchoring motif and use of the enzyme in enantioselective biocatalysis

scientific article published on September 2004

Display of lipase on the cell surface of Escherichia coli using OprF as an anchor and its application to enantioselective resolution in organic solvent

scientific article published in April 2005

Dissemination of antibiotic resistance genes from antibiotic producers to pathogens

scientific article

Distinct roles of β-galactosidase paralogues of the rumen bacterium Mannheimia succiniciproducens

scientific article published on 11 November 2011

Do genome-scale models need exact solvers or clearer standards?

scientific article published on 14 October 2015

Doping-free nanoscale complementary carbon-nanotube field-effect transistors with DNA-templated molecular lithography

scientific article

Double-gate nanowire field effect transistor for a biosensor

scientific article published in August 2010

Dynamic Modeling of Lactic Acid Fermentation Metabolism with Lactococcus lactis

scientific article published on February 1, 2011

E. coli moves into the plastic age

scientific article published on 01 January 1997

EcoProDB: the Escherichia coli protein database

scientific article published on 10 July 2007

Editorial: A Korean vision on Green Growth

scientific article published in August 2009

Editorial: A big “thank you” to Barbara

scientific article published on 01 December 2010

Editorial: A call for ethical regulation of Genetically Created Organisms (GCOs) beyond GMOs ⬇️

scientific article published on August 1, 2010

Editorial: Biochips and nanobiotechnology

scientific article published on 01 November 2009

Editorial: Biotechnology Journal shines the spotlight on ACB-2011

Editorial: Biotechnology in Korea--the next generation growth engine

scientific article published in May 2008

Editorial: Biotechnology's impact on sustainable development ⬇️

scientific article published on November 1, 2012

Editorial: Exploring microbes in biotech

scientific article published on 01 March 2010

Editorial: Flavors of international biotechnology

Editorial: Latest methods and advances in biotechnology

scientific article published in January 2014

Editorial: Methods and Advances - Biotech progress for science and our daily lives

scientific article published on 01 January 2015

Editorial: Methods and Advances in Biotech

scientific article published on 01 September 2009

Editorial: Michael Shuler's legacy in biochemical engineering

scientific article

Editorial: NextGen SynBio has arrived..

Editorial: State‐of‐the‐art reviews in industrial biotechnology ⬇️

scientific article published on 01 February 2012

Editorial: Systems biology for biotech applications

scientific article published on 01 July 2010

Editorial: biotechnology as an enabling technology and much more

scientific article published in August 2014

Editorial:Biotechnology Journalbrings more than biotechnology

scientific article published on 01 September 2015

Effect of acetic acid on poly-(3-hydroxybutyrate-CO-3-hydroxyvalerate) synthesis in recombinantEscherichia coli

Effect of complex nitrogen source on the synthesis and accumulation of poly(3-hydroxybutyric acid) by recombinantEscherichia coli in flask and fed-batch cultures

article

Effect of post-induction nutrient feeding strategies on the production of bioadhesive protein in Escherichia coli

article

Effective purification of succinic acid from fermentation broth produced by Mannheimia succiniciproducens

scientific article published in 2006

Effects of dissolved CO2 levels on the growth of Mannheimia succiniciproducens and succinic acid production

scientific article published in December 2007

Effects of introducing heterologous pathways on microbial metabolism with respect to metabolic optimality

Effects of medium components on the growth of Anaerobiospirillum succiniciproducens and succinic acid production

scientific article published in 1999

Effects of nutritional enrichment on acid production from degenerated (non-solventogenic) Clostridium acetobutylicum strain M5

scholarly article published on 4 May 2018

Effects of nutritional enrichment on the production of acetone-butanol-ethanol (ABE) by Clostridium acetobutylicum ⬇️

scientific article published on December 30, 2012

Efficient and economical recovery of poly(3-hydroxybutyrate) from recombinant Escherichia coli by simple digestion with chemicals

scientific article published on 01 March 1999

Efficient gene knockdown in Clostridium acetobutylicum by synthetic small regulatory RNAs

scientific article published on 17 August 2016

Efficient production of polylactic acid and its copolymers by metabolically engineered Escherichia coli

article

Efficient recovery of gamma-poly (glutamic acid) from highly viscous culture broth

scientific article published in November 2001

Electro-triggering and electrochemical monitoring of dopamine exocytosis from a single cell by using ultrathin electrodes based on Au nanowires

scientific article published on 8 December 2015

Electrotriggered, spatioselective, quantitative gene delivery into a single cell nucleus by Au nanowire nanoinjector

scientific article

Elucidation of multifaceted evolutionary processes of microorganisms by comparative genome-based analysis

scientific article published in November 2009

Enantioselective resolution of racemic compounds by cell surface displayed lipase

Engineering Clostridial Aldehyde/Alcohol Dehydrogenase for Selective Butanol Production

scientific article published in 2019

Engineering Escherichia coli for increased productivity of serine-rich proteins based on proteome profiling

scientific article

Engineering and application of synthetic nar promoter for fine-tuning the expression of metabolic pathway genes in Escherichia coli.

scientific article

Engineering of Escherichia coli fatty acid metabolism for the production of polyhydroxyalkanoates

Engineering of an oleaginous bacterium for the production of fatty acids and fuels

scientific article published on 17 June 2019

Engineering of microorganisms for the production of biofuels and perspectives based on systems metabolic engineering approaches

scientific article published on 25 August 2011

Engineering synergy in biotechnology

scientific article published on May 2014

Engineering the xylose-catabolizing Dahms pathway for production of poly(d-lactate-co-glycolate) and poly(d-lactate-co-glycolate-co-d-2-hydroxybutyrate) in Escherichia coli

scientific article published on 19 April 2017

Engineering tunable biosensors for monitoring putrescine in Escherichia coli

scientific article published on 18 December 2017

Enhanced Butanol Production Obtained by Reinforcing the Direct Butanol-Forming Route in Clostridium acetobutylicum ⬇️

scientific article published on October 23, 2012

Enhanced display of lipase on the Escherichia coli cell surface, based on transcriptome analysis

scientific article

Enhanced production of bacterial cellulose in Komagataeibacter xylinus via tuning of biosynthesis genes with synthetic RBS

scientific article published on 06 July 2020

Enhanced production of insulin-like growth factor I fusion protein in Escherichia coli by coexpression of the down-regulated genes identified by transcriptome profiling

scientific article

Enhanced production of recombinant proteins in Escherichia coli by filamentation suppression

scientific article

Enhanced production of succinic acid by metabolically engineeredEscherichia coli with amplified activities of malic enzyme and fumarase

Enhanced proteome profiling by inhibiting proteolysis with small heat shock proteins

scientific article published on November 2005

Enhanced succinic acid production by Mannheimia employing optimal malate dehydrogenase

scientific article published on 23 April 2020

Enrichment of specific monomer in medium-chain-length poly(3-hydroxyalkanoates) by amplification of fadD and fadE genes in recombinant Escherichia coli

article

Enzymatic formation of carbohydrate rings catalyzed by single-walled carbon nanotubes

scientific article published on 5 March 2016

Escherichia coli W as a new platform strain for the enhanced production of L‐Valine by systems metabolic engineering ⬇️

scientific article published on January 25, 2011

Escherichia coli is engineered to grow on CO2 and formic acid

scientific article published on 28 September 2020

Establishment of a biosynthesis pathway for (R)-3-hydroxyalkanoates in recombinant Escherichia coli

Evolution of the Metabolic Engineering Community

scientific article published on 01 July 2018

Excretion of human beta-endorphin into culture medium by using outer membrane protein F as a fusion partner in recombinant Escherichia coli

scientific article

Expanded synthetic small regulatory RNA expression platforms for rapid and multiplex gene expression knockdown

scientific article published on 16 April 2019

Extracellular proteome of Aspergillus terreus grown on different carbon sources

scientific article published on 8 June 2010

Fabrication of single-walled carbon nanotubes dotted with Au nanocrystals: Potential DNA delivery nanocarriers

scholarly article in Carbon, vol. 48 no. 4, April 2010

Facile Functionalization of Colloidal Gold Nanorods by the Specific Binding of an Engineered Protein that Is Preferred over CTAB Bilayers

Facile fabrication of multi-targeted and stable biochemical SERS sensors

scientific article published on 8 October 2013

Fed‐batch culture of Escherichia coli for L‐valine production based on in silico flux response analysis ⬇️

scientific article published on November 26, 2010

Fermentative butanol production by Clostridia

scientific article published on October 2008

Fermentative production of branched chain amino acids: a focus on metabolic engineering

scientific article published on January 2010

Filling the Gaps in the Kirromycin Biosynthesis: Deciphering the Role of Genes Involved in Ethylmalonyl-CoA Supply and Tailoring Reactions

scientific article published on 19 February 2018

Flux variability scanning based on enforced objective flux for identifying gene amplification targets

scientific article

Flux-coupled genes and their use in metabolic flux analysis

scientific article published on 21 March 2013

Flux-sum analysis identifies metabolite targets for strain improvement

scientific article published on 29 October 2015

Formation and functionalization of membraneless compartments in Escherichia coli

scientific article published on 29 June 2020

Formic acid as a secondary substrate for succinic acid production by metabolically engineered Mannheimia succiniciproducens

scientific article

Framework and resource for more than 11,000 gene-transcript-protein-reaction associations in human metabolism

scientific article published on 24 October 2017

Framework for network modularization and Bayesian network analysis to investigate the perturbed metabolic network

scientific article

Free-flow isoelectric focusing microfluidic device with glass coating by sol–gel methods

From genome sequence to integrated bioprocess for succinic acid production by Mannheimia succiniciproducens

scientific article published on 14 March 2008

Functionalization effects of single-walled carbon nanotubes as templates for the synthesis of silica nanorods and study of growing mechanism of silica

scientific article published in July 2010

Gene Expression Knockdown by Modulating Synthetic Small RNA Expression in Escherichia coli

scientific article

Genome Variations of Evolved Escherichia coli ET8 With a Rhodopsin-Based Phototrophic Metabolism.

scientific article published on 22 February 2018

Genome analysis of a hyper acetone-butanol-ethanol (ABE) producing Clostridium acetobutylicum BKM19.

scientific article published on 5 December 2016

Genome engineering and gene expression control for bacterial strain development

scientific article

Genome-Scale Metabolic Reconstruction of Actinomycetes for Antibiotics Production

scientific article published on 09 September 2018

Genome-Scale Network Modeling

Genome-based metabolic engineering of Mannheimia succiniciproducens for succinic acid production

scientific article

Genome-scale analysis of Mannheimia succiniciproducens metabolism

scientific article published in July 2007

Genome-scale metabolic model of methylotrophic yeast Pichia pastoris and its use for in silico analysis of heterologous protein production.

scientific article published in July 2010

Genome-scale metabolic model of the fission yeast Schizosaccharomyces pombe and the reconciliation of in silico/in vivo mutant growth ⬇️

scientific article published on July 5, 2012

Genome-scale metabolic network analysis and drug targeting of multi-drug resistant pathogen Acinetobacter baumannii AYE

scientific article published on 08 December 2009

Genome-scale reconstruction and in silico analysis of the Clostridium acetobutylicum ATCC 824 metabolic network

scientific article published on 29 August 2008

Genome-scale reconstruction and in silico analysis of the Ralstonia eutropha H16 for polyhydroxyalkanoate synthesis, lithoautotrophic growth, and 2-methyl citric acid production

scientific article

Genome‐wide identification of the subcellular localization of the Escherichia coli B proteome using experimental and computational methods ⬇️

scientific article published on February 17, 2011

Genomic and metabolic analysis of Komagataeibacter xylinus DSM 2325 producing bacterial cellulose nanofiber

scientific article published on 03 September 2019

Glutaric acid production by systems metabolic engineering of an l-lysine-overproducing Corynebacterium glutamicum

scholarly article

Graphene-based electrochemical biosensor for pathogenic virus detection

Hand in hand for a global outreach

scholarly article by Sang Yup Lee & Alois Jungbauer published May 2008 in Biotechnology Journal

Heat-responsive and time-resolved transcriptome and metabolome analyses of Escherichia coli uncover thermo-tolerant mechanisms

scientific article published on 19 October 2020

High cell density cultivation of Escherichia coli W using sucrose as a carbon source

scientific article published in 1993

High cell density culture of metabolically engineered Escherichia coli for the production of poly(3-hydroxybutyrate) in a defined medium

scientific article published in April 1998

High cell density fed-batch cultivation of Escherichia coli using exponential feeding combined with pH-stat

scientific article

High cell-density culture of Escherichia coli

scientific article

High level production of supra molecular weight poly (3-hydroxybutyrate) by metabolically engineeredEscherichia coli

article

High-level conversion of L-lysine into 5-aminovalerate that can be used for nylon 6,5 synthesis

scientific article

High-level production of 3-hydroxypropionic acid from glycerol as a sole carbon source using metabolically engineered Escherichia coli

scientific article published on 30 March 2020

High-speed fabrication of patterned colloidal photonic structures in centrifugal microfluidic chips

High-throughput identification of clinically important bacterial pathogens using DNA microarray.

scientific article published on 15 April 2009

Highly efficient DSB-free base editing for streptomycetes with CRISPR-BEST

scientific article published on 23 September 2019

Highly selective production of succinic acid by metabolically engineered Mannheimia succiniciproducens and its efficient purification

scientific article published on 12 April 2016

Ho Nam Chang special issue: life of a great biochemical engineer and his life-time contribution to high cell density culture

scientific article published in January 2010

Holographic deep learning for rapid optical screening of anthrax spores

scientific article

Homo-succinic acid production by metabolically engineered Mannheimia succiniciproducens

scientific article published on 13 October 2016

Homogeneous Biogenic Paramagnetic Nanoparticle Synthesis Based on a Microfluidic Droplet Generator

scientific article published on 23 April 2012

How to set up collaborations between academia and industrial biotech companies

scientific article published in March 2015

HpYPS1 and HpYPS7 encode functional aspartyl proteases localized at the cell surface in the thermotolerant methylotrophic yeast Hansenula polymorpha

scientific article published on 9 December 2011

Human genes with a greater number of transcript variants tend to show biological features of housekeeping and essential genes

scientific article published on 17 August 2015

Identification and characterization of a new enoyl coenzyme A hydratase involved in biosynthesis of medium-chain-length polyhydroxyalkanoates in recombinant Escherichia coli

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Identification of factors regulating Escherichia coli 2,3-butanediol production by continuous culture and metabolic flux analysis

scientific article published in May 2012

Identification of the cadmium-inducible Hansenula polymorpha SEO1 gene promoter by transcriptome analysis and its application to whole-cell heavy-metal detection systems

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Immobilization of genetically engineered fusion proteins on gold-decorated carbon nanotube hybrid films for the fabrication of biosensor platforms

scientific article published on 30 June 2010

Importance of redox balance on the production of succinic acid by metabolically engineered Escherichia coli

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Improved Production of a Bioadhesive Precursor Protein by Fed-Batch Cultivation of a Recombinant Escherichia coli with a pLysS Vector

Improved prediction of metabolic fluxes through genomic context analysis across organisms and stoichiometric analysis of carbon fluxes

In Memoriam of Prof. Bernard Witholt

scientific article published on 16 July 2015

In Vivo Synthesis of Diverse Metal Nanoparticles by Recombinant Escherichia coli

scientific article published in 2010

In Vivo Synthesis of Nanocomposites Using the Recombinant Escherichia coli

scientific article published on 17 September 2018

In silico analysis of lactate producing metabolic network in Lactococcus lactis

In silico analysis of the effects of H2 and CO2 on the metabolism of a capnophilic bacterium Mannheimia succiniciproducens.

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In silico genome-scale metabolic analysis of Pseudomonas putida KT2440 for polyhydroxyalkanoate synthesis, degradation of aromatics and anaerobic survival

scientific article published in July 2010

In silico identification of gene amplification targets for improvement of lycopene production

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In silico metabolic pathway analysis and design: succinic acid production by metabolically engineered Escherichia coli as an example

scientific article published on January 1, 2002

In silico perturbation of the effects of H2 and CO2 on the metabolism of a capnophilic bacterium, Mannheimia succiniciproducens

In silico prediction and validation of the importance of the Entner-Doudoroff pathway in poly(3-hydroxybutyrate) production by metabolically engineered Escherichia coli

scientific article published on September 2003

In vitro biosynthesis of metal nanoparticles in microdroplets

scientific article published on 12 July 2012

In vivo synthesis of diverse metal nanoparticles by recombinant Escherichia coli

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In vivo synthesis of europium selenide nanoparticles and related cytotoxicity evaluation of human cells

scientific article published on 24 August 2016

Incorporating metabolic flux ratios into constraint-based flux analysis by using artificial metabolites and converging ratio determinants

scientific article published on 4 March 2007

Industrial scale production of poly(3-hydroxybutyrate-co-3-hydroxyhexanoate).

scientific article published in October 2001

Integration of systems biology with bioprocess engineering: L: -threonine production by systems metabolic engineering of Escherichia coli

scientific article published on January 2010

Integrative genome-scale metabolic analysis of Vibrio vulnificus for drug targeting and discovery

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Investigation of Size Dependence on Sensitivity for Nanowire FET Biosensors

Isolation and genetic manipulation of the antibiotic down-regulatory gene, wblA ortholog for doxorubicin-producing Streptomyces strain improvement

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Kinetic model-based feed-forward controlled fed-batch fermentation of Lactobacillus rhamnosus for the production of lactic acid from Arabic date juice

scientific article published on 08 October 2013

Kinetic study for the extraction of succinic acid with TOA in fermentation broth; effects of pH, salt and contaminated acid

Kinetic study of organic acid formations and growth of Anaerobiospirillum succiniciproducens during continuous cultures

scientific article published in November 2009

Kinetic study on succinic acid and acetic acid formation during continuous cultures of Anaerobiospirillum succiniciproducens grown on glycerol.

scientific article published on 31 July 2009

Knowledge representation model for systems-level analysis of signal transduction networks

scientific article published in January 2004

Label-Free Detection of DNA Hybridization Using Pyrene-Functionalized Single-Walled Carbon Nanotubes: Effect of Chemical Structures of Pyrene Molecules on DNA Sensing Performance

scientific article published on 01 May 2011

Label-Free Detection of Leptin Antibody-Antigen Interaction by Using LSPR-Based Optical Biosensor

scientific article published on May 1, 2011

Label-Free and Real-Time Detection of Avian Influenza Using Nanowire Field Effect Transistors

scientific article published on September 2015

Label-free Electrochemical Biosensor Based on Graphene/Ionic Liquid Nanocomposite for the Detection of Organophosphate Pesticides

Label-free electrochemical biosensor in highly conductive carbon nanotube and gold nanocomplexes

Label-free electrochemical diagnosis of viral antigens with genetically engineered fusion protein

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Label-free optical biosensors for the detection of food toxin and pathogen using multi-spot nanoparticle array chip and fusion proteins

Label-free optical diagnosis of hepatitis B virus with genetically engineered fusion proteins

scientific article published on 4 June 2010

Large-Scale Highly Ordered Chitosan-Core Au-Shell Nanopatterns with Plasmonic Tunability: A Top-Down Approach to Fabricate Core-Shell Nanostructures

Long-term continuous adaptation of Escherichia coli to high succinate stress and transcriptome analysis of the tolerant strain

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MEMOTE for standardized genome-scale metabolic model testing

scientific article published on 01 March 2020

MFAML: a standard data structure for representing and exchanging metabolic flux models

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Machine learning applications in systems metabolic engineering

scientific article published on 30 September 2019

Mannheimia succiniciproducens phosphotransferase system for sucrose utilization

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MaoC Mediated Biosynthesis of Medium-chain-length Polyhydroxyalkanoates in Recombinant Escherichia coli from Fatty Acid

scientific article published in 2014

Markerless gene knockout and integration to express heterologous biosynthetic gene clusters in Pseudomonas putida

scientific article published on 08 May 2018

Membrane engineering via trans-unsaturated fatty acids production improves succinic acid production in Mannheimia succiniciproducens

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Memote: A community-driven effort towards a standardized genome-scale metabolic model test suite

MetaFluxNet, a program package for metabolic pathway construction and analysis, and its use in large-scale metabolic flux analysis of Escherichia coli.

scientific article published in January 2003

MetaFluxNet: the management of metabolic reaction information and quantitative metabolic flux analysis ⬇️

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Metabolic Engineering and Synthetic Biology in Strain Development ⬇️

scientific article published on November 16, 2012

Metabolic Engineering of Clostridium acetobutylicum ATCC 824 for Isopropanol-Butanol-Ethanol Fermentation ⬇️

scientific article published on December 30, 2011

Metabolic Engineering of Escherichia Coli for the Production of Polyhydroxyalkanoates

scientific article published in 1998

Metabolic Engineering of Escherichia coli for Efficient Production of 2-Pyrone-4,6-dicarboxylic Acid from Glucose

scientific article published on 21 August 2018

Metabolic Engineering of Escherichia coli for Natural Product Biosynthesis

scientific article published on 07 January 2020

Metabolic Engineering of Escherichia coli for the Production of 3-Hydroxypropionic Acid and Malonic Acid through β-Alanine Route

scientific article published on 29 February 2016

Metabolic Engineering of Escherichia coli for the Production of Hyaluronic Acid From Glucose and Galactose

scientific article published on 21 November 2019

Metabolic Engineering of Microorganisms for the Production of Natural Compounds

Metabolic and kinetic analysis of poly(3-hydroxybutyrate) production by recombinant Escherichia coli

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Metabolic engineering for the microbial production of marine bioactive compounds

scientific article published on 6 March 2017

Metabolic engineering for the production of dicarboxylic acids and diamines

scientific article published on 21 March 2019

Metabolic engineering for the production of hydrocarbon fuels

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Metabolic engineering for the synthesis of polyesters: A 100-year journey from polyhydroxyalkanoates to non-natural microbial polyesters

scientific article published on 28 May 2019

Metabolic engineering of Clostridium acetobutylicum M5 for highly selective butanol production

scientific article published in October 2009

Metabolic engineering of Clostridium acetobutylicum for butyric acid production with high butyric acid selectivity

scientific article published on 3 April 2014

Metabolic engineering of Clostridium acetobutylicum for enhanced production of butyric acid

scientific article published on 08 September 2013

Metabolic engineering of Clostridium acetobutylicum for the enhanced production of isopropanol‐butanol‐ethanol fuel mixture ⬇️

scientific article published on April 18, 2013

Metabolic engineering of Clostridium acetobutylicum for the production of butyl butyrate

scientific article published on 03 August 2018

Metabolic engineering of Corynebacterium glutamicum for L-arginine production

scientific article published on 5 August 2014

Metabolic engineering of Corynebacterium glutamicum for enhanced production of 5-aminovaleric acid

scientific article (publication date: 7 October 2016)

Metabolic engineering of Corynebacterium glutamicum for the production of L-ornithine

scientific article published on 29 September 2014

Metabolic engineering of Corynebacterium glutamicum for the production of glutaric acid, a C5 dicarboxylic acid platform chemical

scientific article published on 23 August 2018

Metabolic engineering of Escherichia coli for biosynthesis of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) from glucose

scientific article published on 11 October 2013

Metabolic engineering of Escherichia coli for direct production of 1,4-butanediol

scientific article published on 22 May 2011

Metabolic engineering of Escherichia coli for enhanced biosynthesis of poly(3-hydroxybutyrate) based on proteome analysis ⬇️

scientific article published on June 7, 2013

Metabolic engineering of Escherichia coli for enhanced production of succinic acid, based on genome comparison and in silico gene knockout simulation

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Metabolic engineering of Escherichia coli for high-level astaxanthin production with high productivity

scientific article published on 07 August 2018

Metabolic engineering of Escherichia coli for secretory production of free haem

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Metabolic engineering of Escherichia coli for the enhanced production of l -tyrosine

scientific article published on 01 August 2018

Metabolic engineering of Escherichia coli for the production of 1,3-diaminopropane, a three carbon diamine

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Metabolic engineering of Escherichia coli for the production of 1-propanol

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Metabolic engineering of Escherichia coli for the production of 3-aminopropionic acid

scientific article published on 7 June 2015

Metabolic engineering of Escherichia coli for the production of 5-aminovalerate and glutarate as C5 platform chemicals ⬇️

scientific article published on December 14, 2012

Metabolic engineering of Escherichia coli for the production of L-valine based on transcriptome analysis and in silico gene knockout simulation

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Metabolic engineering of Escherichia coli for the production of cadaverine: A five carbon diamine

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Metabolic engineering of Escherichia coli for the production of four-, five- and six-carbon lactams

scientific article published on 5 April 2017

Metabolic engineering of Escherichia coli for the production of fumaric acid

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Metabolic engineering of Escherichia coli for the production of indirubin from glucose.

scientific article published in January 2018

Metabolic engineering of Escherichia coli for the production of l-isoleucine

scholarly article by Jae Eun Oh et al published November 2009 in Journal of Bioscience and Bioengineering

Metabolic engineering of Escherichia coli for the production of large spider dragline silk proteins

scholarly article by Xiao-Xia Xia et al published November 2009 in Journal of Bioscience and Bioengineering

Metabolic engineering of Escherichia coli for the production of malic acid

scholarly article by Soo Yun Moon et al published June 2008 in Biochemical Engineering Journal

Metabolic engineering of Escherichia coli for the production of medium-chain-length polyhydroxyalkanoates rich in specific monomers

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Metabolic engineering of Escherichia coli for the production of phenol from glucose

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Metabolic engineering of Escherichia coli for the production of polylactic acid and its copolymers

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Metabolic engineering of Escherichia coli for the production of putrescine: a four carbon diamine

scientific article published in November 2009

Metabolic engineering of Escherichia coli using synthetic small regulatory RNAs

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Metabolic engineering of Escherichia coli with electron channelling for the production of natural products

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Metabolic engineering of Mannheimia succiniciproducens for succinic acid production based on elementary mode analysis with clustering

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Metabolic engineering of Ralstonia eutropha for the biosynthesis of 2-hydroxyacid-containing polyhydroxyalkanoates

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Metabolic engineering of Ralstonia eutropha for the production of polyhydroxyalkanoates from sucrose

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Metabolic engineering of antibiotic factories: new tools for antibiotic production in actinomycetes

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Metabolic engineering of clostridia for the production of chemicals

Metabolic engineering of microorganisms for production of aromatic compounds

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Metabolic engineering of microorganisms for the production of L-arginine and its derivatives

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Metabolic engineering of microorganisms for the production of higher alcohols

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Metabolic engineering of microorganisms: general strategies and drug production

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Metabolic engineering of the genus Clostridium for butanol production

Metabolic engineering strategies toward production of biofuels

scientific article published on 13 April 2020

Metabolic engineering with systems biology tools to optimize production of prokaryotic secondary metabolites

scientific article published on 13 April 2016

Metabolic flux analysis and metabolic engineering of microorganisms

scientific article published on 16 October 2007

Metabolic flux analysis for succinic acid production by recombinant Escherichia coli with amplified malic enzyme activity

scientific article published in July 2001

Metabolic network modeling and simulation for drug targeting and discovery

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Metabolic pathways and fermentative production of L-aspartate family amino acids

scientific article published on June 2010

Metabolic profiling of Klebsiella oxytoca: evaluation of methods for extraction of intracellular metabolites using UPLC/Q-TOF-MS

scientific article published on 04 May 2012

Metabolite essentiality elucidates robustness of Escherichia coli metabolism

scholarly article

Metabolite-centric approaches for the discovery of antibacterials using genome-scale metabolic networks

scientific article published on 28 May 2009

Metabolomics for industrial fermentation

scientific article published on 09 June 2018

Microarray of DNA-protein complexes on poly-3-hydroxybutyrate surface for pathogen detection.

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Microarrays of peptides elevated on the protein layer for efficient protein kinase assay

scientific article published in July 2004

Microbial Polyhydroxyalkanoates and Nonnatural Polyesters

scientific article published on 06 April 2020

Microbial cell-surface display

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Microbial production of 2,3-butanediol for industrial applications

scientific article published on 29 August 2019

Microbial production of 4-amino-1-butanol, a four-carbon amino alcohol

scientific article published on 21 May 2020

Microbial production of building block chemicals and polymers

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Microbial production of butyl butyrate, a flavor and fragrance compound

scientific article published on 18 January 2019

Microbial production of fatty acids and derivative chemicals

scientific article published on 23 March 2020

Microbial production of lactate-containing polyesters

scientific article (publication date: November 2013)

Microbial production of methyl anthranilate, a grape flavor compound

scientific article published on 13 May 2019

Microbial production of short-chain alkanes

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Microbial small heat shock proteins and their use in biotechnology

scientific article published on 22 August 2008

Microcontact printing of biotin for selective immobilization of streptavidin-fused proteins and SPR analysis

Microfluidic cell disruption system employing a magnetically actuated diaphragm

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Micropatterning proteins on polyhydroxyalkanoate substrates by using the substrate binding domain as a fusion partner

scientific article published in October 2005

Micropatterns of Spores Displaying Heterologous Proteins [J. Am. Chem. Soc.2004,126, 10512−10513]

scientific article published in 2005

Micropatterns of spores displaying heterologous proteins

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Microwave-assisted synthesis of highly water-soluble graphene towards electrical DNA sensor

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Model based engineering of Pichia pastoris central metabolism enhances recombinant protein production

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Modeling of batch fermentation kinetics for succinic acid production by Mannheimia succiniciproducens

Modeling regulatory networks using machine learning for systems metabolic engineering

scientific article published on 14 April 2020

Molecular mass of poly[(R)-3-hydroxybutyric acid] produced in a recombinant Escherichia coli.

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Multi-product trade-off analysis of E. coli by multiobjective flux balance analysis

Multi-stage high cell continuous fermentation for high productivity and titer

scientific article published on 03 December 2010

Multiobjective flux balancing using the NISE method for metabolic network analysis

scientific article published in July 2009

Multiplex electrical detection of avian influenza and human immunodeficiency virus with an underlap-embedded silicon nanowire field-effect transistor

scientific article published on 12 December 2013

Multispot array combined with S1 nuclease-mediated elimination of unpaired nucleotides

Nanogap field-effect transistor biosensors for electrical detection of avian influenza.

scientific article

Nanowire FET Biosensors on a Bulk Silicon Substrate

Native-sized recombinant spider silk protein produced in metabolically engineered Escherichia coli results in a strong fiber

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New FadB homologous enzymes and their use in enhanced biosynthesis of medium-chain-length polyhydroxyalkanoates in FadB mutant Escherichia coli

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New time-scale criteria for model simplification of bio-reaction systems

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Novel cysteine-centered sulfur metabolic pathway in the thermotolerant methylotrophic yeast Hansenula polymorpha

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Novel gene members in the Pho regulon of Escherichia coli

scientific article published in November 2006

Occurrence, evolution, and functions of DNA phosphorothioate epigenetics in bacteria.

scientific article published on 12 March 2018

One hundred years of clostridial butanol fermentation

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One-step fermentative production of aromatic polyesters from glucose by metabolically engineered Escherichia coli strains

scientific article published on 8 January 2018

One-step fermentative production of poly(lactate-co-glycolate) from carbohydrates in Escherichia coli

scientific article published on 7 March 2016

Optical Biosensors for the Detection of Pathogenic Microorganisms

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Optimal production of poly-gamma-glutamic acid by metabolically engineered Escherichia coli

scientific article published in July 2006

Optimization and Scale-Up of Succinic Acid Production by Mannheimia succiniciproducens LPK7

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Organizational and mutational analysis of a complete FR-008/candicidin gene cluster encoding a structurally related polyene complex

scientific article

Parameter estimation and dynamic control analysis of central carbon metabolism in Escherichia coli

scholarly article by Wangyun Won et al published April 2011 in Biotechnology and Bioprocess Engineering

Patterned Multiplex Pathogen DNA Detection by Au Particle-on-Wire SERS Sensor

scientific article published on 01 April 2010

Patterning of biomolecules on a biocompatible nonchemically amplified resist

Phylogenetic analysis based on genome-scale metabolic pathway reaction content

scientific article published on 9 June 2004

Plasmonic properties of the multispot copper-capped nanoparticle array chip and its application to optical biosensors for pathogen detection of multiplex DNAs

scientific article published on 19 July 2011

Plastic bacteria? Progress and prospects for polyhydroxyalkanoate production in bacteria

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Poly(3-hydroxybutyrate) production from xylose by recombinant Escherichia coli

Poly-(3-hydroxybutyrate) production from whey by high-density cultivation of recombinant Escherichia coli

scientific article published on 01 July 1998

Polyhydroxyalkanoate chip for the specific immobilization of recombinant proteins and its applications in immunodiagnostics

scientific article published on 01 January 2006

Polyketide Bioderivatization Using the Promiscuous Acyltransferase KirCII.

scientific article published on 16 February 2017

Precisely Determining Ultralow level UO2(2+) in Natural Water with Plasmonic Nanowire Interstice Sensor

scientific article published on 21 January 2016

Prediction of metabolic fluxes by incorporating genomic context and flux-converging pattern analyses

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Prediction of novel synthetic pathways for the production of desired chemicals

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Preparation of alkyl (R)-(−)-3-hydroxybutyrate by acidic alcoholysis of poly-(R)-(−)-3-hydroxybutyrate

scientific article published on 01 July 2000

Probing the ArcA regulon in the rumen bacterium Mannheimia succiniciproducens by genome-wide expression profiling

scientific article published on 21 July 2012

Process analysis and economic evaluation for Poly(3-hydroxybutyrate) production by fermentation

Production and degradation of polyhydroxyalkanoates in waste environment

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Production of 4-hydroxybutyric acid by metabolically engineered Mannheimia succiniciproducens and its conversion to γ-butyrolactone by acid treatment

scientific article published on 17 September 2013

Production of 5-aminovaleric acid in recombinant Corynebacterium glutamicum strains from a Miscanthus hydrolysate solution prepared by a newly developed Miscanthus hydrolysis process

scientific article published on 21 May 2017

Production of Bacillus thuringiensis spores in total cell retention culture and two-stage continuous culture using an internal ceramic filter system

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Production of Carminic Acid by Metabolically Engineered <i>Escherichia coli</i>

scientific article published in 2021

Production of bulk chemicals via novel metabolic pathways in microorganisms

scientific article published on 29 December 2012

Production of ethylene glycol from xylose by metabolically engineered Escherichia coli

scholarly article by Tong Un Chae et al published 9 July 2018 in AIChE Journal

Production of medium-chain-length polyhydroxyalkanoates by high-cell-density cultivation of Pseudomonas putida under phosphorus limitation

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Production of poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) by high-cell-density cultivation of Aeromonas hydrophila

scientific article published on 01 January 2000

Production of poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) by metabolically engineered Escherichia coli strains

scientific article published in January 2001

Production of poly(3-hydroxybutyric-co-3-hydroxyvaleric acid) by fed-batch culture of Alcaligenes eutrophus with substrate control using on-line glucose analyzer

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Production of poly(beta-hydroxybutyric acid) by recombinant Escherichia coli.

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Production of poly-?-hydroxybutyrate by fed-batch culture of recombinantEscherichia coli

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Production of recombinant proteins by high cell density culture of Escherichia coli

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Production of succinic acid by bacterial fermentation

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Production of succinic acid by metabolically engineered microorganisms

scientific article published on 15 March 2016

Programmable peptide-directed two dimensional arrays of various nanoparticles on graphene sheets

scientific article published on 22 June 2011

Programmable polyketide biosynthesis platform for production of aromatic compounds in yeast

scientific article published on 23 January 2020

Propionyl-CoA dependent biosynthesis of 2-hydroxybutyrate containing polyhydroxyalkanoates in metabolically engineered Escherichia coli ⬇️

scientific article published on March 21, 2013

Prospects of microbial cell factories developed through systems metabolic engineering

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Protein nanopatterns and biosensors using gold binding polypeptide as a fusion partner

scientific article published in October 2006

Proteome profiling and its use in metabolic and cellular engineering

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Proteome-based identification of fusion partner for high-level extracellular production of recombinant proteins in Escherichia coli

scientific article published in October 2008

Proteome-based physiological analysis of the metabolically engineered succinic acid producer Mannheimia succiniciproducens LPK7.

scientific article

Proteome-level responses of Escherichia coli to long-chain fatty acids and use of fatty acid inducible promoter in protein production

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Proteomic Analysis of a Response to Long-Chain Fatty Acid in Escherichia coli and Its Application

scholarly article published 2007

Proteomic analyses of the phase transition from acidogenesis to solventogenesis using solventogenic and non-solventogenic Clostridium acetobutylicum strains

scientific article published on 18 April 2014

Protocols for RecET-based markerless gene knockout and integration to express heterologous biosynthetic gene clusters in Pseudomonas putida

scientific article published on 14 February 2019

Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing

scientific article published on 01 April 2020

Quantified High-Throughput Screening of Escherichia coli Producing Poly(3-hydroxybutyrate) Based on FACS ⬇️

scientific article published on June 6, 2013

Quantitative studies of carbohydrate-protein interaction using functionalized bacterial spores in solution and on chips

Rapid one-step inactivation of single or multiple genes in Escherichia coli

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Rapid separation of bacteriorhodopsin using a laminar-flow extraction system in a microfluidic device

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Rational Design ofEscherichia coliforl-Isoleucine Production ⬇️

scientific article published on September 17, 2012

Recent Advances in Biobutanol Production

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Recent Trends in Nanomaterials-Based Colorimetric Detection of Pathogenic Bacteria and Viruses

scientific article published on 08 March 2018

Recent advances in microbial production of fuels and chemicals using tools and strategies of systems metabolic engineering

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Recent advances in polyhydroxyalkanoate production by bacterial fermentation: mini-review

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Recent advances in production of recombinant spider silk proteins

scientific article published on 20 April 2012

Recent advances in reconstruction and applications of genome-scale metabolic models

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Recent advances in systems metabolic engineering tools and strategies

scientific article published on July 2017

Recent development of computational resources for new antibiotics discovery.

scientific article published on 16 November 2017

Recent trends in metabolic engineering of microorganisms for the production of advanced biofuels

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Recombinant as a biofactory for various single- and multi-element nanomaterials

article published in the Proceedings of the National Academy of Sciences of the United States of America

Reconstruction of genome-scale human metabolic models using omics data

scientific article

Recovery of succinic acid produced by fermentation of a metabolically engineered Mannheimia succiniciproducens strain

scientific article published on 10 July 2007

Redox-switch regulatory mechanism of thiolase from Clostridium acetobutylicum

scientific article

Regulatory analysis of amino acid synthesis pathway in Escherichia coli: aspartate family

Removal of bovine serum albumin using solid-phase extraction with in-situ polymerized stationary phase in a microfluidic device

scientific article published on 13 February 2008

Reply to "Conformational fitting of a flexible oligomeric substrate does not explain the enzymatic PET degradation"

scientific article published on 06 December 2019

Repurposing type III polyketide synthase as a malonyl-CoA biosensor for metabolic engineering in bacteria

article published in the Proceedings of the National Academy of Sciences of the United States of America

Revisiting Statistical Design and Analysis in Scientific Research

scientific article published on 06 September 2018

Roles and applications of small heat shock proteins in the production of recombinant proteins in Escherichia coli

scientific article published in November 2004

Secretory Production of Recombinant Protein by a High Cell Density Culture of a Protease Negative Mutant Escherichia coli Strain

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Secretory and extracellular production of recombinant proteins using Escherichia coli

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Secretory production of human granulocyte colony-stimulating factor in Escherichia coli

scientific article published in November 2001

Secretory production of human leptin in Escherichia coli

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Secretory production of therapeutic proteins in Escherichia coli

scientific article published in January 2005

Selective immobilization of fusion proteins on poly(hydroxyalkanoate) microbeads

scientific article published in September 2005

Separation and purification of three, four, and five carbon diamines from fermentation broth

scholarly article

Simple Patterning of Cells on a Biocompatible Nonchemically Amplified Resist

Simple micropatterning of biomolecules on a diazoketo-functionalized photoresist

Single Walled Carbon Nanotube-Based Electrical Biosensor for the Label-Free Detection of Pathogenic Bacteria

scientific article

Single-step multiplex detection of toxic metal ions by Au nanowires-on-chip sensor using reporter elimination ⬇️

scientific article published on June 22, 2012

Site-specific immobilization of gold binding polypeptide on gold nanoparticle-coated graphene sheet for biosensor application

scientific article published on 3 June 2011

Size analysis of poly(3-hydroxybutyric acid) granules produced in recombinant Escherichia coli

Solution chemistry of self-assembled graphene nanohybrids for high-performance flexible biosensors

scientific article published in May 2010

Special issue: bioenergy

scientific article

Stable and enhanced gene expression in Clostridium acetobutylicum using synthetic untranslated regions with a stem-loop

scientific article published on 14 May 2016

Stimulatory effects of amino acids and oleic acid on poly(3-hydroxybutyric acid) synthesis by recombinant Escherichia coli

Strategies for systems-level metabolic engineering

scientific article published on May 2008

Structural Insights into Polyhydroxyalkanoates Biosynthesis

scientific article published on 20 August 2018

Structural insight into molecular mechanism of poly(ethylene terephthalate) degradation

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Structure and function of the N-terminal domain of Ralstonia eutropha polyhydroxyalkanoate synthase, and the proposed structure and mechanisms of the whole enzyme

scientific article published on 3 November 2016

Substrate specificity and transglycosylation catalyzed by a thermostable beta-glucosidase from marine hyperthermophile Thermotoga neapolitana

scientific article published on 5 August 2005

Succinic acid production by Anaerobiospirillum succiniciproducens ATCC 29305 growing on galactose, galactose/glucose, and galactose/lactose

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Succinic acid production by Anaerobiospirillum succiniciproducens: effects of the H2/CO2 supply and glucose concentration

Succinic acid production from continuous fermentation process using Mannheimia succiniciproducens LPK7.

scientific article published in May 2008

Surface display of recombinant proteins on Escherichia coli by BclA exosporium of Bacillus anthracis

scientific article published on 22 September 2013

Surface engineering for enhancement of sensitivity in an underlap-FET biosensor by control of wettability

scientific article published on 25 August 2012

Surrogate strains of human pathogens for field release

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Synthesis of poly-(3-hydroxybutyrate-co-3-hydroxyvalerate) by recombinant Escherichia coli

scientific article published in March 1996

Synthesis, Characterization, and Application of Fully Biobased and Biodegradable Nylon-4,4 and -5,4

scientific article published in 2020

Synthetic Biology for Natural Compounds

scientific article published on 12 June 2018

Synthetic biology and metabolic engineering of actinomycetes for natural product discovery

scientific article published on 07 March 2019

Systematic and Comparative Evaluation of Software Programs for Template-Based Modeling of Protein Structures

scientific article published on 04 March 2020

Systematic engineering of TCA cycle for optimal production of a four-carbon platform chemical 4-hydroxybutyric acid in Escherichia coli

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Systematic strategies for developing phage resistant Escherichia coli strains

scientific article published in 2022

Systems Biological Approach for the Production of Various Polyhydroxyalkanoates by Metabolically EngineeredEscherichia coli

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Systems Biotechnology: a New Paradigm in Biotechnology Development

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Systems Metabolic Engineering

Systems Metabolic Engineering Strategies for Non-Natural Microbial Polyester Production

scientific article published on 12 April 2019

Systems Metabolic Engineering Strategies: Integrating Systems and Synthetic Biology with Metabolic Engineering

scientific article published on 05 February 2019

Systems Metabolic Engineering of E. coli

Systems Metabolic Engineering of Escherichia coli

scientific article published on May 2016

Systems Metabolic Engineering of Escherichia coli

scientific article published on March 2017

Systems Metabolic Engineering of Escherichia coli for Chemicals, Materials, Biofuels, and Pharmaceuticals

scholarly article published 2012

Systems approach to characterize the metabolism of liver cancer stem cells expressing CD133.

scientific article published on 03 April 2017

Systems biology and biotechnology of Streptomyces species for the production of secondary metabolites

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Systems biology as a foundation for genome-scale synthetic biology

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Systems biology: the ‘new biotechnology’

scientific article published on 19 April 2012

Systems biotechnology for strain improvement

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Systems metabolic engineering as an enabling technology in accomplishing sustainable development goals

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Systems metabolic engineering for chemicals and materials ⬇️

scientific article published on May 10, 2011

Systems metabolic engineering of Escherichia coli for L-threonine production

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Systems metabolic engineering of microorganisms for natural and non-natural chemicals

scientific article published on 17 May 2012

Systems metabolic engineering, industrial biotechnology and microbial cell factories ⬇️

scientific article published on December 11, 2012

Systems strategies for developing industrial microbial strains

scientific article published on October 2015

Systems-level analysis of genome-scalein silico metabolic models using MetaFluxNet

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Tailor-made type II Pseudomonas PHA synthases and their use for the biosynthesis of polylactic acid and its copolymer in recombinant Escherichia coli

scientific article published on 11 January 2011

The CpxRA two-component system is involved in the maintenance of the integrity of the cell envelope in the rumen bacterium Mannheimia succiniciproducens.

scientific article published on 18 September 2014

The Effect of Network Density on the DNA-Sensing Performance of Single-Walled Carbon Nanotubes

The Escherichia coli proteome: past, present, and future prospects

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The antiSMASH database version 2: a comprehensive resource on secondary metabolite biosynthetic gene clusters

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The antiSMASH database, a comprehensive database of microbial secondary metabolite biosynthetic gene clusters

scientific article published on 24 October 2016

The effect of protectants and pH changes on the cellular growth and succinic acid yield of Mannheimia succiniciproducens LPK7

scientific article published on December 1, 2010

The extracellular proteomes of Escherichia coli B and K-12 strains and its application in the secretory production of recombinant proteins

scientific article published in 2008

The genome sequence of E. coli W (ATCC 9637): comparative genome analysis and an improved genome-scale reconstruction of E. coli

scientific article

The genome sequence of the capnophilic rumen bacterium Mannheimia succiniciproducens

scientific article

The genome-scale metabolic network analysis of Zymomonas mobilis ZM4 explains physiological features and suggests ethanol and succinic acid production strategies

scientific article

The proteome of Mannheimia succiniciproducens, a capnophilic rumen bacterium

scientific article published in June 2006

The urgent need for microbiology literacy in society

scientific article published on 11 April 2019

Tools and strategies of systems metabolic engineering for the development of microbial cell factories for chemical production

scientific article published on 22 June 2020

Toward Systems Metabolic Engineering of Streptomycetes for Secondary Metabolites Production

scientific article published on 27 October 2017

Towards systems metabolic engineering of microorganisms for amino acid production

scientific article published on 06 September 2008

Transcript and protein level analyses of the interactions among PhoB, PhoR, PhoU and CreC in response to phosphate starvation in Escherichia coli

scientific article published in December 2007

Transcriptome and proteome analyses of adaptive responses to methyl methanesulfonate in Escherichia coli K-12 and ada mutant strains

scientific article

Transcriptomic analysis of Corynebacterium glutamicum in the response to the toxicity of furfural present in lignocellulosic hydrolysates

article

Tunable Gene Expression System Independent of Downstream Coding Sequence

scientific article published on 14 October 2020

Understanding and engineering of microbial cells based on proteomics and its conjunction with other omics studies

scientific article published on 13 January 2011

Vector construction, transformation, and gene amplification in Clostridium acetobutylicum ATCC 824.

scientific article published in October 1992

WebCell: a web-based environment for kinetic modeling and dynamic simulation of cellular networks

scientific article published on 16 March 2006

antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters

scientific article published on 6 May 2015

antiSMASH 4.0-improvements in chemistry prediction and gene cluster boundary identification

scientific article published on 28 April 2017

antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline

scientific article published on 01 July 2019

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