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List of works by Eric Altermann

A comparison of analog and Next-Generation transcriptomic tools for mammalian studies.

scientific article published on 09 March 2011

Analysis of the genome sequence of Lactobacillus gasseri ATCC 33323 reveals the molecular basis of an autochthonous intestinal organism

scientific article

Chromosomal tet(O)-harboring regions in Campylobacter coli isolates from turkeys and swine

scientific article published on 28 September 2012

Comparative genomics and transcriptional analysis of prophages identified in the genomes of Lactobacillus gasseri, Lactobacillus salivarius, and Lactobacillus casei

scientific article

Comparative genomics of the lactic acid bacteria

scientific article

Complete Annotated Genome Sequence of Limosilactobacillus fermentum AGR1487

scientific article published on 07 January 2021

Complete Genome Sequence of Methanogenic Archaeon ISO4-G1, a Member of the Methanomassiliicoccales, Isolated from a Sheep Rumen.

scientific article

Complete Genome Sequences of Three Novel Pseudomonas fluorescens SBW25 Bacteriophages, Noxifer, Phabio, and Skulduggery

scientific article

Complete genome sequence of the probiotic lactic acid bacterium Lactobacillus acidophilus NCFM

scientific article

Draft Genome Sequence of Lactobacillus animalis 381-IL-28.

scientific article

Draft Genome Sequence of Lactococcus lactis subsp. cremoris HPT, the First Defined-Strain Dairy Starter Culture Bacterium.

scientific article published on 6 March 2014

Draft Genome Sequence of the Pediocin-Encoding Biopreservative and Biocontrol Strain Pediococcus acidilactici D3.

scientific article published on 20 June 2013

Draft Genome Sequence of the Rumen Methanogen Methanobrevibacter olleyae YLM1.

scientific article

Draft Genome Sequences of Two Historical Listeria monocytogenes Strains from Human Listeriosis Cases in 1933.

scientific article published on 08 December 2016

Epidemic clone I-specific genetic markers in strains of Listeria monocytogenes serotype 4b from foods

scientific article published on July 2004

Evaluation of Lactococcus lactis Isolates from Nondairy Sources with Potential Dairy Applications Reveals Extensive Phenotype-Genotype Disparity and Implications for a Revised Species

scientific article published on 3 April 2015

Functional analysis of putative adhesion factors in Lactobacillus acidophilus NCFM.

scientific article

Functional and comparative genomic analyses of an operon involved in fructooligosaccharide utilization by Lactobacillus acidophilus

scientific article

GAMOLA2, a Comprehensive Software Package for the Annotation and Curation of Draft and Complete Microbial Genomes

scientific article published on 23 March 2017

GAMOLA: A New Local Solution for Sequence Annotation and Analyzing Draft and Finished Prokaryotic Genomes ⬇️

scientific article published on January 1, 2003

Genetic markers unique to Listeria monocytogenes serotype 4b differentiate epidemic clone II (hot dog outbreak strains) from other lineages

scientific article published on April 2004

Genome Sequences of Listeria monocytogenes Strains with Resistance to Arsenic

scientific article

Genome Sequences of Potential Probiotic Lactobacillus rhamnosus Isolates from Human Infants

scientific article published on 6 April 2017

Genome sequencing of rumen bacteria and archaea and its application to methane mitigation strategies

scientific article published on June 2013

Genomic analysis of three Bifidobacterium species isolated from the calf gastrointestinal tract

scientific article

Genomic features of lactic acid bacteria effecting bioprocessing and health

scientific article

Group-specific comparison of four lactobacilli isolated from human sources using differential blast analysis

scientific article published on 28 October 2010

Identification and inactivation of genetic loci involved with Lactobacillus acidophilus acid tolerance

scientific article published on September 2004

Identification and phenotypic characterization of the cell-division protein CdpA.

scientific article published in November 2004

Identification of a Campylobacter coli methyltransferase targeting adenines at GATC sites.

scientific article published on 2 December 2016

Invited commentary: lubricating the rusty wheel, new insights into iron oxidizing bacteria through comparative genomics

scientific article

Isolation and characterization of a Lactobacillus plantarum bacteriophage, phiJL-1, from a cucumber fermentation

scientific article published in July 2003

Lactobacillus fermentum AGR1487 cell surface structures and supernatant increase paracellular permeability through different pathways

scientific article

Live Faecalibacterium prausnitzii induces greater TLR2 and TLR2/6 activation than the dead bacterium in an apical anaerobic co-culture system

scientific article published on 7 November 2017

Mathematical modelling supports the existence of a threshold hydrogen concentration and media-dependent yields in the growth of a reductive acetogen

scientific article published on 25 January 2020

Metasecretome-selective phage display approach for mining the functional potential of a rumen microbial community

scientific article

Microarray analysis of a two-component regulatory system involved in acid resistance and proteolytic activity in Lactobacillus acidophilus

scientific article

Novel plasmid conferring kanamycin and tetracycline resistance in the turkey-derived Campylobacter jejuni strain 11601MD.

scientific article published on 4 June 2016

PathwayVoyager: pathway mapping using the Kyoto Encyclopedia of Genes and Genomes (KEGG) database

scientific article

Phylogenetic evidence for lateral gene transfer in the intestine of marine iguanas

scientific article

Primary structure and features of the genome of the Lactobacillus gasseri temperate bacteriophage (phi)adh

scientific article published in August 1999

S layer protein A of Lactobacillus acidophilus NCFM regulates immature dendritic cell and T cell functions

scholarly article

Sequence analysis of Leuconostoc mesenteroides bacteriophage Phi1-A4 isolated from an industrial vegetable fermentation.

scientific article

Sequence analysis of plasmid pIR52-1 from Lactobacillus helveticus R0052 and investigation of its origin of replication

scientific article

Sequence analysis of the Lactobacillus plantarum bacteriophage PhiJL-1.

scientific article

Specialized adaptation of a lactic acid bacterium to the milk environment: the comparative genomics of Streptococcus thermophilus LMD-9.

scientific article published on 30 August 2011

Strategies to reduce methane emissions from farmed ruminants grazing on pasture

scientific article published on 26 March 2010

Structure of a genome region of the Lactobacillus gasseri temperate phage phiadh covering a repressor gene and cognate promoters

scientific article published on March 1998

The Complete Genome Sequence of Methanobrevibacter sp. AbM4

scientific article published on 25 May 2013

The Draft Genome Sequence of the Yersinia entomophaga Entomopathogenic Type Strain MH96T.

scientific article

The complete genome sequence of Eubacterium limosum SA11, a metabolically versatile rumen acetogen.

scientific article published on 15 March 2016

The complete genome sequence of the methanogenic archaeon ISO4-H5 provides insights into the methylotrophic lifestyle of a ruminal representative of the Methanomassiliicoccales.

scientific article published on 6 September 2016

The complete genome sequence of the rumen bacterium Butyrivibrio hungatei MB2003.

scientific article

The complete genome sequence of the rumen methanogen Methanobacterium formicicum BRM9

scientific article

The complete genome sequence of the rumen methanogen Methanobrevibacter millerae SM9.

scientific article published on 17 August 2016

The complete genome sequence of the rumen methanogen Methanosarcina barkeri CM1

scientific article published on 19 August 2015

The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533

scientific article

The genome sequence of the rumen methanogen Methanobrevibacter ruminantium reveals new possibilities for controlling ruminant methane emissions

scientific article

The glycobiome of the rumen bacterium Butyrivibrio proteoclasticus B316(T) highlights adaptation to a polysaccharide-rich environment

scientific article

The large episomes of Butyrivibrio proteoclasticus B316T have arisen through intragenomic gene shuttling from the chromosome to smaller Butyrivibrio-specific plasmids

article

The role of cell surface architecture of lactobacilli in host-microbe interactions in the gastrointestinal tract.

scientific article published on 13 March 2013

Toward Understanding Phage:Host Interactions in the Rumen; Complete Genome Sequences of Lytic Phages Infecting Rumen Bacteria.

scientific article published on 5 December 2017

Tracing Lifestyle Adaptation in Prokaryotic Genomes ⬇️

scientific article published on February 21, 2012

Transcript map of the temperate Lactobacillus gasseri bacteriophage ϕadh ⬇️

scholarly article by E. Altermann published 1 October 2003 in Microbiology

Transposition of Tn916 in the four replicons of the Butyrivibrio proteoclasticus B316(T) genome.

scientific article published on 18 January 2011

Whole-Genome Sequences of Agricultural, Host-Associated Campylobacter coli and Campylobacter jejuni Strains.

scientific article published on 18 August 2016

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