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List of works by Karthik Raman

A General Mechanism for the Propagation of Mutational Effects in Proteins

scientific article published on 13 December 2016

A systems perspective of host–pathogen interactions: predicting disease outcome in tuberculosis

scientific article published on 14 December 2009

Computational Prediction of Synthetic Lethals in Genome-Scale Metabolic Models Using Fast-SL.

scientific article published in January 2018

Construction and analysis of protein-protein interaction networks

scientific article

Critical assessment of genome-scale metabolic networks: the need for a unified standard.

scientific article published on 28 February 2015

Deciphering the metabolic capabilities of Bifidobacteria using genome-scale metabolic models

scientific article published on 03 December 2019

Discovering adaptation-capable biological network structures using control-theoretic approaches

scientific article published on 21 January 2022

Discovering design principles for biological functionalities: Perspectives from systems biology

scientific article published in 2022

Elucidating the biosynthetic pathways of volatile organic compounds in Mycobacterium tuberculosis through a computational approach

scientific article published on 22 February 2017

Enumerating all possible biosynthetic pathways in metabolic networks.

scientific article published on 2 July 2018

Evolutionary design principles in metabolism

scientific article published on 01 March 2019

Evolvability and robustness in a complex signalling circuit

scientific article published on 11 January 2011

Fast-SL: an efficient algorithm to identify synthetic lethal sets in metabolic networks ⬇️

scientific article

Flux balance analysis of biological systems: applications and challenges.

scientific article published on 15 March 2009

Flux balance analysis of mycolic acid pathway: targets for anti-tubercular drugs

scientific article

Hallmarks of mycolic acid biosynthesis: a comparative genomics study.

scientific article

Identification of putative and potential cross-reactive chickpea (Cicer arietinum) allergens through an in silico approach.

scientific article

Machine Learning Applications for Mass Spectrometry-Based Metabolomics

scientific article published on 13 June 2020

Metagenome-wide association analysis identifies microbial determinants of post-antibiotic ecological recovery in the gut

scientific article published on 06 July 2020

Mycobacterium tuberculosis (Mtb) lipid-mediated lysosomal rewiring in infected macrophages modulates intracellular Mtb trafficking and survival

scientific article published on 18 May 2020

Mycobacterium tuberculosis interactome analysis unravels potential pathways to drug resistance

scientific article

Network-based features enable prediction of essential genes across diverse organisms

scientific article published in PLoS ONE

Predicting Novel Metabolic Pathways through Subgraph Mining

scientific article published on 27 July 2017

Revisiting robustness and evolvability: evolution in weighted genotype spaces

scientific article

SBML Level 3: an extensible format for the exchange and reuse of biological models

scientific article published on 01 August 2020

Strategies for efficient disruption of metabolism in Mycobacterium tuberculosis from network analysis.

scientific article published in December 2009

The evolvability of programmable hardware

scientific article

The organisational structure of protein networks: revisiting the centrality-lethality hypothesis

scientific article published on 27 August 2013

targetTB: a target identification pipeline for Mycobacterium tuberculosis through an interactome, reactome and genome-scale structural analysis

scientific article

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