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List of works by Miguel Carneiro

A comparison of brain gene expression levels in domesticated and wild animals

scientific article (publication date: September 2012)

A genetic mechanism for sexual dichromatism in birds

scientific article published on 01 June 2020

A genomic map of clinal variation across the European rabbit hybrid zone

scientific article published on 23 January 2018

A loss-of-function mutation in RORB disrupts saltatorial locomotion in rabbits

scientific article published in March 2021

A mechanism for red coloration in vertebrates

scholarly article

A molecular mechanism for bright color variation in parrots

scientific article published in November 2024

A non-coding region near controls head colour polymorphism in the Gouldian finch

scientific article published on 3 October 2018

A prominent role of KRAB-ZNF transcription factors in mammalian speciation?

scientific article published on 17 December 2012

A single introduction of wild rabbits triggered the biological invasion of Australia

scientific article published on 22 August 2022

Candidate genes underlying heritable differences in reproductive seasonality between wild and domestic rabbits

scientific article

Colonization history of Mallorca Island by the European rabbit,Oryctolagus cuniculus, and the Iberian hare,Lepus granatensis(Lagomorpha: Leporidae)

De novo transcriptome assembly and polymorphism detection in two highly divergent evolutionary units of Bosca's newt (Lissotriton boscai) endemic to the Iberian Peninsula

scientific article published on 29 July 2016

Detection of positive selection in the major capsid protein VP60 of the rabbit haemorrhagic disease virus (RHDV).

scientific article

Diversity and evolutionary history of the MHC DQA gene in leporids

article

Dwarfism and Altered Craniofacial Development in Rabbits Is Caused by a 12.1 kb Deletion at the HMGA2 Locus.

scientific article

Elevated Proportions of Deleterious Genetic Variation in Domestic Animals and Plants

scientific article published on 9 January 2018

Evidence for widespread positive and purifying selection across the European rabbit (Oryctolagus cuniculus) genome

scientific article

Extensive intragenic recombination and patterns of linkage disequilibrium at the CSN3 locus in European rabbit

scientific article published on 14 April 2007

Feasibility of applying shotgun metagenomic analyses to grapevine leaf, rhizosphere and soil microbiome characterisation

scientific article published on 21 June 2021

Genetic Basis for Red Coloration in Birds.

scientific article published on 18 May 2016

Identifying loci under selection against gene flow in isolation-with-migration models

scientific article published on 2 March 2013

Improving amphibian genomic resources: a multi-tissue reference transcriptome of an iconic invader ⬇️

scientific article

Levels and Patterns of Genetic Diversity and Population Structure in Domestic Rabbits

scientific article published on 21 December 2015

Maximum likelihood approach suggests positive selection in platelet integrin αIIbβ3 in mammalian species

scientific article published on 4 April 2018

Molecular parallelisms between pigmentation in the avian iris and the integument of ectothermic vertebrates

scientific article published on 23 February 2021

Parallel adaptation of rabbit populations to myxoma virus

scientific article published on 14 February 2019

Pervasive hybridization with local wild relatives in Western European grapevine varieties

scientific article published on 19 November 2021

Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication

scientific article

Recombination and speciation: loci near centromeres are more differentiated than loci near telomeres between subspecies of the European rabbit (Oryctolagus cuniculus).

scientific article

Recurrent introgression of mitochondrial DNA among hares (Lepus spp.) revealed by species-tree inference and coalescent simulations.

scientific article

Reduced introgression of the Y chromosome between subspecies of the European rabbit (Oryctolagus cuniculus) in the Iberian Peninsula

scientific article published on 01 October 2008

Reference-free population genomics from next-generation transcriptome data and the vertebrate-invertebrate gap

scientific article (publication date: April 2013)

Revisiting the Iberian honey bee (Apis mellifera iberiensis) contact zone: maternal and genome-wide nuclear variations provide support for secondary contact from historical refugia.

scientific article published on June 2015

Speciation in the European rabbit (Oryctolagus cuniculus): islands of differentiation on the X chromosome and autosomes

scientific article

Steep clines within a highly permeable genome across a hybrid zone between two subspecies of the European rabbit

scientific article published on 26 March 2013

The genetic structure of domestic rabbits

scientific article published on 07 January 2011

The genomic architecture of population divergence between subspecies of the European rabbit

scientific article

The phylogeny of pikas (Ochotona) inferred from a multilocus coalescent approach

scientific article published on 28 January 2015

Transcriptome-wide patterns of divergence during allopatric evolution.

scientific article published on 09 February 2016

Unleashing the Potential of Public Genomic Resources to Find Parasite Genetic Data

scientific article published on 14 July 2017

Whole Genome Sequencing and Re-sequencing of the Sable Antelope (Hippotragus niger): A Resource for Monitoring Diversity in ex Situ and in Situ Populations

scientific article published on 05 June 2019

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