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List of works by Carl J Schmidt

Accurate sequencing by hybridization for DNA diagnostics and individual genomics

article

Analysis of G-protein alpha and beta gamma subunits by in vitro translation

scientific article published in January 1994

Cell specificity and an effect of ras on human metallothionein gene expression

scientific article published on May 1986

Characterization of vnr-13, the first alphaherpesvirus gene of the bcl-2 family

scientific article published on November 2003

Chicken hepatic response to chronic heat stress using integrated transcriptome and metabolome analysis.

scientific article published on 31 July 2017

Cloning and sequence analysis of two monkey metallothionein cDNAs

scientific article published in September 1983

Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project

scientific article

Detection of Selection Signatures Among Brazilian, Sri Lankan, and Egyptian Chicken Populations Under Different Environmental Conditions

article

Distinct functional responses to stressors of bone marrow derived dendritic cells from diverse inbred chicken lines.

scientific article

Distinct genes and pathways associated with transcriptome differences in early cardiac development between fast- and slow-growing broilers

scientific article published in PLoS ONE

Duplicated heavy metal control sequences of the mouse metallothionein-I gene

scientific article

Evidence and role of phlebitis and lipid infiltration in the onset and pathogenesis of Wooden Breast Disease in modern broiler chickens

scientific article published on 13 June 2017

FAANG, establishing metadata standards, validation and best practices for the farmed and companion animal community

scientific article published on 12 October 2018

GO-FAANG meeting: a Gathering On Functional Annotation of Animal Genomes

scientific article published on 24 July 2016

Gallus GBrowse: a unified genomic database for the chicken

scientific article

Gene expression analysis of Salmonella enterica Enteritidis Nal(R) and Salmonella enterica Kentucky 3795 exposed to HCl and acetic acid in rich medium

scientific article

Genetic analysis of production, physiological, and egg quality traits in heat-challenged commercial white egg-laying hens using 600k SNP array data

scientific article published on 25 June 2019

Genomic Comparison of Indigenous African and Northern European Chickens Reveals Putative Mechanisms of Stress Tolerance Related to Environmental Selection Pressure

scientific article

Genomic analysis of Ugandan and Rwandan chicken ecotypes using a 600 k genotyping array.

scientific article

GoFigure: automated Gene Ontology annotation

scientific article published on December 2003

Heat Stress and Lipopolysaccharide Stimulation of Chicken Macrophage-Like Cell Line Activates Expression of Distinct Sets of Genes

scientific article

Herpesvirus of turkeys: microarray analysis of host gene responses to infection

article

Identification of quantitative trait loci for body temperature, body weight, breast yield, and digestibility in an advanced intercross line of chickens under heat stress

scientific article

Identifying mechanisms of regulation to model carbon flux during heat stress and generate testable hypotheses

scientific article published in PLoS ONE

Immunomodulatory effects of heat stress and lipopolysaccharide on the bursal transcriptome in two distinct chicken lines

scientific article published on 30 August 2018

Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats

scientific article published in April 2014

Liver transcriptome response to hyperthermic stress in three distinct chicken lines

scientific article

Marek's disease virus VP22: subcellular localization and characterization of carboxyl terminal deletion Mutations

scientific article published in January 2002

Mining gene-related information from biomedical literature

article

Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis

scientific article published in 2010

Myosin I heavy-chain genes of Acanthamoeba castellanii: cloning of a second gene and evidence for the existence of a third isoform

scientific article published in October 1989

Natural Selection Footprints Among African Chicken Breeds and Village Ecotypes

scientific article published on 08 May 2019

Neuronal expression of a newly identified Drosophila melanogaster G protein alpha 0 subunit

scientific article

Nuclear localization and dynamic properties of the Marek's disease virus oncogene products Meq and Meq/vIL8.

scientific article published in February 2006

PathRings: a web-based tool for exploration of ortholog and expression data in biological pathways

scientific article

Pathway curation: Application of text-mining tools eGIFT and RLIMS-P

Quantitative trait loci identified for blood chemistry components of an advanced intercross line of chickens under heat stress.

scientific article

RNA-seq analysis of broiler liver transcriptome reveals novel responses to high ambient temperature

scientific article

Resources and Recommendations for Using Transcriptomics to Address Grand Challenges in Comparative Biology.

scientific article published on 17 September 2016

Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes

scientific article

Single nucleotide variant discovery of highly inbred Leghorn and Fayoumi chicken breeds using pooled whole genome resequencing data reveals insights into phenotype differences

scientific article

Structure and expression of two human metallothionein-I isoform genes and a related pseudogene

scientific article (publication date: 25 June 1985)

The Chicken Gene Nomenclature Committee report

scientific article

The ancient regulatory-protein family of WD-repeat proteins

scientific article

Third Report on Chicken Genes and Chromosomes 2015.

scientific article published on 14 July 2015

Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs

scientific article

Time-resolved fluorescence of the two tryptophans in horse liver alcohol dehydrogenase.

scientific article published in July 1981

TransAtlasDB: an integrated database connecting expression data, metadata and variants.

scientific article

Transcriptome analysis of post-hatch breast muscle in legacy and modern broiler chickens reveals enrichment of several regulators of myogenic growth

scientific article

Transcriptome analysis reveals potential mechanisms underlying differential heart development in fast- and slow-growing broilers under heat stress

scientific article

Transcriptome response to heat stress in a chicken hepatocellular carcinoma cell line

scientific article

Transcriptomic changes throughout post-hatch development in Gallus gallus pituitary.

scientific article

Understanding the liver under heat stress with statistical learning: an integrated metabolomics and transcriptomics computational approach.

scientific article published on 17 June 2019

Unique genetic responses revealed in RNA-seq of the spleen of chickens stimulated with lipopolysaccharide and short-term heat.

scientific article

Variant analysis pipeline for accurate detection of genomic variants from transcriptome sequencing data

scientific article published on 23 September 2019

Venous blood gas and chemistry components are moderately heritable in commercial white egg-laying hens under acute or chronic heat exposure

scientific article published on 01 September 2019

WebGIVI: a web-based gene enrichment analysis and visualization tool.

scientific article

eGIFT: mining gene information from the literature

scientific article

miRiaD: A Text Mining Tool for Detecting Associations of microRNAs with Diseases

scientific article published on 29 April 2016

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