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List of works by Venkat S Malladi

A Cellular Anatomy of the Normal Adult Human Prostate and Prostatic Urethra.

scientific article

A comparative encyclopedia of DNA elements in the mouse genome

scientific article

Activation of PARP-1 by snoRNAs Controls Ribosome Biogenesis and Cell Growth via the RNA Helicase DDX21

scientific article published on 24 July 2019

Acute interstitial nephritis, a potential predictor of response to immune checkpoint inhibitors in renal cell carcinoma

scientific article published on 01 October 2020

An encyclopedia of mouse DNA elements (Mouse ENCODE).

scientific article

Analysis of forensic SNPs in the canine mtDNA HV1 mutational hotspot region

scientific article published on 18 September 2008

Association between hybrid status and reproductive success of captive male and female rhesus macaques (Macaca mulatta) at the California National Primate Research Center (CNPRC).

scientific article published on 23 March 2011

Canine population data generated from a multiplex STR kit for use in forensic casework

scientific article

Cardiac Reprogramming Factors Synergistically Activate Genome-wide Cardiogenic Stage-Specific Enhancers

scientific article published on 09 May 2019

Computational Approaches for Mining GRO-Seq Data to Identify and Characterize Active Enhancers

scientific article

Decoding Human Genome Regulatory Features That Influence HIV-1 Proviral Expression and Fate Through an Integrated Genomics Approach

scientific article published on 26 February 2022

Detecting signatures of inter-regional and inter-specific hybridization among the Chinese rhesus macaque specific pathogen-free (SPF) population using single nucleotide polymorphic (SNP) markers

scientific article (publication date: August 2010)

Development of a Chinese-Indian hybrid (Chindian) rhesus macaque colony at the California National Primate Research Center by introgression

scientific article published on 18 August 2008

Dynamic Change of Transcription Pausing through Modulating NELF Protein Stability Regulates Granulocytic Differentiation

scientific article published on 01 August 2017

ENCODE data at the ENCODE portal

scientific article

ENCODE data in the UCSC Genome Browser: year 5 update

scientific article

ENCODE whole-genome data in the UCSC Genome Browser: update 2012.

scientific article

ENCODE whole-genome data in the UCSC genome browser (2011 update)

scientific article

Enhancer transcription reveals subtype-specific gene expression programs controlling breast cancer pathogenesis.

scientific article published on 22 December 2017

Forensic utility of the mitochondrial hypervariable region 1 of domestic dogs, in conjunction with breed and geographic information.

scientific article published in January 2008

High-Phosphate Diet Induces Exercise Intolerance and Impairs Fatty Acid Metabolism in Mice

scientific article published on 01 March 2019

Histone modification profiling in breast cancer cell lines highlights commonalities and differences among subtypes

scientific article published on 20 February 2018

Human pancreatic cancer cell exosomes, but not human normal cell exosomes, act as an initiator in cell transformation

scientific article published on 28 May 2019

Identification and characterization of an alternative cancer-derived PD-L1 splice variant

scientific article published on 18 December 2018

Identification of a multipotent Twist2-expressing cell population in the adult heart

scientific article published on 20 August 2018

Ontology application and use at the ENCODE DCC

scientific article

Open collaborative writing with Manubot

scientific article published in June 2019

Perivascular mesenchymal cells control adipose-tissue macrophage accrual in obesity

scientific article published on 02 November 2020

Principles of metadata organization at the ENCODE data coordination center.

scientific article

Pyrosequencing as a method for SNP identification in the rhesus macaque (Macaca mulatta).

scientific article

SnoVault and encodeD: A novel object-based storage system and applications to ENCODE metadata

Suppression of Myeloid Cell Arginase Activity leads to Therapeutic Response in a NSCLC Mouse Model by Activating Anti-Tumor Immunity

scientific article published on 06 February 2019

The UCSC Genome Browser database: extensions and updates 2011.

scientific article

The UCSC Genome Browser database: extensions and updates 2013.

scientific article

The effect of SNP discovery method and sample size on estimation of population genetic data for Chinese and Indian rhesus macaques (Macaca mulatta).

scientific article

Total Functional Score of Enhancer Elements Identifies Lineage-Specific Enhancers That Drive Differentiation of Pancreatic Cells

scientific article published on 01 July 2020

Transcription pausing regulates mouse embryonic stem cell differentiation

scientific article published on 16 November 2017

Twist2 amplification in rhabdomyosarcoma represses myogenesis and promotes oncogenesis by redirecting MyoD DNA binding

scientific article published on 11 April 2019

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