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List of works by Laura Clarke

A standard nomenclature for referencing and authentication of pluripotent stem cells

scientific article published in January 2018

Alignment of 1000 Genomes Project Reads to Reference Assembly GRCh38.

scientific article

An evaluation of sequencing coverage and genotyping strategies to assess neutral and adaptive diversity

scientific article published on 09 September 2019

An integrated map of structural variation in 2,504 human genomes

scientific article

An overview of Ensembl

scientific article (publication date: May 2004)

Association analyses of 249,796 individuals reveal 18 new loci associated with body mass index

scientific article (publication date: November 2010)

Biopipe: a flexible framework for protocol-based bioinformatics analysis

scientific article

Chromatin-Based Classification of Genetically Heterogeneous AMLs into Two Distinct Subtypes with Diverse Stemness Phenotypes

scientific article published on 01 January 2019

Common genetic variation drives molecular heterogeneity in human iPSCs

scientific article published on 10 May 2017

Comparative analysis of neutrophil and monocyte epigenomes

Convergent genomic signatures of domestication in sheep and goats

scientific article published on 6 March 2018

Coordinated international action to accelerate genome-to-phenome with FAANG, the Functional Annotation of Animal Genomes project

scientific article

Corrigendum: Common genetic variation drives molecular heterogeneity in human iPSCs

scientific article published in Nature

Distinct Trends of DNA Methylation Patterning in the Innate and Adaptive Immune Systems

scientific article published in November 2016

Dynamics of Transcription Regulation in Human Bone Marrow Myeloid Differentiation to Mature Blood Neutrophils

scientific article published on 01 September 2018

Ensembl 2004

scientific article (publication date: 2004)

Ensembl 2005

scientific article

Ensembl 2006.

scientific article

Ensembl 2009

scientific article (publication date: 2009)

Epigenomic and functional dynamics of human bone marrow myeloid differentiation to mature blood neutrophils

European Nucleotide Archive in 2016

scientific article

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

scientific article

Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

scientific article

Expression Atlas update: gene and protein expression in multiple species

scientific article published on 19 November 2021

FAANG, establishing metadata standards, validation and best practices for the farmed and companion animal community

scientific article published on 12 October 2018

Functional variation in allelic methylomes underscores a strong genetic contribution and reveals novel epigenetic alterations in the human epigenome

scientific article published on 10 March 2017

GO-FAANG meeting: a Gathering On Functional Annotation of Animal Genomes

scientific article published on 24 July 2016

Genetic Drivers of Epigenetic and Transcriptional Variation in Human Immune Cells

scientific article

Genome analysis of the platypus reveals unique signatures of evolution

scientific article

Genome analysis of the platypus reveals unique signatures of evolution

scientific article published in Nature

Genome sequence of the Brown Norway rat yields insights into mammalian evolution

scientific article

Genome-wide association study identifies eight loci associated with blood pressure

scientific article (publication date: June 2009)

Guidelines for reporting single-cell RNA-seq experiments

scientific article published on 13 November 2020

Increased DNA methylation variability in type 1 diabetes across three immune effector cell types.

scientific article

Integrative annotation of variants from 1092 humans: application to cancer genomics

scientific article

Multi-omics profiling reveals a distinctive epigenome signature for high-risk acute promyelocytic leukemia.

scientific article

Multi-platform discovery of haplotype-resolved structural variation in human genomes

Multi-platform discovery of haplotype-resolved structural variation in human genomes

scientific article published on 16 April 2019

Platelet function is modified by common sequence variation in megakaryocyte super enhancers

scientific article

Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences

scientific article

Rapid establishment of the European Bank for induced Pluripotent Stem Cells (EBiSC) - the Hot Start experience

scientific article

Relationship between genome and epigenome--challenges and requirements for future research

scientific article published on 18 June 2014

Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes

scientific article published on 21 March 2018

Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes

Report of the International Stem Cell Banking Initiative Workshop Activity: Current Hurdles and Progress in Seed-Stock Banking of Human Pluripotent Stem Cells.

scientific article published on 24 October 2017

The 1000 Genomes Project: data management and community access

scientific article (publication date: 27 April 2012)

The BLUEPRINT Data Analysis Portal.

scientific article

The Ensembl analysis pipeline

scientific article published on May 2004

The Ensembl gene annotation system

scientific article published on 23 June 2016

The European Nucleotide Archive in 2017.

scientific article published on 13 November 2017

The Organoid Cell Atlas

scientific article

The Organoid Cell Atlas: A Rosetta Stone for Biomedical Discovery and Regenerative Therapy ⬇️

journal article published in 2020

The functional spectrum of low-frequency coding variation ⬇️

scientific article published on September 14, 2011

The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics

scientific article published in November 2003

The human-induced pluripotent stem cell initiative-data resources for cellular genetics

scientific article

The international Genome sample resource (IGSR): A worldwide collection of genome variation incorporating the 1000 Genomes Project data

scientific article

The reference epigenome and regulatory chromatin landscape of chronic lymphocytic leukemia

scientific article published on 21 May 2018

Towards a European health research and innovation cloud (HRIC)

scientific article published on 19 February 2020

Transcriptional diversity during lineage commitment of human blood progenitors

scientific article

Variant calling on the GRCh38 assembly with the data from phase three of the 1000 Genomes Project

Whole-epigenome analysis in multiple myeloma reveals DNA hypermethylation of B cell-specific enhancers.

scientific article

Whole-genome fingerprint of the DNA methylome during human B cell differentiation

scientific article

β-Glucan Reverses the Epigenetic State of LPS-Induced Immunological Tolerance

scientific article

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