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List of works by Geraldine Butler

A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis

scientific article

A genome sequence survey shows that the pathogenic yeast Candida parapsilosis has a defective MTLa1 allele at its mating type locus

scientific article published on June 2005

ACE2, an activator of yeast metallothionein expression which is homologous to SWI5.

scientific article published on January 1991

Ace2p, a regulator of CTS1 (chitinase) expression, affects pseudohyphal production in Saccharomyces cerevisiae

scientific article published in September 1998

Analysis of gene evolution and metabolic pathways using the Candida Gene Order Browser

scientific article

Candida albicans transcription factor Ace2 regulates metabolism and is required for filamentation in hypoxic conditions

scientific article

Candida glabrata Transcription Factor Rpn4 Mediates Fluconazole Resistance Through Regulation of Ergosterol Biosynthesis and Plasma Membrane Permeability

scientific article published on 22 June 2020

Candida glabrata environmental stress response involves Saccharomyces cerevisiae Msn2/4 orthologous transcription factors

scientific article

Candida parapsilosis is a significant neonatal pathogen: a systematic review and meta-analysis

scientific article (publication date: May 2013)

Candida parapsilosis: from Genes to the Bedside

scientific article published on 27 February 2019

Characterization of carboxylate nanoparticle adhesion with the fungal pathogen Candida albicans

scientific article

Chromosomal G + C content evolution in yeasts: systematic interspecies differences, and GC-poor troughs at centromeres

scientific article

Cloning and analysis of the genes for a novel electron-transferring flavoprotein from Megasphaera elsdenii. Expression and characterization of the recombinant protein

scientific article

Cloning of the gene for flavodoxin from the anaerobic bacterium Megasphaera elsdenii

scientific article published on May 1995

Cloning, sequencing and expression of the gene for flavodoxin from Megasphaera elsdenii and the effects of removing the protein negative charge that is closest to N(1) of the bound FMN

article

Comparative genome analysis and gene finding in Candida species using CGOB.

scientific article published on 13 March 2013

Comparative genomic and transcriptomic analyses unveil novel features of azole resistance and adaptation to the human host in Candida glabrata

scientific article published on 26 October 2017

Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans

scientific article published on 10 September 2009

Conserved and divergent roles of Bcr1 and CFEM proteins in Candida parapsilosis and Candida albicans.

scientific article

Correction for Lombardi et al., "Plasmid-Based CRISPR-Cas9 Gene Editing in Multiple Candida Species"

scientific article published on 10 June 2020

Correction for Ma et al., "Susceptibility to Medium-Chain Fatty Acids Is Associated with Trisomy of Chromosome 7 in Candida albicans"

scientific article published on 14 August 2019

Correlating Genotype and Phenotype in the Asexual Yeast Candida orthopsilosis Implicates ZCF29 in Sensitivity to Caffeine

scientific article published on 04 September 2019

Correlation between biofilm formation and the hypoxic response in Candida parapsilosis

scientific article published on 16 January 2009

Dal81 Regulates Expression of Arginine Metabolism Genes in Candida parapsilosis.

scientific article

Development of a gene knockout system in Candida parapsilosis reveals a conserved role for BCR1 in biofilm formation

scientific article published on 22 June 2007

Different consequences of ACE2 and SWI5 gene disruptions for virulence of pathogenic and nonpathogenic yeasts

scientific article

Draft Genome Sequence of a Highly Heterozygous Yeast Strain from the Metschnikowia pulcherrima Subclade, UCD127.

scientific article

Draft Genome Sequence of a Red Basidiomycete Yeast, Symmetrospora coprosmae Strain UCD350, Isolated from Soil in Ireland

scientific article published on 31 October 2019

Draft Genome Sequence of the Birch Tree Fungal Pathogen Taphrina betulina UCD315

scientific article published on 27 November 2019

Draft Genome Sequence of the Yeast Nadsonia starkeyi-henricii UCD142, Isolated from Forest Soil in Ireland.

scientific article

Draft Genome Sequences of Two Isolates of the Yeast Kazachstania servazzii Recovered from Soil in Ireland

scientific article published on 31 October 2019

Draft Genome Sequences of Two Natural Isolates of the Yeast Barnettozyma californica from Ireland, UCD09 and UCD89.

scientific article published on 21 June 2018

Evidence from comparative genomics for a complete sexual cycle in the 'asexual' pathogenic yeast Candida glabrata

scientific article

Evidence of recent interkingdom horizontal gene transfer between bacteria and Candida parapsilosis

scientific article

Evolution of mating within the Candida parapsilosis species group

scientific article published on 18 February 2011

Evolution of pathogenicity and sexual reproduction in eight Candida genomes

scientific article

Evolution of the MAT locus and its Ho endonuclease in yeast species

scholarly article

Fluconazole and Voriconazole Resistance in Candida parapsilosis Is Conferred by Gain-of-Function Mutations in MRR1 Transcription Factor Gene

scientific article

From the first touch to biofilm establishment by the human pathogen Candida glabrata: a genome-wide to nanoscale view

scientific article published on 20 July 2021

Fungal sex and pathogenesis

scientific article published on January 2010

GAL1-GAL10 divergent promoter region of Saccharomyces cerevisiae contains negative control elements in addition to functionally separate and possibly overlapping upstream activating sequences

article

Gene editing in clinical isolates of Candida parapsilosis using CRISPR/Cas9.

scientific article published on 14 August 2017

Gene order evolution and paleopolyploidy in hemiascomycete yeasts

scientific article

Genome analysis of the yeast Diutina catenulata, a member of the Debaryomycetaceae/Metschnikowiaceae (CTG-Ser) clade.

scientific article published on 26 June 2018

Genomic differences between Candida glabrata and Saccharomyces cerevisiae around the MRPL28 and GCN3 loci

scientific article

Genomic insights into the atopic eczema-associated skin commensal yeast Malassezia sympodialis

scientific article published on 22 January 2013

Heat shock transcription factor activates transcription of the yeast metallothionein gene

scientific article published on March 1991

Hypoxia and Gene Expression in Eukaryotic Microbes ⬇️

scientific article published on June 26, 2013

Identification and characterization of MFA1, the gene encoding Candida albicans a-factor pheromone

scientific article published on 5 January 2007

Identification of Non-Coding RNAs in the Candida parapsilosis Species Group

scientific article

Identification of an Exceptionally Long Intron in the Gene of

article

Identification of an upstream activation site in the pyruvate decarboxylase structural gene (PDC1) of Saccharomyces cerevisiae.

scientific article

Identification of fungi in shotgun metagenomics datasets

scientific article published on 14 February 2018

Impact of the transcriptional regulator, Ace2, on the Candida glabrata secretome

scientific article published in January 2010

Inactivation of transcription factor gene ACE2 in the fungal pathogen Candida glabrata results in hypervirulence

scientific article

Molecular genotyping of Candida parapsilosis group I clinical isolates by analysis of polymorphic microsatellite markers

scientific article

Multiple Origins of the Pathogenic Yeast Candida orthopsilosis by Separate Hybridizations between Two Parental Species

scientific article (publication date: November 2016)

Overlapping and distinct roles of the duplicated yeast transcription factors Ace2p and Swi5p

scientific article

Parallel pathways of gene regulation: homologous regulators SWI5 and ACE2 differentially control transcription of HO and chitinase ⬇️

scientific article published on January 1, 1992

Phenotype switching affects biofilm formation by Candida parapsilosis

scientific article published in April 2005

Plasmid-Based CRISPR-Cas9 Gene Editing in Multiple Species

scientific article published on 13 March 2019

Polymorphic centromere locations in the pathogenic yeast Candida parapsilosis

scientific article published on 18 May 2020

Population genomics of the pathogenic yeast Candida tropicalis identifies hybrid isolates in environmental samples

scientific article published on 31 March 2021

Pseudomonas aeruginosa secreted factors impair biofilm development in Candida albicans

scientific article published on 11 February 2010

Regulation of the hypoxic response in Candida albicans

scientific article published on 24 September 2010

Sequence and analysis of the genome of the pathogenic yeast Candida orthopsilosis

scientific article

Susceptibility to Medium-Chain Fatty Acids Is Associated with Trisomy of Chromosome 7 in Candida albicans

scientific article published on 26 June 2019

TPP riboswitch-dependent regulation of an ancient thiamin transporter in Candida.

scientific article published on 31 May 2018

TUF factor binds to the upstream region of the pyruvate decarboxylase structural gene (PDC1) of Saccharomyces cerevisiae

scientific article

The APSES transcription factor Efg1 is a global regulator that controls morphogenesis and biofilm formation in Candida parapsilosis.

scientific article published on 15 August 2013

The CRISPR toolbox in medical mycology: State of the art and perspectives

scientific article published on 16 January 2020

The Candida albicans CaACE2 gene affects morphogenesis, adherence and virulence

scientific article

Transcriptional Response of Candida parapsilosis following Exposure to Farnesol

article

Transcriptional response of Candida parapsilosis following exposure to farnesol

scientific article published in July 2007

Unveiling the mechanisms of evolution towards fluconazole resistance of a clinical isolate: a transcriptomics approach

scientific article published on 21 December 2018

Using RNA-seq for Analysis of Differential Gene Expression in Fungal Species

scientific article published on January 2016

Using RNA-seq to determine the transcriptional landscape and the hypoxic response of the pathogenic yeast Candida parapsilosis

scientific article

Yeast genome evolution--the origin of the species

scientific article published on November 2007

Yeast's clickable chromosomes and other genome browsers

scientific article published on 01 June 1997

Zinc finger transcription factors displaced SREBP proteins as the major Sterol regulators during Saccharomycotina evolution

scientific article (publication date: 2014)

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