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List of works by Qunxin She

A BAC library and paired-PCR approach to mapping and completing the genome sequence of Sulfolobus solfataricus P2.

scientific article

A Type III-B Cmr effector complex catalyzes the synthesis of cyclic oligoadenylate second messengers by cooperative substrate binding

scientific article published on 01 November 2018

A Well-Conserved Archaeal B-Family Polymerase Functions as an Extender in Translesion Synthesis

scientific article published on 18 January 2022

A novel Sulfolobus non-conjugative extrachromosomal genetic element capable of integration into the host genome and spreading in the presence of a fusellovirus

scientific article published on 27 February 2007

A novel carboxyl-terminal protease derived from Paenibacillus lautus CHN26 exhibiting high activities at multiple sites of substrates

scientific article

A novel interference mechanism by a type IIIB CRISPR-Cmr module in Sulfolobus.

scientific article

A novel single-tailed fusiform Sulfolobus virus STSV2 infecting model Sulfolobus species

scientific article published on 27 October 2013

A putative ABC transporter is involved in negative regulation of biofilm formation by Listeria monocytogenes

scientific article published on 3 October 2008

A seed motif for target RNA capture enables efficient immune defence by a type III-B CRISPR-Cas system

scientific article published on 26 May 2019

A synthetic arabinose-inducible promoter confers high levels of recombinant protein expression in hyperthermophilic archaeon Sulfolobus islandicus.

scientific article

A transcriptional factor B paralog functions as an activator to DNA damage-responsive expression in archaea.

scientific article published on 30 March 2018

A type III-B CRISPR-Cas effector complex mediating massive target DNA destruction

scientific article

Allosteric regulation of Csx1, a type IIIB-associated CARF domain ribonuclease by RNAs carrying a tetraadenylate tail

scientific article published on 16 August 2017

An Orc1/Cdc6 ortholog functions as a key regulator in the DNA damage response in Archaea.

scientific article published in July 2018

An archaeal CRISPR type III-B system exhibiting distinctive RNA targeting features and mediating dual RNA and DNA interference.

scientific article published on 10 December 2014

An archaeal protein evolutionarily conserved in prokaryotes is a zinc-dependent metalloprotease

scientific article

An upstream activation element exerting differential transcriptional activation on an archaeal promoter

scientific article published on 8 October 2009

Archaea and the new age of microorganisms

scientific article published on 01 May 1998

Archaeal extrachromosomal genetic elements

scientific article

Archaeal integrases and mechanisms of gene capture

scientific article published on April 2004

Archaeal integrative genetic elements and their impact on genome evolution

scientific article

Archaeal promoter architecture and mechanism of gene activation

scientific article published on 01 January 2011

Archaeal viruses--novel, diverse and enigmatic

scientific article published on 27 May 2012

C68 from the Sulfolobus islandicus plasmid-virus pSSVx is a novel member of the AbrB-like transcription factor family

scientific article

CRISPR-Cas Adaptive Immune Systems of the Sulfolobales: Unravelling Their Complexity and Diversity

scientific article

CRISPR-Cas type I-A Cascade complex couples viral infection surveillance to host transcriptional regulation in the dependence of Csa3b

scientific article published on 15 December 2016

CRISPR-based immune systems of the Sulfolobales: complexity and diversity

scientific article published on January 2011

Characterization of pMC11, a plasmid with dual origins of replication isolated from Lactobacillus casei MCJ and construction of shuttle vectors with each replicon.

scientific article published on 22 March 2014

Characterization of the Sulfolobus host-SSV2 virus interaction

scientific article published on 3 August 2006

Cmr1 enables efficient RNA and DNA interference of a III-B CRISPR-Cas system by binding to target RNA and crRNA.

scientific article published on 5 September 2017

Cmr3 regulates the suppression on cyclic oligoadenylate synthesis by tag complementarity in a Type III-B CRISPR-Cas system

scientific article published on 17 July 2019

Comparative sequence analysis of cis elements present in Glycine max L. leghemoglobin lba and lbc3 genes

scientific article

Completing the sequence of the Sulfolobus solfataricus P2 genome

scientific article published in August 1998

Comprehensive search for accessory proteins encoded with archaeal and bacterial type III CRISPR-cas gene cassettes reveals 39 new cas gene families

article

Construction and characterization of three protein-targeting expression system in Lactobacillus casei.

scientific article

Coupling transcriptional activation of CRISPR-Cas system and DNA repair genes by Csa3a in Sulfolobus islandicus

scientific article published on September 2017

Development of a simvastatin selection marker for a hyperthermophilic acidophile, Sulfolobus islandicus

scientific article published on 11 November 2011

Dissection of the functional domains of an archaeal Holliday junction helicase

scientific article published on 06 November 2011

Diverse CRISPR-Cas responses and dramatic cellular DNA changes and cell death in pKEF9-conjugated Sulfolobus species

scientific article published on 20 April 2016

Dynamic properties of the Sulfolobus CRISPR/Cas and CRISPR/Cmr systems when challenged with vector-borne viral and plasmid genes and protospacers

scientific article

Efficient 5'-3' DNA end resection by HerA and NurA is essential for cell viability in the crenarchaeon Sulfolobus islandicus

scientific article

Enzymatic Switching Between Archaeal DNA Polymerases Facilitates Abasic Site Bypass

scientific article published on 20 December 2021

Evolution of the family of pRN plasmids and their integrase-mediated insertion into the chromosome of the crenarchaeon Sulfolobus solfataricus

scientific article published in November 2000

Exceptional thermal stability and organic solvent tolerance of an esterase expressed from a thermophilic host

scientific article published on 17 August 2011

Four newly isolated fuselloviruses from extreme geothermal environments reveal unusual morphologies and a possible interviral recombination mechanism

scientific article published on 23 July 2009

Gene capture in archaeal chromosomes

scientific article published in Nature

Genetic analyses in the hyperthermophilic archaeon Sulfolobus islandicus

scientific article published on February 2009

Genetic analysis of the Holliday junction resolvases Hje and Hjc in Sulfolobus islandicus

scientific article published on 3 February 2015

Genetic determinants of PAM-dependent DNA targeting and pre-crRNA processing in Sulfolobus islandicus.

scientific article published on 7 February 2013

Genetic elements in the extremely thermophilic archaeon Sulfolobus

scientific article published in August 1998

Genetic manipulation in Sulfolobus islandicus and functional analysis of DNA repair genes.

scientific article published on February 2013

Genetic profile of pNOB8 from Sulfolobus: the first conjugative plasmid from an archaeon

scientific article published on November 1998

Genetic technologies for extremely thermophilic microorganisms of Sulfolobus, the only genetically tractable genus of crenarchaea

scientific article published on 27 February 2017

Genome Analyses of Icelandic Strains of Sulfolobus islandicus, Model Organisms for Genetic and Virus-Host Interaction Studies

scientific article

Genomic analysis of Acidianus hospitalis W1 a host for studying crenarchaeal virus and plasmid life cycles

scientific article

Genomic and transcriptomic analyses reveal distinct biological functions for cold shock proteins (VpaCspA and VpaCspD) in Vibrio parahaemolyticus CHN25 during low-temperature survival.

scientific article

Genus-specific protein binding to the large clusters of DNA repeats (short regularly spaced repeats) present in Sulfolobus genomes

scientific article

Harnessing Type I and Type III CRISPR-Cas systems for genome editing

scientific article

Heterologous Expression of Mannanase and Developing a New Reporter Gene System in Lactobacillus casei and Escherichia coli

scientific article published on 12 November 2015

Key role of cysteine residues in catalysis and subcellular localization of sulfur oxygenase-reductase of Acidianus tengchongensis

scientific article

Knockouts of RecA-like proteins RadC1 and RadC2 have distinct responses to DNA damage agents in Sulfolobus islandicus

scientific article published on 7 June 2013

Major and minor crRNA annealing sites facilitate low stringency DNA protospacer binding prior to Type I-A CRISPR-Cas interference in Sulfolobus

scientific article published on 12 September 2016

Minimal enhancer elements of the leghemoglobinlba andlbc3 gene promoters fromGlycine max L. have different properties

article

Mobile elements in archaeal genomes

scientific article

Modulation of CRISPR locus transcription by the repeat-binding protein Cbp1 in Sulfolobus.

scientific article published in December 2011

Molecular biology of fuselloviruses and their satellites.

scientific article published on 23 February 2014

Molecular cloning of a novel bioH gene from an environmental metagenome encoding a carboxylesterase with exceptional tolerance to organic solvents

scientific article

Nanobiomotors of archaeal DNA repair machineries: current research status and application potential

scientific article

Non-autonomous mobile elements in the crenarchaeon Sulfolobus solfataricus

scientific article published on February 2001

Novel RepA-MCM proteins encoded in plasmids pTAU4, pORA1 and pTIK4 from Sulfolobus neozealandicus

scientific article published on May 2005

Novel bacterial sulfur oxygenase reductases from bioreactors treating gold-bearing concentrates

scientific article published on 17 November 2006

Novel insights into gene regulation of the rudivirus SIRV2 infecting Sulfolobus cells

scientific article published on 12 April 2013

Nucleotide sequence of pOLA52: a conjugative IncX1 plasmid from Escherichia coli which enables biofilm formation and multidrug efflux

scientific article published on 28 April 2008

Phenotypic, proteomic, and genomic characterization of a putative ABC-transporter permease involved in Listeria monocytogenes biofilm formation

scientific article

Relationships between fuselloviruses infecting the extremely thermophilic archaeon Sulfolobus: SSV1 and SSV2.

scientific article published in May 2003

Revealing the essentiality of multiple archaeal pcna genes using a mutant propagation assay based on an improved knockout method

scientific article published on 12 August 2010

Reverse Gyrase Functions in Genome Integrity Maintenance by Protecting DNA Breaks In Vivo

scientific article published on 22 June 2017

Sequences and replication of genomes of the archaeal rudiviruses SIRV1 and SIRV2: relationships to the archaeal lipothrixvirus SIFV and some eukaryal viruses

scientific article published on December 2001

Specificity and function of archaeal DNA replication initiator proteins

scientific article

Structural and Functional Characterization of an Archaeal Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR)-associated Complex for Antiviral Defense (CASCADE)

scientific article

Sulfolobus genome: from genomics to biology

scientific article

Sulfolobus replication factor C stimulates the activity of DNA polymerase B1

scientific article

Sulfolobus tengchongensis spindle-shaped virus STSV1: virus-host interactions and genomic features

scientific article

Sulfolobus turreted icosahedral virus c92 protein responsible for the formation of pyramid-like cellular lysis structures

scientific article

T(lys), a newly identified Sulfolobus spindle-shaped virus 1 transcript expressed in the lysogenic state, encodes a DNA-binding protein interacting at the promoters of the early genes

scientific article published on 20 March 2013

The apt/6-Methylpurine Counterselection System and Its Applications in Genetic Studies of the Hyperthermophilic Archaeon Sulfolobus islandicus

scientific article published on 11 March 2016

The complete genome of the crenarchaeon Sulfolobus solfataricus P2

scientific article

The genetic element pSSVx of the extremely thermophilic crenarchaeon Sulfolobus is a hybrid between a plasmid and a virus

scientific article published on October 1999

The genome of Hyperthermus butylicus : a sulfur-reducing, peptide fermenting, neutrophilic Crenarchaeote growing up to 108 °C

scientific article

Tolerance of Sulfolobus SMV1 virus to the immunity of I-A and III-B CRISPR-Cas systems in Sulfolobus islandicus

scientific article published on 9 April 2018

Transcription termination in the plasmid/virus hybrid pSSVx from Sulfolobus islandicus

scientific article published on 25 August 2010

Transcriptional analysis of the genetic element pSSVx: differential and temporal regulation of gene expression reveals correlation between transcription and replication

scientific article published on 22 June 2007

Transcriptional regulator-mediated activation of adaptation genes triggers CRISPR de novo spacer acquisition

scientific article

Transcriptome analysis of Sulfolobus solfataricus infected with two related fuselloviruses reveals novel insights into the regulation of CRISPR-Cas system

scientific article published on 17 April 2015

Transcriptomic analysis of the SSV2 infection of Sulfolobus solfataricus with and without the integrative plasmid pSSVi

scientific article published on 08 April 2013

Unmarked gene deletion and host-vector system for the hyperthermophilic crenarchaeon Sulfolobus islandicus

scientific article published on 10 June 2009

Unravelling the Role of the F55 Regulator in the Transition from Lysogeny to UV Induction of Sulfolobus Spindle-Shaped Virus 1.

scientific article published on 15 April 2015

pING family of conjugative plasmids from the extremely thermophilic archaeon Sulfolobus islandicus: insights into recombination and conjugation in Crenarchaeota

scientific article

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