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List of works by Yegor Vassetzky

3D genomics imposes evolution of the domain model of eukaryotic genome organization

scientific article

A Comparison of Techniques to Evaluate the Effectiveness of Genome Editing.

scientific article published on 17 November 2017

A One-Step PCR-Based Assay to Evaluate the Efficiency and Precision of Genomic DNA-Editing Tools.

scientific article published on 8 March 2017

A functional role for 4qA/B in the structural rearrangement of the 4q35 region and in the regulation of FRG1 and ANT1 in facioscapulohumeral dystrophy

scientific article

A nuclear matrix attachment site in the 4q35 locus has an enhancer-blocking activity in vivo: implications for the facio-scapulo-humeral dystrophy

scientific article

A requiem to the nuclear matrix: from a controversial concept to 3D organization of the nucleus

scientific article published on 25 March 2014

A set of vectors for introduction of antibiotic resistance genes by in vitro Cre-mediated recombination

scientific article

A transcription-dependent DNase I-hypersensitive site in a far upstream segment of the chicken alpha-globin gene domain coincides with a matrix attachment region

scientific article

A. E. Braunstein Plenary Lecture. Nuclear skeleton, DNA domains and control of replication and transcription

scientific article published on September 1991

Academy reform needs a reality check

journal article; published in Nature on 2013-07-17

An unusual extended DNA loop attachment region is located in the human dystrophin gene

scientific article published on 01 November 2006

Analysis of genes regulated by DUX4 via oxidative stress reveals potential therapeutic targets for treatment of facioscapulohumeral dystrophy

publication published on 13 May 2021

Analysis of the chicken DNA fragments that contain structural sites of attachment to the nuclear matrix: DNA-matrix interactions and replication

scientific article published in July 2000

Antagonistic functional duality of cancer genes

scientific article published on 09 August 2013

Basic science in Russia under threat

scientific article published in Nature

Bradykinin antagonists and thiazolidinone derivatives as new potential anti-cancer compounds.

scientific article

Cancer-related genes in the transcription signature of facioscapulohumeral dystrophy myoblasts and myotubes

scientific article published on 17 December 2013

Characterization of DNA pattern in the site of permanent attachment to the nuclear matrix located in the vicinity of replication origin

scientific article published on April 1990

Chromatin domains and regulation of transcription

scientific article

Chromatin loop domain organization within the 4q35 locus in facioscapulohumeral dystrophy patients versus normal human myoblasts

scholarly article

Chromatin remodelling and DNA replication: from nucleosomes to loop domains

scientific article

Chromosome conformation capture (from 3C to 5C) and its ChIP-based modification

scientific article

Control of DNA integrity in skeletal muscle under physiological and pathological conditions

scientific article published on 25 April 2017

Control of gene expression in Xenopus early development.

scientific article published in January 1998

Correction of the FSHD myoblast differentiation defect by fusion with healthy myoblasts

scientific article

DNA fragments which specifically bind to isolated nuclear matrix in vitro interact with matrix-associated DNA topoisomerase II.

scientific article published in March 1989

DNA polymorphism and epigenetic marks modulate the affinity of a scaffold/matrix attachment region to the nuclear matrix

scientific article

DNA replication initiates at domains overlapping with nuclear matrix attachment regions in the xenopus and mouse c-myc promoter

scientific article published on May 2004

DNA topoisomerase II mutations and resistance to anti-tumor drugs

scientific article

DUX4 Pathological Expression: Causes and Consequences in Cancer

scientific article published on 16 April 2019

DUX4-induced constitutive DNA damage and oxidative stress contribute to aberrant differentiation of myoblasts from FSHD patients.

scientific article published on 9 August 2016

Defective regulation of microRNA target genes in myoblasts from facioscapulohumeral dystrophy patients

scientific article published on 20 October 2013

Determination of the chromatin domain structure in arrayed repeat regions: organization of the somatic 5S RNA domain during embryogenesis in Xenopus laevis

scientific article published on 01 December 2007

Development-dependent changes in the tight DNA-protein complexes of barley on chromosome and gene level

scientific article

Differences in transcription patterns between induced pluripotent stem cells produced from the same germ layer are erased upon differentiation.

scientific article

Distinct Patterns of Colocalization of the CCND1 and CMYC Genes With Their Potential Translocation Partner IGH at Successive Stages of B-Cell Differentiation.

scientific article published on 6 March 2016

Distinct distribution of ectopically expressed histone variants H2A.Bbd and MacroH2A in open and closed chromatin domains

scientific article

Domain organization of eukaryotic genome

scientific article

Dual Role of the Extracellular Domain of Human Mucin MUC1 in Metastasis.

scientific article published on 13 April 2017

Dux4 controls migration of mesenchymal stem cells through the Cxcr4-Sdf1 axis

scientific article published on 18 August 2016

Dynamics of double strand breaks and chromosomal translocations

scientific article

Early replication timing of the chicken alpha-globin gene domain correlates with its open chromatin state in cells of different lineages.

scientific article

Easy and robust electrotransfection protocol for efficient ectopic gene expression and genome editing in human B cells

scientific article published on 30 September 2020

Ectopic expression of inactive forms of yeast DNA topoisomerase II confers resistance to the anti-tumour drug, etoposide

scientific article

Effect of DNA loop anchorage regions (LARs) and microinjection timing on expression of beta-galactosidase gene injected into one-cell rabbit embryos

scientific article published on 01 August 2004

Effect of Environmental Factors on Nuclear Organization and Transformation of Human B Lymphocytes.

scientific article

Epigenetic modifications, chromatin distribution and TP53 transcription in a model of breast cancer progression

scientific article

Eukaryotic enhancers: common features, regulation, and participation in diseases

scientific article published on 26 February 2015

Evolution of the Genome 3D Organization: Comparison of Fused and Segregated Globin Gene Clusters

scientific article

Evolution of α- and β-globin genes and their regulatory systems in light of the hypothesis of domain organization of the genome

scientific article

Expression of SARS-CoV-2 entry factors in lung epithelial stem cells and its potential implications for COVID-19

scientific article published on 20 October 2020

Facioscapulohumeral dystrophy myoblasts efficiently repair moderate levels of oxidative DNA damage

scientific article published on 9 February 2016

From an increase in the number of tandem repeats through the decrease of sialylation to the downregulation of MUC1 expression level

scientific article published on 27 September 2018

Functional muscle impairment in facioscapulohumeral muscular dystrophy is correlated with oxidative stress and mitochondrial dysfunction

scientific article published on 11 July 2012

Functional roles of HIV-1 Tat protein in the nucleus.

scientific article

Genetic and Epigenetic Mechanisms of β-Globin Gene Switching

scientific article published on 01 April 2018

HIV Tat induces a prolonged MYC relocalization next to IGH in circulating B-cells.

scientific article published on 31 March 2017

HIV-1 Tat protein induces DNA damage in human peripheral blood B-lymphocytes via mitochondrial ROS production.

scientific article

HIV-1 Tat protein induces aberrant activation of AICDA in human B-lymphocytes from peripheral blood

scientific article published on 31 January 2019

HIV-1, HAART and cancer: A complex relationship

scientific article published on 01 November 2019

Heterochromatin restricts the mobility of nuclear bodies

article

High resolution genome-wide analysis of chromosomal alterations in Burkitt's lymphoma

scientific article

Histone deacetylase inhibitor abexinostat affects chromatin organization and gene transcription in normal B cells and in mantle cell lymphoma.

scientific article published on 13 January 2016

Histone deacetylase inhibitors and epigenetic regulation in lymphoid malignancies

scientific article published on 30 September 2015

In embryonic chicken erythrocytes actively transcribed alpha globin genes are not associated with the nuclear matrix.

scientific article

Increased levels of adenine nucleotide translocator 1 protein and response to oxidative stress are early events in facioscapulohumeral muscular dystrophy muscle

scientific article published on 17 November 2004

Interaction in vivo between the two matrix attachment regions flanking a single chromatin loop

scientific article published on 14 December 2008

Loop domain organization of the p53 locus in normal and breast cancer cells correlates with the transcriptional status of the TP53 and the neighboring genes

scientific article published on August 2011

MUC1 Story: Great Expectations, Disappointments and the Renaissance.

scientific article published on 17 August 2017

Mapping long-range chromatin organization within the chicken alpha-globin gene domain using oligonucleotide DNA arrays.

scientific article

Metal ions modify DNA-protecting and mutagen-scavenging capacities of the AV-153 1,4-dihydropyridine

scientific article published on 24 July 2019

MiR-34a is up-regulated in response to low dose, low energy X-ray induced DNA damage in breast cells

scientific article published on 05 October 2013

Mitotic remodeling of the replicon and chromosome structure.

scientific article published in December 2005

Mobility of Nuclear Components and Genome Functioning

scientific article published on 01 June 2018

Myoblasts from affected and non-affected FSHD muscles exhibit morphological differentiation defects

scientific article

Nuclear localization of translocation partners in differentiating B-cells.

scientific article published on September 2015

Nuclear matrix and structural and functional compartmentalization of the eucaryotic cell nucleus

scientific article

Nuclear matrix attachment regions and topoisomerase II binding and reaction sites in the vicinity of a chicken DNA replication origin

scientific article published on May 1991

Nucleolus: A Central Hub for Nuclear Functions

scientific article published on 05 June 2019

Oncogenic Properties of the EBV ZEBRA Protein

scientific article published on 05 June 2020

Pearls in the junk: dissecting the molecular pathogenesis of facioscapulohumeral muscular dystrophy

scientific article published on 29 October 2008

Perinucleolar relocalization and nucleolin as crucial events in the transcriptional activation of key genes in mantle cell lymphoma.

scientific article published on 22 January 2014

Proteins tightly bound to DNA: new data and old problems

scientific article

RNA-dependent disassembly of nuclear bodies.

scientific article published on 14 November 2016

Recruitment of RNA polymerase II in the Ifng gene promoter correlates with the nuclear matrix association in activated T helper cells.

scientific article published on 18 May 2007

Ring-like distribution of constitutive heterochromatin in bovine senescent cells

scientific article

Selective matrix attachment regions in T helper cell subsets support loop conformation in the Ifng gene

scientific article

Simultaneous miRNA and mRNA transcriptome profiling of human myoblasts reveals a novel set of myogenic differentiation-associated miRNAs and their target genes ⬇️

scientific article

Step-wise and punctuated genome evolution drive phenotype changes of tumor cells.

scientific article published on 27 December 2014

T-antigen interactions with chromatin and p53 during the cell cycle in extracts from xenopus eggs

scientific article

Tat basic domain: A "Swiss army knife" of HIV-1 Tat?

scientific article published on 04 January 2019

Temozolomide promotes genomic and phenotypic changes in glioblastoma cells.

scientific article published on 5 May 2016

The IGH locus relocalizes to a "recombination compartment" in the perinucleolar region of differentiating B-lymphocytes.

scientific article published on 7 April 2017

The Krüppel-like factor 15 as a molecular link between myogenic factors and a chromosome 4q transcriptional enhancer implicated in facioscapulohumeral dystrophy

scientific article published on 21 September 2011

The distribution of tightly bound proteins along the DNA chain reflects the type of cell differentiation

scientific article published on May 1988

The epigenetic landscape of mammary gland development and functional differentiation

scientific article

The microRNA-205-5p is correlated to metastatic potential of 21T series: A breast cancer progression model.

scientific article

The presence of sequence-specific protein binding sites correlate with replication activity and matrix binding in a 1.7 Kb-long DNA fragment of the chicken alpha-globin gene domain

scientific article

The sequence-specific nuclear matrix binding factor F6 is a chicken GATA-like protein

scientific article

The upstream area of the chicken alpha-globin gene domain is transcribed in both directions in the same cells

scientific article published in August 2005

Tightly bound to DNA proteins: possible universal substrates for intranuclear processes

scientific article published on 06 October 2011

Topoisomerase I is associated with the regulatory region of transcriptionally active SV 40 minichromosomes

scientific article published on June 1990

Topoisomerase II forms multimers in vitro: effects of metals, beta-glycerophosphate, and phosphorylation of its C-terminal domain

scientific article published on October 1994

Topologically-associating domains: gene warehouses adapted to serve transcriptional regulation

scientific article published on 25 April 2016

Transcription factories in the context of the nuclear and genome organization

scientific article published on 31 August 2011

Transcription- and apoptosis-dependent long-range distribution of tight DNA-protein complexes in the chicken alpha-globin gene

scientific article

Transcriptional enhancer in the vicinity of a replication origin within the 5' region of the chicken alpha-globin gene domain

scientific article published in February 1991

[Role of the Nucleolus in Rearrangements of the IGH Locus]

scientific article published on 01 March 2018

mTORC1 pathway in DNA damage response

scientific article published on 22 June 2018

miR-205 is involved in metastatic potential of 21T series, a breast cancer progression model

scientific article

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