List of works - Henning Seedorf

Bacteria from diverse habitats colonize and compete in the mouse gut.

scientific article

Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla

scholarly article

Characterizing the interactions between a naturally primed immunoglobulin A and its conserved Bacteroides thetaiotaomicron species-specific epitope in gnotobiotic mice

scientific article published on 20 March 2015

Comparative Genomic Analysis of Members of the Genera and Reveals Distinct Clades with Specific Potential Metabolic Functions

scientific article published on 19 August 2018

Complete Genome Sequence of Duncaniella muris Strain B8, Isolated from the Feces of C57/BL6 Mice

scientific article published on 25 July 2019

Complete Genome Sequence of Methanothermobacter marburgensis, a Methanoarchaeon Model Organism

scientific article

Complete Genome Sequence of Sponge-Associated Tenacibaculum mesophilum DSM 13764T

scientific article published on 27 November 2019

Conformational similarities in the beta-ionone ring region of the rhodopsin chromophore in its ground state and after photoactivation to the metarhodopsin-I intermediate.

scientific article published in November 2003

Coupled ferredoxin and crotonyl coenzyme A (CoA) reduction with NADH catalyzed by the butyryl-CoA dehydrogenase/Etf complex from Clostridium kluyveri

scientific article published on 9 November 2007

Draft Genome Sequences of Methanobrevibacter curvatus DSM11111, Methanobrevibacter cuticularis DSM11139, Methanobrevibacter filiformis DSM11501, and Methanobrevibacter oralis DSM7256. ⬇️

scientific article published on 23 June 2016

F420H2 oxidase (FprA) from Methanobrevibacter arboriphilus, a coenzyme F420-dependent enzyme involved in O2 detoxification

scientific article

Few highly abundant operational taxonomic units dominate within rumen methanogenic archaeal species in New Zealand sheep and cattle

scientific article

Insights into the microbiome of farmed Asian sea bass (Lates calcarifer) with symptoms of tenacibaculosis and description of Tenacibaculum singaporense sp. nov

scientific article published on 20 February 2020

Methane yield phenotypes linked to differential gene expression in the sheep rumen microbiome.

scientific article

More than 200 genes required for methane formation from H₂ and CO₂ and energy conservation are present in Methanothermobacter marburgensis and Methanothermobacter thermautotrophicus

scientific article

Natural variation in methane emission of sheep fed on a lucerne pellet diet is unrelated to rumen ciliate community type.

scientific article published on 26 January 2016

Nutrient-based diet modifications impact on the gut microbiome of the Javan slow loris (Nycticebus javanicus)

scientific article published on 11 March 2019

Phylogeny of intestinal ciliates, including Charonina ventriculi, and comparison of microscopy and 18S rRNA gene pyrosequencing for rumen ciliate community structure analysis.

scientific article

RIM-DB: a taxonomic framework for community structure analysis of methanogenic archaea from the rumen and other intestinal environments

scientific article

Re-citrate synthase from Clostridium kluyveri is phylogenetically related to homocitrate synthase and isopropylmalate synthase rather than to Si-citrate synthase

scientific article published on 30 March 2007

Si-face stereospecificity at C5 of coenzyme F420 for F420H2 oxidase from methanogenic Archaea as determined by mass spectrometry

scientific article published in October 2005

Simultaneous amplicon sequencing to explore co-occurrence patterns of bacterial, archaeal and eukaryotic microorganisms in rumen microbial communities

scientific article (publication date: 2013)

Structure of coenzyme F420H2 oxidase (FprA), a di-iron flavoprotein from methanogenic Archaea catalyzing the reduction of O2 to H2O

scientific article

The Draft Genome of the Non-Host-Associated Methanobrevibacter arboriphilus Strain DH1 Encodes a Large Repertoire of Adhesin-Like Proteins.

scientific article

The genome of Clostridium kluyveri, a strict anaerobe with unique metabolic features.

scholarly article

The genome sequence of Methanosphaera stadtmanae reveals why this human intestinal archaeon is restricted to methanol and H2 for methane formation and ATP synthesis

scientific article

The long-term stability of the human gut microbiota

scientific article

Two different bacterial community types are linked with the low-methane emission trait in sheep

scientific article (publication date: 2014)

List of works by Henning Seedorf

Bacteria from diverse habitats colonize and compete in the mouse gut.

Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla

Characterizing the interactions between a naturally primed immunoglobulin A and its conserved Bacteroides thetaiotaomicron species-specific epitope in gnotobiotic mice

Comparative Genomic Analysis of Members of the Genera and Reveals Distinct Clades with Specific Potential Metabolic Functions

Complete Genome Sequence of Duncaniella muris Strain B8, Isolated from the Feces of C57/BL6 Mice

Complete Genome Sequence of Methanothermobacter marburgensis, a Methanoarchaeon Model Organism

Complete Genome Sequence of Sponge-Associated Tenacibaculum mesophilum DSM 13764T

Conformational similarities in the beta-ionone ring region of the rhodopsin chromophore in its ground state and after photoactivation to the metarhodopsin-I intermediate.

Coupled ferredoxin and crotonyl coenzyme A (CoA) reduction with NADH catalyzed by the butyryl-CoA dehydrogenase/Etf complex from Clostridium kluyveri

Draft Genome Sequences of Methanobrevibacter curvatus DSM11111, Methanobrevibacter cuticularis DSM11139, Methanobrevibacter filiformis DSM11501, and Methanobrevibacter oralis DSM7256. ⬇️

F420H2 oxidase (FprA) from Methanobrevibacter arboriphilus, a coenzyme F420-dependent enzyme involved in O2 detoxification

Few highly abundant operational taxonomic units dominate within rumen methanogenic archaeal species in New Zealand sheep and cattle

Insights into the microbiome of farmed Asian sea bass (Lates calcarifer) with symptoms of tenacibaculosis and description of Tenacibaculum singaporense sp. nov

Methane yield phenotypes linked to differential gene expression in the sheep rumen microbiome.

More than 200 genes required for methane formation from H₂ and CO₂ and energy conservation are present in Methanothermobacter marburgensis and Methanothermobacter thermautotrophicus

Natural variation in methane emission of sheep fed on a lucerne pellet diet is unrelated to rumen ciliate community type.

Nutrient-based diet modifications impact on the gut microbiome of the Javan slow loris (Nycticebus javanicus)

Phylogeny of intestinal ciliates, including Charonina ventriculi, and comparison of microscopy and 18S rRNA gene pyrosequencing for rumen ciliate community structure analysis.

RIM-DB: a taxonomic framework for community structure analysis of methanogenic archaea from the rumen and other intestinal environments

Re-citrate synthase from Clostridium kluyveri is phylogenetically related to homocitrate synthase and isopropylmalate synthase rather than to Si-citrate synthase

Si-face stereospecificity at C5 of coenzyme F420 for F420H2 oxidase from methanogenic Archaea as determined by mass spectrometry

Simultaneous amplicon sequencing to explore co-occurrence patterns of bacterial, archaeal and eukaryotic microorganisms in rumen microbial communities

Structure of coenzyme F420H2 oxidase (FprA), a di-iron flavoprotein from methanogenic Archaea catalyzing the reduction of O2 to H2O

The Draft Genome of the Non-Host-Associated Methanobrevibacter arboriphilus Strain DH1 Encodes a Large Repertoire of Adhesin-Like Proteins.

The genome of Clostridium kluyveri, a strict anaerobe with unique metabolic features.

The genome sequence of Methanosphaera stadtmanae reveals why this human intestinal archaeon is restricted to methanol and H2 for methane formation and ATP synthesis

The long-term stability of the human gut microbiota

Two different bacterial community types are linked with the low-methane emission trait in sheep