Search filters

List of works by Andreas Bremges

A silent exonic SNP in kdm3a affects nucleic acids structure but does not regulate experimental autoimmune encephalomyelitis

scientific article

An integrated metagenome and -proteome analysis of the microbial community residing in a biogas production plant

scientific article

Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome.

scientific article

Assessing taxonomic metagenome profilers with OPAL

Assessing taxonomic metagenome profilers with OPAL

scientific article published on 04 March 2019

Bioboxes: standardised containers for interchangeable bioinformatics software

scientific article

CAMISIM: simulating metagenomes and microbial communities

scientific article published on 08 February 2019

CAMITAX: Taxon labels for microbial genomes

scientific article published on 01 January 2020

Characterisation of a stable laboratory co-culture of acidophilic nanoorganisms

scientific article

Complete genome sequence of the cyanide-degrading bacterium Pseudomonas pseudoalcaligenes CECT5344.

scientific article

Critical Assessment of Metagenome Interpretation Enters the Second Round.

scientific article published on 10 July 2018

Critical Assessment of Metagenome Interpretation − a benchmark of computational metagenomics software

article

Critical Assessment of Metagenome Interpretation-a benchmark of metagenomics software.

scientific article published on 2 October 2017

Critical Assessment of Metagenome Interpretation: the second round of challenges

scientific article published in April 2022

Deeply sequenced metagenome and metatranscriptome of a biogas-producing microbial community from an agricultural production-scale biogas plant

scientific article published on 30 July 2015

Fine-tuning structural RNA alignments in the twilight zone

scientific article

Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing.

scientific article published on 6 April 2016

Fractionation of biogas plant sludge material improves metaproteomic characterization to investigate metabolic activity of microbial communities.

scientific article published on 07 July 2015

From Genomes to Phenotypes: Traitar, the Microbial Trait Analyzer

scientific article

Genomic characterization of Defluviitoga tunisiensis L3, a key hydrolytic bacterium in a thermophilic biogas plant and its abundance as determined by metagenome fragment recruitment

scientific article published on 7 May 2016

Genomics and prevalence of bacterial and archaeal isolates from biogas-producing microbiomes

scientific article published on 13 November 2017

Identification and genome reconstruction of abundant distinct taxa in microbiomes from one thermophilic and three mesophilic production-scale biogas plants

scientific article

Investigation of different nitrogen reduction routes and their key microbial players in wood chip-driven denitrification beds.

scientific article

MeCorS: Metagenome-enabled error correction of single cell sequencing reads

scientific article published on 15 March 2016

Metagenomics and CAZyme Discovery

scientific article published on January 2017

Predicting antimicrobial resistance in Pseudomonas aeruginosa with machine learning-enabled molecular diagnostics

scientific article published on 12 February 2020

Targeted in situ metatranscriptomics for selected taxa from mesophilic and thermophilic biogas plants

scientific article

Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates

scientific article

Paulina is supported by:

About Paulina

Help