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List of works by Thomas Lufkin

A conditional mouse line for lineage tracing of Sox9 loss-of-function cells using enhanced green fluorescent protein

scientific article published on 2 August 2013

A developmental transcriptomic analysis of Pax1 and Pax9 in embryonic intervertebral disc development.

scientific article published on 23 December 2016

A quantitative and qualitative RNA expression profiling assay for cell culture with single cell resolution

scientific article published on 10 August 2017

A symphony of inner ear developmental control genes

scientific article

Alternative splicing in self-renewal of embryonic stem cells

scientific article published on 9 June 2011

An Integrative Developmental Genomics and Systems Biology Approach to Identify an In Vivo Sox Trio-Mediated Gene Regulatory Network in Murine Embryos

scientific article

Assignment of the murine Hmx1 homeobox gene to the proximal region of mouse chromosome 5.

scientific article published in January 1997

BAC transgenic zebrafish for transcriptional promoter and enhancer studies

scientific article

Bovine annulus fibrosus cell lines isolated from intervertebral discs

scientific article published on 03 October 2016

Comprehensive benchmarking reveals H2BK20 acetylation as a distinctive signature of cell-state-specific enhancers and promoters

scientific article published on 8 March 2016

Conserved and non-conserved enhancers direct tissue specific transcription in ancient germ layer specific developmental control genes

scientific article

Development of the "Three-step MACS": a novel strategy for isolating rare cell populations in the absence of known cell surface markers from complex animal tissue

scientific article published on July 2012

Dlx genes pattern mammalian jaw primordium by regulating both lower jaw-specific and upper jaw-specific genetic programs

scientific article published on September 2008

Dlx5 and Dlx6 homeobox genes are required for specification of the mammalian vestibular apparatus

scientific journal article

Dlx5 and Dlx6 regulate the development of parvalbumin-expressing cortical interneurons

scientific article

Dlx5 and Dlx6: an evolutionary conserved pair of murine homeobox genes expressed in the embryonic skeleton

scientific article published on 01 June 1996

Dlx6 regulates molecular properties of the striatum and central nucleus of the amygdala ⬇️

scientific article published on August 15, 2011

Embryonic stem cells: protein interaction networks

scientific article

Emerging stem cell therapies: treatment, safety, and biology

scientific article published on 2 August 2012

Filling the silent void: genetic therapies for hearing impairment

scientific article

Gene expression profiles of Bapx1 expressing FACS sorted cells from wildtype and Bapx1-EGFP null mouse embryos

scientific article published on September 2015

Generating mouse lines for lineage tracing and knockout studies

scientific article published in January 2014

Genome wide binding (ChIP-Seq) of murine Bapx1 and Sox9 proteins in vivo and in vitro

scientific article published on 08 September 2016

Hmx2 and Hmx3 homeobox genes direct development of the murine inner ear and hypothalamus and can be functionally replaced by Drosophila Hmx

scientific journal article

Homeobox gene Sax2 deficiency causes an imbalance in energy homeostasis

scientific journal article

Implications for a Stem Cell Regenerative Medicine Based Approach to Human Intervertebral Disk Degeneration

scientific article published on 07 March 2017

In situ hybridization of whole-mount mouse embryos with RNA probes: hybridization, washes, and histochemistry

scientific article published on 01 November 2007

In situ hybridization of whole-mount mouse embryos with RNA probes: preparation of embryos and probes

scientific article published on 01 November 2007

In vivo genome-wide analysis of multiple tissues identifies gene regulatory networks, novel functions and downstream regulatory genes for Bapx1 and its co-regulation with Sox9 in the mammalian vertebral column

scientific article

Isolation and 3D expansion of multipotent Sox9+ mouse lung progenitors

scientific article published on 6 November 2017

Klf2 is an essential factor that sustains ground state pluripotency.

scientific article published in June 2014

Klhl14 Antisense RNA is a Target of Key Skeletogenic Transcription Factors in the Developing Intervertebral Disc

scientific article published on 01 March 2019

Molecular cloning, chromosomal mapping and developmental expression of BAPX1, a novel human homeobox-containing gene homologous to Drosophila bagpipe

scientific article

Mouse strain specific gene expression differences for illumina microarray expression profiling in embryos

scientific article

Ontogenic Identification and Analysis of Mesenchymal Stromal Cell Populations during Mouse Limb and Long Bone Development.

scientific article published on September 2017

Pax1(EGFP): new wildtype and mutant EGFP mouse lines for molecular and fate mapping studies

scientific article published on 25 February 2013

Plate in situ hybridization (PISH) as a time and cost effective RNA expression assay to study phenotypic heterogeneity in a population of cultured murine cells at single cell resolution

scientific article published on 7 April 2015

Potential biomarkers of the mature intervertebral disc identified at the single cell level

scientific article published on 18 November 2018

Quantitative Single-Cell Transcript Assessment of Biomarkers Supports Cellular Heterogeneity in the Bovine IVD

scientific article published on 12 May 2019

RNA in situ hybridization characterization of non-enzymatic derived bovine intervertebral disc cell lineages suggests progenitor cell potential

scientific article published on 04 January 2017

Reprogramming of fibroblasts into induced pluripotent stem cells with orphan nuclear receptor Esrrb.

scientific article published on 11 January 2009

Simultaneous detection of multiple mRNAs and proteins in bovine IVD cells and tissue with single cell resolution

scientific article published on 09 September 2020

Specification of jaw subdivisions by Dlx genes

scientific article

Sprouty1 is a critical regulator of GDNF/RET-mediated kidney induction

scientific journal article

Stemming the Degeneration: IVD Stem Cells and Stem Cell Regenerative Therapy for Degenerative Disc Disease

scientific article published on 01 January 2013

TTC9A deficiency induces estradiol-mediated changes in hippocampus and amygdala neuroplasticity-related gene expressions in female mice

scientific article published on 10 February 2020

Tetratricopeptide repeat domain 9A modulates anxiety-like behavior in female mice

scientific article

Tetratricopeptide repeat domain 9A negatively regulates estrogen receptor alpha activity

scientific article

The Dlx5 and Dlx6 homeobox genes are essential for craniofacial, axial, and appendicular skeletal development

scientific article

The Sound of Silence: Mouse Models for Hearing Loss ⬇️

scientific article published on October 9, 2011

The role of post-transcriptional RNA processing and plasmid vector sequences on transient transgene expression in zebrafish

scientific article published on 7 August 2009

Transcriptome analysis of zebrafish embryogenesis using microarrays

scientific article

Uniform, optimal signal processing of mapped deep-sequencing data

scientific article

Zfp206 is a transcription factor that controls pluripotency of embryonic stem cells

scientific journal article

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