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List of works by Jinfeng Liu

(1)H, (13)C and (15)N assignments for the Archaeglobus fulgidis protein AF2095.

scientific article published on September 2004

A comprehensive transcriptional portrait of human cancer cell lines

scientific article published on 08 December 2014

An integrative analysis of colon cancer identifies an essential function for PRPF6 in tumor growth

scientific article

Association of C-terminal ubiquitin hydrolase BRCA1-associated protein 1 with cell cycle regulator host cell factor 1

scientific article

Automatic prediction of protein function

scientific article

Automatic target selection for structural genomics on eukaryotes

scientific article published in August 2004

Axl as a potential therapeutic target in cancer: role of Axl in tumor growth, metastasis and angiogenesis

scientific article

CHOP proteins into structural domain-like fragments

scientific article

CHOP: parsing proteins into structural domains

scientific article published on July 2004

COP1 is a tumour suppressor that causes degradation of ETS transcription factors

scientific article published on 15 May 2011

Comparing function and structure between entire proteomes

scientific article published on October 2001

Comparisons of NMR spectral quality and success in crystallization demonstrate that NMR and X-ray crystallography are complementary methods for small protein structure determination.

scientific article

Deletion of Asxl1 results in myelodysplasia and severe developmental defects in vivo

scientific article

Deubiquitinase USP37 is activated by CDK2 to antagonize APC(CDH1) and promote S phase entry

scientific article

Deubiquitinase USP9X stabilizes MCL1 and promotes tumour cell survival

scientific article

Distinct involvement of the Gab1 and Grb2 adaptor proteins in signal transduction by the related receptor tyrosine kinases RON and MET.

scientific article published on 22 July 2011

Distinguishing protein-coding from non-coding RNAs through support vector machines

scientific article

Diverse modes of genomic alteration in hepatocellular carcinoma

scientific article

Domains, motifs and clusters in the protein universe

scientific article

Entospletinib in Combination With Induction Chemotherapy in Previously Untreated Acute Myeloid Leukemia: Response and Predictive Significance of HOXA9 and MEIS1 expression

scientific article published on 20 August 2020

Evaluation of EML4-ALK fusion proteins in non-small cell lung cancer using small molecule inhibitors

scientific article

FGFR3 stimulates stearoyl CoA desaturase 1 activity to promote bladder tumor growth

scientific article

Host genetic background impacts modulation of the TLR4 pathway by RON in tissue-associated macrophages

scientific article published on 02 July 2013

Inferring disease and gene set associations with rank coherence in networks

scientific article published on 8 August 2011

Integrated exome and transcriptome sequencing reveals ZAK isoform usage in gastric cancer

scientific article published on 8 May 2014

Integrative analysis of two cell lines derived from a non-small-lung cancer patient--a panomics approach

scientific article published on January 2014

Large-scale integrative network-based analysis identifies common pathways disrupted by copy number alterations across cancers

scientific article

Loopy proteins appear conserved in evolution

scientific article published in September 2002

Loss of the tumor suppressor BAP1 causes myeloid transformation

scientific article published on 09 August 2012

MBASED: allele-specific expression detection in cancer tissues and cell lines

scientific article

Membrane protein prediction methods

scientific article

Microphthalmia-associated transcription factor is a critical transcriptional regulator of melanoma inhibitor of apoptosis in melanomas

scientific article

NMR and X-RAY structures of human E2-like ubiquitin-fold modifier conjugating enzyme 1 (UFC1) reveal structural and functional conservation in the metazoan UFM1-UBA5-UFC1 ubiquination pathway

scientific article

NORSp: Predictions of long regions without regular secondary structure

scientific article

Natively unstructured loops differ from other loops

scientific article

Natural selection of protein structural and functional properties: a single nucleotide polymorphism perspective

scientific article published on 08 April 2008

Non-canonical inflammasome activation targets caspase-11

scientific journal article

Novel leverage of structural genomics

scientific article published in August 2007

PEP: Predictions for Entire Proteomes

scientific article

Phosphorylation and linear ubiquitin direct A20 inhibition of inflammation

scientific article published on 9 December 2015

Phosphorylation of Dishevelled by protein kinase RIPK4 regulates Wnt signaling

scientific article

Phosphorylation of NLRC4 is critical for inflammasome activation

scientific journal article

Predicting transmembrane beta-barrels in proteomes

scientific article

Proline Starvation Induces Unresolved ER Stress and Hinders mTORC1-Dependent Tumorigenesis

scientific article published on 03 September 2016

Regulation of proximal T cell receptor signaling and tolerance induction by deubiquitinase Usp9X.

scientific article

Repression of Stress-Induced LINE-1 Expression Protects Cancer Cell Subpopulations from Lethal Drug Exposure

scientific article published on 24 July 2017

Sensitivity to antitubulin chemotherapeutics is regulated by MCL1 and FBW7.

scientific article published on March 2011

Sequence-based prediction of protein domains.

scientific article

Single-cell RNA sequencing identifies distinct mouse medial ganglionic eminence cell types

scientific article published on 31 March 2017

Solution NMR structure of Escherichia coli ytfP expands the structural coverage of the UPF0131 protein domain family

scientific article

Solution NMR structure of the 30S ribosomal protein S28E fromPyrococcus horikoshii

scientific article

Solution NMR structure of the SOS response protein YnzC from Bacillus subtilis

scientific article

Solution NMR structure of the ribosomal protein RP-L35Ae from Pyrococcus furiosus

scientific article

Solution structure of Archaeglobus fulgidis peptidyl-tRNA hydrolase (Pth2) provides evidence for an extensive conserved family of Pth2 enzymes in archea, bacteria, and eukaryotes

scientific article

Structural genomics is the largest contributor of novel structural leverage

scientific article published on 05 February 2009

Target space for structural genomics revisited

scientific article published in July 2002

The 2.35 A structure of the TenA homolog from Pyrococcus furiosus supports an enzymatic function in thiamine metabolism

scientific article

The PredictProtein server.

scientific article

The effects of hepatitis B virus integration into the genomes of hepatocellular carcinoma patients.

scientific article published on 20 January 2012

The genome of M. acetivorans reveals extensive metabolic and physiological diversity

scientific article

The mutation spectrum revealed by paired genome sequences from a lung cancer patient

scientific article

The protein target list of the Northeast Structural Genomics Consortium

scientific article published in August 2004

Transcription factor Etv5 is essential for the maintenance of alveolar type II cells

scientific article

Tumor suppressor BAP1 is essential for thymic development and proliferative responses of T lymphocytes.

scientific article published in April 2018

USP1 deubiquitinates ID proteins to preserve a mesenchymal stem cell program in osteosarcoma

scientific journal article

Understanding the physical properties that control protein crystallization by analysis of large-scale experimental data.

scientific article

β-Cell Insulin Secretion Requires the Ubiquitin Ligase COP1.

scientific article published on 24 November 2015

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