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List of works by Pablo Moreno

A New Model for Brain Tumor Detection Using Ensemble Transfer Learning and Quantum Variational Classifier

scientific article published in 2022

A database for chemical proteomics: ChEBI.

scientific article

A proteomics sample metadata representation for multiomics integration and big data analysis

scientific article published in 2021

Approaches for containerized scientific workflows in cloud environments with applications in life science

Automated assembly of species metabolomes through data submission into a public repository

scientific article published in August 2017

Automated structure prediction of trans-acyltransferase polyketide synthase products ⬇️

scientific article published on 15 July 2019

BiNChE: a web tool and library for chemical enrichment analysis based on the ChEBI ontology

scientific article

BioContainers: An open-source and community-driven framework for software standardization

scientific article

Computational tools and workflows in metabolomics: An international survey highlights the opportunity for harmonisation through Galaxy

scientific article

Emergence and spread of a human-transmissible multidrug-resistant nontuberculous mycobacterium

scientific article published in November 2016

Expanding natural product chemistry resources at the EBI

article

Expression Atlas update: from tissues to single cells

scientific article published on 01 January 2020

Expression Atlas update: gene and protein expression in multiple species

scientific article published on 19 November 2021

Functional SNP allele discovery (fSNPd): an approach to find highly penetrant, environmental-triggered genotypes underlying complex human phenotypes

scientific article published on 4 December 2017

Galaxy-Kubernetes integration: scaling bioinformatics workflows in the cloud

Genes encoding novel secreted and transmembrane proteins are temporally and spatially regulated during Drosophila melanogaster embryogenesis

scientific article

Genome wide identification of Acidithiobacillus ferrooxidans (ATCC 23270) transcription factors and comparative analysis of ArsR and MerR metal regulators

scientific article published on 10 August 2011

High-Definition Analysis of Host Protein Stability during Human Cytomegalovirus Infection Reveals Antiviral Factors and Viral Evasion Mechanisms

scientific article published on 16 August 2018

ISA API: An open platform for interoperable life science experimental metadata

scientific article published on 16 September 2021

Integrated view and comparative analysis of baseline protein expression in mouse and rat tissues

scientific article published on 17 June 2022

Interoperable and scalable data analysis with microservices: Applications in Metabolomics

LipidHome: a database of theoretical lipids optimized for high throughput mass spectrometry lipidomics

scientific article published on 7 May 2013

MetaboLights: An Open-Access Database Repository for Metabolomics Data

scientific article

Mutations in mitochondrial DNA causing tubulointerstitial kidney disease.

scientific article

Natural product-likeness score revisited: an open-source, open-data implementation

scientific article (publication date: 20 May 2012)

Navigating freely-available software tools for metabolomics analysis

scientific article

PDLIM5 links kidney anion exchanger 1 (kAE1) to ILK and is required for membrane targeting of kAE1.

scientific article published on 03 January 2017

PhenoMeNal: Processing and analysis of Metabolomics data in the Cloud

PhenoMeNal: Processing and analysis of Metabolomics data in the Cloud

scholarly article by Kristian Peters et al published 7 December 2018 in GigaScience

Putative cell type discovery from single-cell gene expression data

scientific article published on 18 May 2020

Recommendations for the packaging and containerizing of bioinformatics software

Scalable Data Analysis in Proteomics and Metabolomics Using BioContainers and Workflows Engines

scientific article published on 28 October 2019

Scalable data analysis in proteomics and metabolomics using BioContainers and workflows engines

Towards automated metabolome assembly: application of text mining to correlate small molecules, targets and tissues

UCSC Cell Browser: visualize your single-cell data

scientific article

Urinary Exosomes Contain MicroRNAs Capable of Paracrine Modulation of Tubular Transporters in Kidney

scientific article

mzML2ISA & nmrML2ISA: generating enriched ISA-Tab metadata files from metabolomics XML data

scientific article

p13CMFA: Parsimonious 13C metabolic flux analysis

scientific article published on 06 September 2019

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